RNA–Protein interactions for RNA: ENST00000332772.4

SIMC1-201, Transcript of SUMO interacting motifs containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIMC1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1-201ENST00000332772 CCDC25Q86WR0 208 aa9.42□□□□□ -0.9
SIMC1-201ENST00000332772 SPATS2Q86XZ4 545 aaKnown RBP9.42□□□□□ -0.9
SIMC1-201ENST00000332772 PLD5Q8N7P1 536 aa9.42□□□□□ -0.9
SIMC1-201ENST00000332772 MYCBPAPQ8TBZ2 947 aa9.42□□□□□ -0.9
SIMC1-201ENST00000332772 RSPH1Q8WYR4 309 aa9.42□□□□□ -0.9
SIMC1-201ENST00000332772 IRGQQ8WZA9 623 aa9.42□□□□□ -0.9
SIMC1-201ENST00000332772 PGAP3Q96FM1 320 aaPredicted RBP9.42□□□□□ -0.9
SIMC1-201ENST00000332772 CAPNS2Q96L46 248 aa9.42□□□□□ -0.9
SIMC1-201ENST00000332772 GLT1D1Q96MS3 346 aa9.42□□□□□ -0.9
SIMC1-201ENST00000332772 RBM15Q96T37 977 aaKnown RBP eCLIP9.42□□□□□ -0.9
SIMC1-201ENST00000332772 SYT15Q9BQS2 421 aa9.42□□□□□ -0.9
SIMC1-201ENST00000332772 TMEM121Q9BTD3 319 aa9.42□□□□□ -0.9
SIMC1-201ENST00000332772 SNRNP25Q9BV90 132 aaKnown RBP9.42□□□□□ -0.9
SIMC1-201ENST00000332772 TMEM121BQ9BXQ6 578 aaPredicted RBP9.42□□□□□ -0.9
SIMC1-201ENST00000332772 EPN3Q9H201 632 aa9.42□□□□□ -0.9
SIMC1-201ENST00000332772 LRRC4Q9HBW1 653 aa9.42□□□□□ -0.9
SIMC1-201ENST00000332772 CSNK1G1Q9HCP0 422 aa9.42□□□□□ -0.9
SIMC1-201ENST00000332772 NINJ2Q9NZG7 142 aa9.42□□□□□ -0.9
SIMC1-201ENST00000332772 TSC2P49815 1807 aa9.42□□□□□ -0.9
SIMC1-201ENST00000332772 A0A087WUV0 522 aaPredicted RBP9.41□□□□□ -0.9
SIMC1-201ENST00000332772 HACD1B0YJ81 288 aa9.41□□□□□ -0.9
SIMC1-201ENST00000332772 E7EVH7 732 aa9.41□□□□□ -0.9
SIMC1-201ENST00000332772 SNPHO15079 494 aa9.41□□□□□ -0.9
SIMC1-201ENST00000332772 CDH16O75309 829 aa9.41□□□□□ -0.9
SIMC1-201ENST00000332772 CD48P09326 243 aa9.41□□□□□ -0.9
SIMC1-201ENST00000332772 TKTP29401 623 aaKnown RBP9.41□□□□□ -0.9
SIMC1-201ENST00000332772 CD52P31358 61 aa9.41□□□□□ -0.9
SIMC1-201ENST00000332772 L1CAMP32004 1257 aa9.41□□□□□ -0.9
SIMC1-201ENST00000332772 LSP1P33241 339 aa9.41□□□□□ -0.9
SIMC1-201ENST00000332772 MAGEA6P43360 314 aa9.41□□□□□ -0.9
SIMC1-201ENST00000332772 CLCNKBP51801 687 aa9.41□□□□□ -0.9
SIMC1-201ENST00000332772 ARL4CP56559 192 aa9.41□□□□□ -0.9
SIMC1-201ENST00000332772 BCAR1P56945 870 aa9.41□□□□□ -0.9
SIMC1-201ENST00000332772 MAGOHP61326 146 aaKnown RBP9.41□□□□□ -0.9
SIMC1-201ENST00000332772 FAM189BP81408 668 aa9.41□□□□□ -0.9
SIMC1-201ENST00000332772 ATP11AP98196 1134 aa9.41□□□□□ -0.9
SIMC1-201ENST00000332772 ADCY1Q08828 1119 aa9.41□□□□□ -0.9
SIMC1-201ENST00000332772 TRIM32Q13049 653 aa9.41□□□□□ -0.9
SIMC1-201ENST00000332772 SH3PXD2AQ5TCZ1 1133 aa9.41□□□□□ -0.9
SIMC1-201ENST00000332772 FAM171BQ6P995 826 aa9.41□□□□□ -0.9
SIMC1-201ENST00000332772 DCLRE1AQ6PJP8 1040 aa9.41□□□□□ -0.9
SIMC1-201ENST00000332772 PAXIP1Q6ZW49 1069 aaPredicted RBP9.41□□□□□ -0.9
SIMC1-201ENST00000332772 SPNS2Q8IVW8 549 aa9.41□□□□□ -0.9
SIMC1-201ENST00000332772 NAT8LQ8N9F0 302 aa9.41□□□□□ -0.9
SIMC1-201ENST00000332772 PRCCQ92733 491 aaPredicted RBP9.41□□□□□ -0.9
SIMC1-201ENST00000332772 NTAN1Q96AB6 310 aa9.41□□□□□ -0.9
SIMC1-201ENST00000332772 ACSF2Q96CM8 615 aaPredicted RBP9.41□□□□□ -0.9
SIMC1-201ENST00000332772 SMARCD1Q96GM5 515 aa9.41□□□□□ -0.9
SIMC1-201ENST00000332772 NPY6RQ99463 290 aa9.41□□□□□ -0.9
SIMC1-201ENST00000332772 FTHL17Q9BXU8 183 aa9.41□□□□□ -0.9
SIMC1-201ENST00000332772 B3GNT5Q9BYG0 378 aa9.41□□□□□ -0.9
SIMC1-201ENST00000332772 CENPHQ9H3R5 247 aa9.41□□□□□ -0.9
SIMC1-201ENST00000332772 POPDC2Q9HBU9 364 aa9.41□□□□□ -0.9
SIMC1-201ENST00000332772 RGS18Q9NS28 235 aa9.41□□□□□ -0.9
SIMC1-201ENST00000332772 MIOSQ9NXC5 875 aa9.41□□□□□ -0.9
SIMC1-201ENST00000332772 PAK5Q9P286 719 aa9.41□□□□□ -0.9
SIMC1-201ENST00000332772 GGA2Q9UJY4 613 aa9.41□□□□□ -0.9
SIMC1-201ENST00000332772 NOD1Q9Y239 953 aa9.41□□□□□ -0.9
SIMC1-201ENST00000332772 RAD54BQ9Y620 910 aa9.41□□□□□ -0.9
SIMC1-201ENST00000332772 FRMPD3Q5JV73 1810 aa9.41□□□□□ -0.9
SIMC1-201ENST00000332772 TMEM189-UBE2V1I3L0A0 370 aa9.4□□□□□ -0.9
SIMC1-201ENST00000332772 CHADO15335 359 aa9.4□□□□□ -0.9
SIMC1-201ENST00000332772 GRAP2O75791 330 aa9.4□□□□□ -0.9
SIMC1-201ENST00000332772 F9P00740 461 aa9.4□□□□□ -0.9
SIMC1-201ENST00000332772 CTSHP09668 335 aa9.4□□□□□ -0.9
SIMC1-201ENST00000332772 LCP1P13796 627 aa9.4□□□□□ -0.9
SIMC1-201ENST00000332772 PECAM1P16284 738 aaPredicted RBP9.4□□□□□ -0.9
SIMC1-201ENST00000332772 RPL22P35268 128 aaKnown RBP9.4□□□□□ -0.9
SIMC1-201ENST00000332772 SCNN1GP51170 649 aa9.4□□□□□ -0.9
SIMC1-201ENST00000332772 TAF5Q15542 800 aa9.4□□□□□ -0.9
SIMC1-201ENST00000332772 KYNUQ16719 465 aa9.4□□□□□ -0.9
SIMC1-201ENST00000332772 CDO1Q16878 200 aa9.4□□□□□ -0.9
SIMC1-201ENST00000332772 SCYL2Q6P3W7 929 aa9.4□□□□□ -0.9
SIMC1-201ENST00000332772 ECHDC2Q86YB7 292 aa9.4□□□□□ -0.9
SIMC1-201ENST00000332772 CDKL3Q8IVW4 592 aaPredicted RBP9.4□□□□□ -0.9
SIMC1-201ENST00000332772 SIX6OS1Q8N1H7 587 aa9.4□□□□□ -0.9
SIMC1-201ENST00000332772 PQLC3Q8N755 202 aa9.4□□□□□ -0.9
SIMC1-201ENST00000332772 ADAM2Q99965 735 aa9.4□□□□□ -0.9
SIMC1-201ENST00000332772 CCDC134Q9H6E4 229 aa9.4□□□□□ -0.9
SIMC1-201ENST00000332772 NRDE2Q9H7Z3 1164 aa9.4□□□□□ -0.9
SIMC1-201ENST00000332772 CRTAC1Q9NQ79 661 aa9.4□□□□□ -0.9
SIMC1-201ENST00000332772 BCCIPQ9P287 314 aaKnown RBP eCLIP9.4□□□□□ -0.9
SIMC1-201ENST00000332772 KANSL3Q9P2N6 904 aa9.4□□□□□ -0.9
SIMC1-201ENST00000332772 SPAG6O75602 509 aa9.4□□□□□ -0.91
SIMC1-201ENST00000332772 GHRP10912 638 aa9.4□□□□□ -0.91
SIMC1-201ENST00000332772 PHBP35232 272 aa9.4□□□□□ -0.91
SIMC1-201ENST00000332772 ARL4AP40617 200 aa9.4□□□□□ -0.91
SIMC1-201ENST00000332772 HCAR3P49019 387 aa9.4□□□□□ -0.91
SIMC1-201ENST00000332772 CTCFP49711 727 aaPredicted RBP9.4□□□□□ -0.91
SIMC1-201ENST00000332772 VPS41P49754 854 aa9.4□□□□□ -0.91
SIMC1-201ENST00000332772 SLC18A1P54219 525 aa9.4□□□□□ -0.91
SIMC1-201ENST00000332772 DYNLT1P63172 113 aa9.4□□□□□ -0.91
SIMC1-201ENST00000332772 ADIGQ0VDE8 80 aa9.4□□□□□ -0.91
SIMC1-201ENST00000332772 SCAPQ12770 1279 aa9.4□□□□□ -0.91
SIMC1-201ENST00000332772 HIF1AQ16665 826 aa9.4□□□□□ -0.91
SIMC1-201ENST00000332772 ZC3H12AQ5D1E8 599 aaKnown RBP9.4□□□□□ -0.91
SIMC1-201ENST00000332772 MDH1BQ5I0G3 518 aa9.4□□□□□ -0.91
SIMC1-201ENST00000332772 DARS2Q6PI48 645 aaKnown RBP9.4□□□□□ -0.91
SIMC1-201ENST00000332772 SLC24A5Q71RS6 500 aa9.4□□□□□ -0.91
SIMC1-201ENST00000332772 FAM35AQ86V20 835 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms