RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 MTMR10Q9NXD2 777 aa17.68■□□□□ 0.42
DDX41-201ENST00000330503 TRIM17Q9Y577 477 aa17.68■□□□□ 0.42
DDX41-201ENST00000330503 HMGB1P1B2RPK0 211 aaPredicted RBP17.68■□□□□ 0.42
DDX41-201ENST00000330503 KBTBD13C9JR72 458 aa17.68■□□□□ 0.42
DDX41-201ENST00000330503 FYNP06241 537 aa17.68■□□□□ 0.42
DDX41-201ENST00000330503 DESP17661 470 aa17.68■□□□□ 0.42
DDX41-201ENST00000330503 PAX3P23760 479 aa17.68■□□□□ 0.42
DDX41-201ENST00000330503 SYPL2Q5VXT5 272 aa17.68■□□□□ 0.42
DDX41-201ENST00000330503 GLB1LQ6UWU2 654 aa17.68■□□□□ 0.42
DDX41-201ENST00000330503 LRRC8DQ7L1W4 858 aa17.68■□□□□ 0.42
DDX41-201ENST00000330503 VSIG1Q86XK7 387 aa17.68■□□□□ 0.42
DDX41-201ENST00000330503 SIX6OS1Q8N1H7 587 aa17.68■□□□□ 0.42
DDX41-201ENST00000330503 MYLPFQ96A32 169 aa17.68■□□□□ 0.42
DDX41-201ENST00000330503 FAF2Q96CS3 445 aa17.68■□□□□ 0.42
DDX41-201ENST00000330503 SLC2A13Q96QE2 648 aa17.68■□□□□ 0.42
DDX41-201ENST00000330503 TMEM209Q96SK2 561 aa17.68■□□□□ 0.42
DDX41-201ENST00000330503 ULBP1Q9BZM6 244 aa17.68■□□□□ 0.42
DDX41-201ENST00000330503 TSPYL1Q9H0U9 437 aa17.68■□□□□ 0.42
DDX41-201ENST00000330503 TPX2Q9ULW0 747 aaKnown RBP17.68■□□□□ 0.42
DDX41-201ENST00000330503 IFNB1P01574 187 aa17.67■□□□□ 0.42
DDX41-201ENST00000330503 SELPP16109 830 aa17.67■□□□□ 0.42
DDX41-201ENST00000330503 LMAN1P49257 510 aa17.67■□□□□ 0.42
DDX41-201ENST00000330503 DSC1Q08554 894 aa17.67■□□□□ 0.42
DDX41-201ENST00000330503 NOMO1Q15155 1222 aa17.67■□□□□ 0.42
DDX41-201ENST00000330503 DPYSL2Q16555 572 aa17.67■□□□□ 0.42
DDX41-201ENST00000330503 DCAF6Q58WW2 860 aa17.67■□□□□ 0.42
DDX41-201ENST00000330503 INTS6LQ5JSJ4 861 aaKnown RBP17.67■□□□□ 0.42
DDX41-201ENST00000330503 EMC10Q5UCC4 262 aa17.67■□□□□ 0.42
DDX41-201ENST00000330503 SLC9A4Q6AI14 798 aa17.67■□□□□ 0.42
DDX41-201ENST00000330503 C1orf228Q6PIY5 440 aa17.67■□□□□ 0.42
DDX41-201ENST00000330503 B4GALNT4Q76KP1 1039 aa17.67■□□□□ 0.42
DDX41-201ENST00000330503 OR10T2Q8NGX3 314 aa17.67■□□□□ 0.42
DDX41-201ENST00000330503 UHMK1Q8TAS1 419 aaKnown RBP17.67■□□□□ 0.42
DDX41-201ENST00000330503 FAM149B1Q96BN6 582 aa17.67■□□□□ 0.42
DDX41-201ENST00000330503 NPY6RQ99463 290 aa17.67■□□□□ 0.42
DDX41-201ENST00000330503 CENPHQ9H3R5 247 aa17.67■□□□□ 0.42
DDX41-201ENST00000330503 CSNK1G1Q9HCP0 422 aa17.67■□□□□ 0.42
DDX41-201ENST00000330503 SAGE1Q9NXZ1 904 aa17.67■□□□□ 0.42
DDX41-201ENST00000330503 GOLGA6L10A6NI86 522 aa17.66■□□□□ 0.42
DDX41-201ENST00000330503 NBNO60934 754 aa17.66■□□□□ 0.42
DDX41-201ENST00000330503 RBP3P10745 1247 aa17.66■□□□□ 0.42
DDX41-201ENST00000330503 NOS2P35228 1153 aa17.66■□□□□ 0.42
DDX41-201ENST00000330503 RPL22P35268 128 aaKnown RBP17.66■□□□□ 0.42
DDX41-201ENST00000330503 SULT1E1P49888 294 aa17.66■□□□□ 0.42
DDX41-201ENST00000330503 DAOAP59103 153 aa17.66■□□□□ 0.42
DDX41-201ENST00000330503 DMTNQ08495 405 aa17.66■□□□□ 0.42
DDX41-201ENST00000330503 IFFO1Q0D2I5 559 aa17.66■□□□□ 0.42
DDX41-201ENST00000330503 DNAJC21Q5F1R6 531 aaKnown RBP17.66■□□□□ 0.42
DDX41-201ENST00000330503 NOMO2Q5JPE7 1267 aa17.66■□□□□ 0.42
DDX41-201ENST00000330503 RNASEH2BQ5TBB1 312 aaKnown RBP17.66■□□□□ 0.42
DDX41-201ENST00000330503 AGBL2Q5U5Z8 902 aa17.66■□□□□ 0.42
DDX41-201ENST00000330503 FAM126BQ8IXS8 530 aa17.66■□□□□ 0.42
DDX41-201ENST00000330503 KCTD15Q96SI1 283 aaPredicted RBP17.66■□□□□ 0.42
DDX41-201ENST00000330503 DHX35Q9H5Z1 703 aaKnown RBP17.66■□□□□ 0.42
DDX41-201ENST00000330503 DSEQ9UL01 958 aa17.66■□□□□ 0.42
DDX41-201ENST00000330503 YJEFN3A6XGL0 299 aa17.66■□□□□ 0.42
DDX41-201ENST00000330503 ZNF487B1APH4 448 aa17.66■□□□□ 0.42
DDX41-201ENST00000330503 E7ENQ6 273 aa17.66■□□□□ 0.42
DDX41-201ENST00000330503 FBXO21O94952 628 aa17.66■□□□□ 0.42
DDX41-201ENST00000330503 SKOR1P84550 965 aa17.66■□□□□ 0.42
DDX41-201ENST00000330503 KRT71Q3SY84 523 aa17.66■□□□□ 0.42
DDX41-201ENST00000330503 PPP6R3Q5H9R7 873 aaPredicted RBP17.66■□□□□ 0.42
DDX41-201ENST00000330503 OVOS1Q6IE37 1185 aa17.66■□□□□ 0.42
DDX41-201ENST00000330503 ZCCHC9Q8N567 271 aaKnown RBP17.66■□□□□ 0.42
DDX41-201ENST00000330503 ZNF784Q8NCA9 323 aaPredicted RBP17.66■□□□□ 0.42
DDX41-201ENST00000330503 P3H4Q92791 437 aa17.66■□□□□ 0.42
DDX41-201ENST00000330503 SMARCD1Q96GM5 515 aa17.66■□□□□ 0.42
DDX41-201ENST00000330503 ZNF670Q9BS34 389 aa17.66■□□□□ 0.42
DDX41-201ENST00000330503 TMEM109Q9BVC6 243 aa17.66■□□□□ 0.42
DDX41-201ENST00000330503 AP4E1Q9UPM8 1137 aa17.66■□□□□ 0.42
DDX41-201ENST00000330503 NAALADL1Q9UQQ1 740 aa17.66■□□□□ 0.42
DDX41-201ENST00000330503 ENPP3O14638 875 aa17.65■□□□□ 0.42
DDX41-201ENST00000330503 MCF2LO15068 1137 aa17.65■□□□□ 0.42
DDX41-201ENST00000330503 TYMPP19971 482 aa17.65■□□□□ 0.42
DDX41-201ENST00000330503 KYNUQ16719 465 aa17.65■□□□□ 0.42
DDX41-201ENST00000330503 BHLHA9Q7RTU4 235 aa17.65■□□□□ 0.42
DDX41-201ENST00000330503 CTU1Q7Z7A3 348 aaKnown RBP17.65■□□□□ 0.42
DDX41-201ENST00000330503 RELL1Q8IUW5 271 aa17.65■□□□□ 0.42
DDX41-201ENST00000330503 COLGALT2Q8IYK4 626 aa17.65■□□□□ 0.42
DDX41-201ENST00000330503 FAM71DQ8N9W8 422 aa17.65■□□□□ 0.42
DDX41-201ENST00000330503 RSAD2Q8WXG1 361 aa17.65■□□□□ 0.42
DDX41-201ENST00000330503 FOXP3Q9BZS1 431 aa17.65■□□□□ 0.42
DDX41-201ENST00000330503 USP29Q9HBJ7 922 aa17.65■□□□□ 0.42
DDX41-201ENST00000330503 FZD10Q9ULW2 581 aa17.65■□□□□ 0.42
DDX41-201ENST00000330503 APOL1O14791 398 aa17.65■□□□□ 0.42
DDX41-201ENST00000330503 TTC4O95801 387 aa17.65■□□□□ 0.42
DDX41-201ENST00000330503 USP17L7P0C7H9 530 aa17.65■□□□□ 0.42
DDX41-201ENST00000330503 BDNFP23560 247 aa17.65■□□□□ 0.42
DDX41-201ENST00000330503 CYP2F1P24903 491 aa17.65■□□□□ 0.42
DDX41-201ENST00000330503 NRLP54845 237 aa17.65■□□□□ 0.42
DDX41-201ENST00000330503 DARS2Q6PI48 645 aaKnown RBP17.65■□□□□ 0.42
DDX41-201ENST00000330503 FAM131BQ86XD5 332 aa17.65■□□□□ 0.42
DDX41-201ENST00000330503 PYROXD2Q8N2H3 581 aa17.65■□□□□ 0.42
DDX41-201ENST00000330503 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.65■□□□□ 0.42
DDX41-201ENST00000330503 FTHL17Q9BXU8 183 aa17.65■□□□□ 0.42
DDX41-201ENST00000330503 NRDE2Q9H7Z3 1164 aa17.65■□□□□ 0.42
DDX41-201ENST00000330503 POPDC2Q9HBU9 364 aa17.65■□□□□ 0.42
DDX41-201ENST00000330503 CNGB3Q9NQW8 809 aa17.65■□□□□ 0.42
DDX41-201ENST00000330503 TBC1D13Q9NVG8 400 aa17.65■□□□□ 0.42
DDX41-201ENST00000330503 NINJ2Q9NZG7 142 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms