RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 NLRP7Q8WX94 980 aa11.17□□□□□ -0.62
CCDC172-201ENST00000333254 MTBPQ96DY7 904 aa11.17□□□□□ -0.62
CCDC172-201ENST00000333254 PAIP2Q9BPZ3 127 aaKnown RBP11.17□□□□□ -0.62
CCDC172-201ENST00000333254 SNRNP25Q9BV90 132 aaKnown RBP11.17□□□□□ -0.62
CCDC172-201ENST00000333254 TUT1Q9H6E5 874 aaKnown RBP11.17□□□□□ -0.62
CCDC172-201ENST00000333254 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.17□□□□□ -0.62
CCDC172-201ENST00000333254 SLC5A4Q9NY91 659 aa11.17□□□□□ -0.62
CCDC172-201ENST00000333254 CNTN3Q9P232 1028 aa11.17□□□□□ -0.62
CCDC172-201ENST00000333254 BAIAP2L1Q9UHR4 511 aa11.17□□□□□ -0.62
CCDC172-201ENST00000333254 MCM8Q9UJA3 840 aa11.17□□□□□ -0.62
CCDC172-201ENST00000333254 CHMP2BQ9UQN3 213 aa11.17□□□□□ -0.62
CCDC172-201ENST00000333254 TTLL3Q9Y4R7 772 aa11.17□□□□□ -0.62
CCDC172-201ENST00000333254 IKBKGQ9Y6K9 419 aa11.17□□□□□ -0.62
CCDC172-201ENST00000333254 SF3B1O75533 1304 aaKnown RBP eCLIP11.17□□□□□ -0.62
CCDC172-201ENST00000333254 HACD1B0YJ81 288 aa11.17□□□□□ -0.62
CCDC172-201ENST00000333254 PAPSS1O43252 624 aaPredicted RBP11.17□□□□□ -0.62
CCDC172-201ENST00000333254 DNAJC6O75061 913 aa11.17□□□□□ -0.62
CCDC172-201ENST00000333254 KRT37O76014 449 aa11.17□□□□□ -0.62
CCDC172-201ENST00000333254 VTNP04004 478 aa11.17□□□□□ -0.62
CCDC172-201ENST00000333254 ATP5BP06576 529 aaKnown RBP11.17□□□□□ -0.62
CCDC172-201ENST00000333254 KRT16P08779 473 aa11.17□□□□□ -0.62
CCDC172-201ENST00000333254 ADRA1DP25100 572 aa11.17□□□□□ -0.62
CCDC172-201ENST00000333254 PSMC4P43686 418 aa11.17□□□□□ -0.62
CCDC172-201ENST00000333254 CCNG1P51959 295 aa11.17□□□□□ -0.62
CCDC172-201ENST00000333254 BCAT1P54687 386 aa11.17□□□□□ -0.62
CCDC172-201ENST00000333254 CDK16Q00536 496 aa11.17□□□□□ -0.62
CCDC172-201ENST00000333254 ADCY1Q08828 1119 aa11.17□□□□□ -0.62
CCDC172-201ENST00000333254 ORC1Q13415 861 aa11.17□□□□□ -0.62
CCDC172-201ENST00000333254 EFTUD2Q15029 972 aaKnown RBP eCLIP11.17□□□□□ -0.62
CCDC172-201ENST00000333254 C15orf59Q2T9L4 293 aaPredicted RBP11.17□□□□□ -0.62
CCDC172-201ENST00000333254 HP1BP3Q5SSJ5 553 aaPredicted RBP11.17□□□□□ -0.62
CCDC172-201ENST00000333254 MARCH8Q5T0T0 291 aa11.17□□□□□ -0.62
CCDC172-201ENST00000333254 PPP1R26Q5T8A7 1209 aaPredicted RBP11.17□□□□□ -0.62
CCDC172-201ENST00000333254 PMF1Q6P1K2 205 aa11.17□□□□□ -0.62
CCDC172-201ENST00000333254 ALKAL1Q6UXT8 129 aa11.17□□□□□ -0.62
CCDC172-201ENST00000333254 STRADAQ7RTN6 431 aa11.17□□□□□ -0.62
CCDC172-201ENST00000333254 PNMA8AQ86V59 439 aaPredicted RBP11.17□□□□□ -0.62
CCDC172-201ENST00000333254 HACE1Q8IYU2 909 aa11.17□□□□□ -0.62
CCDC172-201ENST00000333254 FAM172AQ8WUF8 416 aa11.17□□□□□ -0.62
CCDC172-201ENST00000333254 ERP27Q96DN0 273 aa11.17□□□□□ -0.62
CCDC172-201ENST00000333254 ZNF668Q96K58 619 aaPredicted RBP11.17□□□□□ -0.62
CCDC172-201ENST00000333254 HSFY1Q96LI6 401 aa11.17□□□□□ -0.62
CCDC172-201ENST00000333254 ADAMTS10Q9H324 1103 aa11.17□□□□□ -0.62
CCDC172-201ENST00000333254 NRDE2Q9H7Z3 1164 aa11.17□□□□□ -0.62
CCDC172-201ENST00000333254 POPDC2Q9HBU9 364 aa11.17□□□□□ -0.62
CCDC172-201ENST00000333254 XAB2Q9HCS7 855 aaKnown RBP11.17□□□□□ -0.62
CCDC172-201ENST00000333254 SLCO1B3Q9NPD5 702 aa11.17□□□□□ -0.62
CCDC172-201ENST00000333254 ETNK2Q9NVF9 386 aa11.17□□□□□ -0.62
CCDC172-201ENST00000333254 GDAP2Q9NXN4 497 aa11.17□□□□□ -0.62
CCDC172-201ENST00000333254 UBQLN1Q9UMX0 589 aaKnown RBP11.17□□□□□ -0.62
CCDC172-201ENST00000333254 KCNN4O15554 427 aa11.16□□□□□ -0.62
CCDC172-201ENST00000333254 XPOTO43592 962 aaKnown RBP11.16□□□□□ -0.62
CCDC172-201ENST00000333254 LPXNO60711 386 aa11.16□□□□□ -0.62
CCDC172-201ENST00000333254 CD4P01730 458 aa11.16□□□□□ -0.62
CCDC172-201ENST00000333254 MMP3P08254 477 aa11.16□□□□□ -0.62
CCDC172-201ENST00000333254 SNRPAP09012 282 aaKnown RBP11.16□□□□□ -0.62
CCDC172-201ENST00000333254 MLNP12872 115 aa11.16□□□□□ -0.62
CCDC172-201ENST00000333254 CNTFP26441 200 aa11.16□□□□□ -0.62
CCDC172-201ENST00000333254 ADORA2AP29274 412 aa11.16□□□□□ -0.62
CCDC172-201ENST00000333254 PNPLA4P41247 253 aa11.16□□□□□ -0.62
CCDC172-201ENST00000333254 SERPINB9P50453 376 aa11.16□□□□□ -0.62
CCDC172-201ENST00000333254 HDAC4P56524 1084 aa11.16□□□□□ -0.62
CCDC172-201ENST00000333254 ATP11AP98196 1134 aa11.16□□□□□ -0.62
CCDC172-201ENST00000333254 BST2Q10589 180 aaKnown RBP11.16□□□□□ -0.62
CCDC172-201ENST00000333254 KBTBD12Q3ZCT8 623 aa11.16□□□□□ -0.62
CCDC172-201ENST00000333254 XKR4Q5GH76 650 aa11.16□□□□□ -0.62
CCDC172-201ENST00000333254 SH3PXD2AQ5TCZ1 1133 aa11.16□□□□□ -0.62
CCDC172-201ENST00000333254 NOTUMQ6P988 496 aa11.16□□□□□ -0.62
CCDC172-201ENST00000333254 NPNTQ6UXI9 565 aa11.16□□□□□ -0.62
CCDC172-201ENST00000333254 DLK2Q6UY11 383 aa11.16□□□□□ -0.62
CCDC172-201ENST00000333254 CAPN12Q6ZSI9 719 aa11.16□□□□□ -0.62
CCDC172-201ENST00000333254 BZW1Q7L1Q6 419 aaKnown RBP11.16□□□□□ -0.62
CCDC172-201ENST00000333254 NLRP9Q7RTR0 991 aa11.16□□□□□ -0.62
CCDC172-201ENST00000333254 ZC3H18Q86VM9 953 aaKnown RBP11.16□□□□□ -0.62
CCDC172-201ENST00000333254 LRRC6Q86X45 466 aa11.16□□□□□ -0.62
CCDC172-201ENST00000333254 IGDCC3Q8IVU1 814 aa11.16□□□□□ -0.62
CCDC172-201ENST00000333254 ANKRD52Q8NB46 1076 aa11.16□□□□□ -0.62
CCDC172-201ENST00000333254 SPOCK2Q92563 424 aa11.16□□□□□ -0.62
CCDC172-201ENST00000333254 ZBTB10Q96DT7 871 aa11.16□□□□□ -0.62
CCDC172-201ENST00000333254 PIWIL1Q96J94 861 aaKnown RBP11.16□□□□□ -0.62
CCDC172-201ENST00000333254 QKIQ96PU8 341 aaKnown RBP eCLIP11.16□□□□□ -0.62
CCDC172-201ENST00000333254 TRIM55Q9BYV6 548 aa11.16□□□□□ -0.62
CCDC172-201ENST00000333254 GCOM2Q9BZD3 368 aaPredicted RBP11.16□□□□□ -0.62
CCDC172-201ENST00000333254 MANSC1Q9H8J5 431 aa11.16□□□□□ -0.62
CCDC172-201ENST00000333254 C10orf88Q9H8K7 445 aa11.16□□□□□ -0.62
CCDC172-201ENST00000333254 RAB6BQ9NRW1 208 aa11.16□□□□□ -0.62
CCDC172-201ENST00000333254 NOP53Q9NZM5 478 aaKnown RBP11.16□□□□□ -0.62
CCDC172-201ENST00000333254 SMIM35A0A1B0GVV1 85 aa11.15□□□□□ -0.62
CCDC172-201ENST00000333254 E7ENQ6 273 aa11.15□□□□□ -0.62
CCDC172-201ENST00000333254 APOEP02649 317 aa11.15□□□□□ -0.62
CCDC172-201ENST00000333254 FGFR1P11362 822 aa11.15□□□□□ -0.62
CCDC172-201ENST00000333254 HOXA11P31270 313 aaPredicted RBP11.15□□□□□ -0.62
CCDC172-201ENST00000333254 L1CAMP32004 1257 aa11.15□□□□□ -0.62
CCDC172-201ENST00000333254 NAB1Q13506 487 aa11.15□□□□□ -0.62
CCDC172-201ENST00000333254 SEMA5AQ13591 1074 aa11.15□□□□□ -0.62
CCDC172-201ENST00000333254 R3HDM1Q15032 1099 aaKnown RBP11.15□□□□□ -0.62
CCDC172-201ENST00000333254 PRKD1Q15139 912 aaPredicted RBP11.15□□□□□ -0.62
CCDC172-201ENST00000333254 STXBP5Q5T5C0 1151 aa11.15□□□□□ -0.62
CCDC172-201ENST00000333254 IQSEC1Q6DN90 963 aa11.15□□□□□ -0.62
CCDC172-201ENST00000333254 CAND1Q86VP6 1230 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms