RNA–Protein interactions for RNA: ENST00000328839.3

PPP4R4-202, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

TSL 1 (best) BASIC

Gene PPP4R4, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-202ENST00000328839 IRX4P78413 519 aa26.47■■□□□ 1.83
PPP4R4-202ENST00000328839 TRMT11Q7Z4G4 463 aaKnown RBP26.47■■□□□ 1.83
PPP4R4-202ENST00000328839 UNC93AQ86WB7 457 aa26.47■■□□□ 1.83
PPP4R4-202ENST00000328839 CRYBG2Q8N1P7 616 aa26.47■■□□□ 1.83
PPP4R4-202ENST00000328839 TMC2Q8TDI7 906 aa26.47■■□□□ 1.83
PPP4R4-202ENST00000328839 CALUO43852 315 aaPredicted RBP26.46■■□□□ 1.83
PPP4R4-202ENST00000328839 TBX18O95935 607 aa26.46■■□□□ 1.83
PPP4R4-202ENST00000328839 ASS1P00966 412 aaKnown RBP26.46■■□□□ 1.83
PPP4R4-202ENST00000328839 ASPAP45381 313 aa26.46■■□□□ 1.83
PPP4R4-202ENST00000328839 SHC2P98077 582 aa26.46■■□□□ 1.83
PPP4R4-202ENST00000328839 BYSLQ13895 437 aaKnown RBP26.46■■□□□ 1.83
PPP4R4-202ENST00000328839 UAP1L1Q3KQV9 507 aa26.46■■□□□ 1.83
PPP4R4-202ENST00000328839 TRIM61Q5EBN2 209 aa26.46■■□□□ 1.83
PPP4R4-202ENST00000328839 SH3PXD2AQ5TCZ1 1133 aa26.46■■□□□ 1.83
PPP4R4-202ENST00000328839 TERB1Q8NA31 727 aa26.46■■□□□ 1.83
PPP4R4-202ENST00000328839 IMPG2Q9BZV3 1241 aa26.46■■□□□ 1.83
PPP4R4-202ENST00000328839 CSNK1G1Q9HCP0 422 aa26.46■■□□□ 1.83
PPP4R4-202ENST00000328839 DNAJC17Q9NVM6 304 aaKnown RBP26.46■■□□□ 1.83
PPP4R4-202ENST00000328839 MBD1Q9UIS9 605 aaPredicted RBP26.46■■□□□ 1.83
PPP4R4-202ENST00000328839 PI4KAP42356 2102 aa26.45■■□□□ 1.83
PPP4R4-202ENST00000328839 ATXN2Q99700 1313 aaKnown RBP26.45■■□□□ 1.83
PPP4R4-202ENST00000328839 NEDD8-MDP1E9PL57 170 aa26.45■■□□□ 1.82
PPP4R4-202ENST00000328839 TRIM24O15164 1050 aa26.45■■□□□ 1.82
PPP4R4-202ENST00000328839 WASP42768 502 aa26.45■■□□□ 1.82
PPP4R4-202ENST00000328839 PTGER3P43115 390 aa26.45■■□□□ 1.82
PPP4R4-202ENST00000328839 GOLGA8FQ08AF8 430 aa26.45■■□□□ 1.82
PPP4R4-202ENST00000328839 GOLGA8DPQ0D2H9 430 aa26.45■■□□□ 1.82
PPP4R4-202ENST00000328839 GRAMD4Q6IC98 578 aa26.45■■□□□ 1.82
PPP4R4-202ENST00000328839 GPRIN1Q7Z2K8 1008 aa26.45■■□□□ 1.82
PPP4R4-202ENST00000328839 TMEM174Q8WUU8 243 aa26.45■■□□□ 1.82
PPP4R4-202ENST00000328839 LSM7Q9UK45 103 aaKnown RBP26.45■■□□□ 1.82
PPP4R4-202ENST00000328839 ADAMTS9Q9P2N4 1935 aa26.44■■□□□ 1.82
PPP4R4-202ENST00000328839 IKBKBO14920 756 aa26.44■■□□□ 1.82
PPP4R4-202ENST00000328839 CYP26A1O43174 497 aa26.44■■□□□ 1.82
PPP4R4-202ENST00000328839 HOXB2P14652 356 aa26.44■■□□□ 1.82
PPP4R4-202ENST00000328839 ATP5C1P36542 298 aaKnown RBP26.44■■□□□ 1.82
PPP4R4-202ENST00000328839 VAMP7P51809 220 aa26.44■■□□□ 1.82
PPP4R4-202ENST00000328839 ZNF252P-AS1Q0IIN9 211 aa26.44■■□□□ 1.82
PPP4R4-202ENST00000328839 MAP7D1Q3KQU3 841 aa26.44■■□□□ 1.82
PPP4R4-202ENST00000328839 TPGS1Q6ZTW0 290 aa26.44■■□□□ 1.82
PPP4R4-202ENST00000328839 CLEC20AQ6ZU45 233 aa26.44■■□□□ 1.82
PPP4R4-202ENST00000328839 ERLEC1Q96DZ1 483 aa26.44■■□□□ 1.82
PPP4R4-202ENST00000328839 TWNKQ96RR1 684 aa26.44■■□□□ 1.82
PPP4R4-202ENST00000328839 DUSP9Q99956 384 aaKnown RBP26.44■■□□□ 1.82
PPP4R4-202ENST00000328839 BBS2Q9BXC9 721 aa26.44■■□□□ 1.82
PPP4R4-202ENST00000328839 KLF16Q9BXK1 252 aaPredicted RBP26.44■■□□□ 1.82
PPP4R4-202ENST00000328839 NUSAP1Q9BXS6 441 aaKnown RBP26.44■■□□□ 1.82
PPP4R4-202ENST00000328839 MMRN2Q9H8L6 949 aa26.44■■□□□ 1.82
PPP4R4-202ENST00000328839 USP25Q9UHP3 1055 aa26.44■■□□□ 1.82
PPP4R4-202ENST00000328839 CDX4O14627 284 aaPredicted RBP26.43■■□□□ 1.82
PPP4R4-202ENST00000328839 KIF20AO95235 890 aa26.43■■□□□ 1.82
PPP4R4-202ENST00000328839 ACO1P21399 889 aaKnown RBP26.43■■□□□ 1.82
PPP4R4-202ENST00000328839 C1orf220Q5T0J3 134 aa26.43■■□□□ 1.82
PPP4R4-202ENST00000328839 LYSMD4Q5XG99 296 aa26.43■■□□□ 1.82
PPP4R4-202ENST00000328839 HTR3DQ70Z44 454 aa26.43■■□□□ 1.82
PPP4R4-202ENST00000328839 SYT12Q8IV01 421 aa26.43■■□□□ 1.82
PPP4R4-202ENST00000328839 KCNV2Q8TDN2 545 aa26.43■■□□□ 1.82
PPP4R4-202ENST00000328839 CCDC47Q96A33 483 aaKnown RBP26.43■■□□□ 1.82
PPP4R4-202ENST00000328839 CYFIP2Q96F07 1278 aa26.43■■□□□ 1.82
PPP4R4-202ENST00000328839 XPO6Q96QU8 1125 aaKnown RBP26.43■■□□□ 1.82
PPP4R4-202ENST00000328839 EVLQ9UI08 416 aaPredicted RBP26.43■■□□□ 1.82
PPP4R4-202ENST00000328839 SCML2Q9UQR0 700 aa26.43■■□□□ 1.82
PPP4R4-202ENST00000328839 GON4LQ3T8J9 2241 aa26.42■■□□□ 1.82
PPP4R4-202ENST00000328839 MYL1P05976 194 aa26.42■■□□□ 1.82
PPP4R4-202ENST00000328839 TRIM49P0CI25 452 aa26.42■■□□□ 1.82
PPP4R4-202ENST00000328839 TRIM49CP0CI26 452 aa26.42■■□□□ 1.82
PPP4R4-202ENST00000328839 TYRP14679 529 aa26.42■■□□□ 1.82
PPP4R4-202ENST00000328839 CD58P19256 250 aa26.42■■□□□ 1.82
PPP4R4-202ENST00000328839 CMA1P23946 247 aa26.42■■□□□ 1.82
PPP4R4-202ENST00000328839 NR2F2P24468 414 aa26.42■■□□□ 1.82
PPP4R4-202ENST00000328839 NTSR1P30989 418 aa26.42■■□□□ 1.82
PPP4R4-202ENST00000328839 MAPK8P45983 427 aa26.42■■□□□ 1.82
PPP4R4-202ENST00000328839 GCLMP48507 274 aa26.42■■□□□ 1.82
PPP4R4-202ENST00000328839 LMAN2Q12907 356 aa26.42■■□□□ 1.82
PPP4R4-202ENST00000328839 FOXC1Q12948 553 aa26.42■■□□□ 1.82
PPP4R4-202ENST00000328839 DEFB119Q8N690 84 aa26.42■■□□□ 1.82
PPP4R4-202ENST00000328839 HNRNPABQ99729 332 aaKnown RBP26.42■■□□□ 1.82
PPP4R4-202ENST00000328839 NT5C1AQ9BXI3 368 aa26.42■■□□□ 1.82
PPP4R4-202ENST00000328839 CYLDQ9NQC7 956 aa26.42■■□□□ 1.82
PPP4R4-202ENST00000328839 TMEM74BQ9NUR3 256 aa26.42■■□□□ 1.82
PPP4R4-202ENST00000328839 OSER1Q9NX31 292 aa26.42■■□□□ 1.82
PPP4R4-202ENST00000328839 NUDT5Q9UKK9 219 aa26.42■■□□□ 1.82
PPP4R4-202ENST00000328839 MDM4O15151 490 aa26.41■■□□□ 1.82
PPP4R4-202ENST00000328839 ZBTB24O43167 697 aaPredicted RBP26.41■■□□□ 1.82
PPP4R4-202ENST00000328839 KRT13P13646 458 aa26.41■■□□□ 1.82
PPP4R4-202ENST00000328839 GABRG2P18507 467 aa26.41■■□□□ 1.82
PPP4R4-202ENST00000328839 RPL6Q02878 288 aaKnown RBP26.41■■□□□ 1.82
PPP4R4-202ENST00000328839 INCA1Q0VD86 236 aa26.41■■□□□ 1.82
PPP4R4-202ENST00000328839 EGFLAMQ63HQ2 1017 aa26.41■■□□□ 1.82
PPP4R4-202ENST00000328839 SDE2Q6IQ49 451 aa26.41■■□□□ 1.82
PPP4R4-202ENST00000328839 MIB1Q86YT6 1006 aa26.41■■□□□ 1.82
PPP4R4-202ENST00000328839 CHPFQ8IZ52 775 aa26.41■■□□□ 1.82
PPP4R4-202ENST00000328839 BHMTQ93088 406 aa26.41■■□□□ 1.82
PPP4R4-202ENST00000328839 SPATA32Q96LK8 384 aa26.41■■□□□ 1.82
PPP4R4-202ENST00000328839 CALCOCO1Q9P1Z2 691 aa26.41■■□□□ 1.82
PPP4R4-202ENST00000328839 WDR35Q9P2L0 1181 aa26.41■■□□□ 1.82
PPP4R4-202ENST00000328839 MAPK8IP1Q9UQF2 711 aa26.41■■□□□ 1.82
PPP4R4-202ENST00000328839 TRAF3IP3Q9Y228 551 aa26.41■■□□□ 1.82
PPP4R4-202ENST00000328839 A0A1W2PQH9 124 aa26.4■■□□□ 1.82
PPP4R4-202ENST00000328839 AP5Z1O43299 807 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms