RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 C1QBPQ07021 282 aaKnown RBP16.82■□□□□ 0.28
LRRC28-202ENST00000331450 FAM78AQ5JUQ0 283 aa16.82■□□□□ 0.28
LRRC28-202ENST00000331450 HECTD3Q5T447 861 aa16.82■□□□□ 0.28
LRRC28-202ENST00000331450 BSPRYQ5W0U4 402 aa16.82■□□□□ 0.28
LRRC28-202ENST00000331450 KLHDC10Q6PID8 442 aa16.82■□□□□ 0.28
LRRC28-202ENST00000331450 TOGARAM2Q6ZUX3 1019 aa16.82■□□□□ 0.28
LRRC28-202ENST00000331450 BEND5Q7L4P6 421 aa16.82■□□□□ 0.28
LRRC28-202ENST00000331450 SLC26A9Q7LBE3 791 aa16.82■□□□□ 0.28
LRRC28-202ENST00000331450 ZSCAN18Q8TBC5 510 aaPredicted RBP16.82■□□□□ 0.28
LRRC28-202ENST00000331450 SMARCD2Q92925 531 aa16.82■□□□□ 0.28
LRRC28-202ENST00000331450 KHSRPQ92945 711 aaKnown RBP eCLIP16.82■□□□□ 0.28
LRRC28-202ENST00000331450 RPGRIP1Q96KN7 1286 aa16.82■□□□□ 0.28
LRRC28-202ENST00000331450 RNF38Q9H0F5 515 aa16.82■□□□□ 0.28
LRRC28-202ENST00000331450 ISCUQ9H1K1 167 aa16.82■□□□□ 0.28
LRRC28-202ENST00000331450 SLITRK6Q9H5Y7 841 aa16.82■□□□□ 0.28
LRRC28-202ENST00000331450 SYNCQ9H7C4 482 aa16.82■□□□□ 0.28
LRRC28-202ENST00000331450 TRPC7Q9HCX4 862 aa16.82■□□□□ 0.28
LRRC28-202ENST00000331450 SPTBN5Q9NRC6 3674 aaKnown RBP16.82■□□□□ 0.28
LRRC28-202ENST00000331450 TRAV19A0A0A6YYK7 116 aa16.81■□□□□ 0.28
LRRC28-202ENST00000331450 TCRBV5S1A1TA0A578 114 aa16.81■□□□□ 0.28
LRRC28-202ENST00000331450 ANHXE9PGG2 379 aa16.81■□□□□ 0.28
LRRC28-202ENST00000331450 RTN2O75298 545 aa16.81■□□□□ 0.28
LRRC28-202ENST00000331450 ABL1P00519 1130 aa16.81■□□□□ 0.28
LRRC28-202ENST00000331450 CALB1P05937 261 aa16.81■□□□□ 0.28
LRRC28-202ENST00000331450 RARGP13631 454 aa16.81■□□□□ 0.28
LRRC28-202ENST00000331450 SLC7A9P82251 487 aa16.81■□□□□ 0.28
LRRC28-202ENST00000331450 SLC6A3Q01959 620 aa16.81■□□□□ 0.28
LRRC28-202ENST00000331450 HTR4Q13639 388 aa16.81■□□□□ 0.28
LRRC28-202ENST00000331450 ZNF268Q14587 947 aaPredicted RBP16.81■□□□□ 0.28
LRRC28-202ENST00000331450 TAF5Q15542 800 aa16.81■□□□□ 0.28
LRRC28-202ENST00000331450 SLC18A3Q16572 532 aa16.81■□□□□ 0.28
LRRC28-202ENST00000331450 OR6B2Q6IFH4 312 aa16.81■□□□□ 0.28
LRRC28-202ENST00000331450 MSANTD2Q6P1R3 559 aa16.81■□□□□ 0.28
LRRC28-202ENST00000331450 TMEM139Q8IV31 216 aa16.81■□□□□ 0.28
LRRC28-202ENST00000331450 MCOLN2Q8IZK6 566 aa16.81■□□□□ 0.28
LRRC28-202ENST00000331450 PLCD3Q8N3E9 789 aa16.81■□□□□ 0.28
LRRC28-202ENST00000331450 ARL14EPQ8N8R7 260 aaPredicted RBP16.81■□□□□ 0.28
LRRC28-202ENST00000331450 VCPIP1Q96JH7 1222 aa16.81■□□□□ 0.28
LRRC28-202ENST00000331450 ZFRQ96KR1 1074 aaKnown RBP16.81■□□□□ 0.28
LRRC28-202ENST00000331450 CYP2S1Q96SQ9 504 aa16.81■□□□□ 0.28
LRRC28-202ENST00000331450 NHEJ1Q9H9Q4 299 aaPredicted RBP16.81■□□□□ 0.28
LRRC28-202ENST00000331450 ABCC13Q9NSE7 274 aa16.81■□□□□ 0.28
LRRC28-202ENST00000331450 ADAM22Q9P0K1 906 aa16.81■□□□□ 0.28
LRRC28-202ENST00000331450 STRIP2Q9ULQ0 834 aa16.81■□□□□ 0.28
LRRC28-202ENST00000331450 COL4A3Q01955 1670 aa16.81■□□□□ 0.28
LRRC28-202ENST00000331450 TMCO5BA8MYB1 307 aa16.8■□□□□ 0.28
LRRC28-202ENST00000331450 HSF2BPO75031 334 aa16.8■□□□□ 0.28
LRRC28-202ENST00000331450 CKMP06732 381 aa16.8■□□□□ 0.28
LRRC28-202ENST00000331450 RALAP11233 206 aa16.8■□□□□ 0.28
LRRC28-202ENST00000331450 TCF3P15923 654 aa16.8■□□□□ 0.28
LRRC28-202ENST00000331450 HDCP19113 662 aa16.8■□□□□ 0.28
LRRC28-202ENST00000331450 YWHAZP63104 245 aaKnown RBP16.8■□□□□ 0.28
LRRC28-202ENST00000331450 ZXDBP98169 803 aa16.8■□□□□ 0.28
LRRC28-202ENST00000331450 EFHC1Q5JVL4 640 aa16.8■□□□□ 0.28
LRRC28-202ENST00000331450 BTBD8Q5XKL5 378 aa16.8■□□□□ 0.28
LRRC28-202ENST00000331450 ARID3BQ8IVW6 561 aaPredicted RBP16.8■□□□□ 0.28
LRRC28-202ENST00000331450 C3orf20Q8ND61 904 aa16.8■□□□□ 0.28
LRRC28-202ENST00000331450 EDEM1Q92611 657 aa16.8■□□□□ 0.28
LRRC28-202ENST00000331450 FGF14Q92915 247 aa16.8■□□□□ 0.28
LRRC28-202ENST00000331450 USP13Q92995 863 aaPredicted RBP16.8■□□□□ 0.28
LRRC28-202ENST00000331450 FAM149B1Q96BN6 582 aa16.8■□□□□ 0.28
LRRC28-202ENST00000331450 RSPRY1Q96DX4 576 aa16.8■□□□□ 0.28
LRRC28-202ENST00000331450 SLC2A13Q96QE2 648 aa16.8■□□□□ 0.28
LRRC28-202ENST00000331450 CDK5RAP1Q96SZ6 601 aaKnown RBP16.8■□□□□ 0.28
LRRC28-202ENST00000331450 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.8■□□□□ 0.28
LRRC28-202ENST00000331450 TRIM62Q9BVG3 475 aa16.8■□□□□ 0.28
LRRC28-202ENST00000331450 POPDC2Q9HBU9 364 aa16.8■□□□□ 0.28
LRRC28-202ENST00000331450 WDR35Q9P2L0 1181 aa16.8■□□□□ 0.28
LRRC28-202ENST00000331450 TMEM59LQ9UK28 342 aa16.8■□□□□ 0.28
LRRC28-202ENST00000331450 ARHGAP26Q9UNA1 814 aa16.8■□□□□ 0.28
LRRC28-202ENST00000331450 DAB1O75553 588 aa16.79■□□□□ 0.28
LRRC28-202ENST00000331450 TBX18O95935 607 aa16.79■□□□□ 0.28
LRRC28-202ENST00000331450 FTLP02792 175 aaPredicted RBP16.79■□□□□ 0.28
LRRC28-202ENST00000331450 ATP5C1P36542 298 aaKnown RBP16.79■□□□□ 0.28
LRRC28-202ENST00000331450 AVPR1AP37288 418 aa16.79■□□□□ 0.28
LRRC28-202ENST00000331450 GSDMDP57764 484 aa16.79■□□□□ 0.28
LRRC28-202ENST00000331450 GFPT1Q06210 699 aaPredicted RBP16.79■□□□□ 0.28
LRRC28-202ENST00000331450 USP4Q13107 963 aa16.79■□□□□ 0.28
LRRC28-202ENST00000331450 TJAP1Q5JTD0 557 aa16.79■□□□□ 0.28
LRRC28-202ENST00000331450 FAM102AQ5T9C2 384 aaPredicted RBP16.79■□□□□ 0.28
LRRC28-202ENST00000331450 ALKBH5Q6P6C2 394 aaKnown RBP16.79■□□□□ 0.28
LRRC28-202ENST00000331450 PARM1Q6UWI2 310 aa16.79■□□□□ 0.28
LRRC28-202ENST00000331450 MTSS1LQ765P7 747 aa16.79■□□□□ 0.28
LRRC28-202ENST00000331450 ARCQ7LC44 396 aa16.79■□□□□ 0.28
LRRC28-202ENST00000331450 DNAAF5Q86Y56 855 aa16.79■□□□□ 0.28
LRRC28-202ENST00000331450 RIN3Q8TB24 985 aa16.79■□□□□ 0.28
LRRC28-202ENST00000331450 GOLGA1Q92805 767 aa16.79■□□□□ 0.28
LRRC28-202ENST00000331450 SMG9Q9H0W8 520 aaKnown RBP16.79■□□□□ 0.28
LRRC28-202ENST00000331450 KIF9Q9HAQ2 790 aa16.79■□□□□ 0.28
LRRC28-202ENST00000331450 OLA1Q9NTK5 396 aaKnown RBP16.79■□□□□ 0.28
LRRC28-202ENST00000331450 TDP1Q9NUW8 608 aa16.79■□□□□ 0.28
LRRC28-202ENST00000331450 OBP2AQ9NY56 170 aa16.79■□□□□ 0.28
LRRC28-202ENST00000331450 NUDT5Q9UKK9 219 aa16.79■□□□□ 0.28
LRRC28-202ENST00000331450 CCL26Q9Y258 94 aa16.79■□□□□ 0.28
LRRC28-202ENST00000331450 UNC80Q8N2C7 3258 aa16.79■□□□□ 0.28
LRRC28-202ENST00000331450 TICRRQ7Z2Z1 1910 aa16.78■□□□□ 0.28
LRRC28-202ENST00000331450 GOLGA6L6A8MZA4 724 aa16.78■□□□□ 0.28
LRRC28-202ENST00000331450 GOLGA8SH3BPF8 625 aa16.78■□□□□ 0.28
LRRC28-202ENST00000331450 ZNF263O14978 683 aa16.78■□□□□ 0.28
LRRC28-202ENST00000331450 MDM4O15151 490 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms