RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 RABGGTBP53611 331 aa9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 LILRA4P59901 499 aa9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 TMPRSS15P98073 1019 aa9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 BTG3Q14201 252 aaPredicted RBP9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 FAM133BQ5BKY9 247 aaKnown RBP9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 PLEKHA7Q6IQ23 1121 aa9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 GDF6Q6KF10 455 aaPredicted RBP9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 PMF1Q6P1K2 205 aa9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 LMO3Q8TAP4 145 aa9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 GIPC2Q8TF65 315 aa9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 EXT2Q93063 718 aa9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 MCUR1Q96AQ8 359 aa9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 RMDN1Q96DB5 314 aa9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 SNRNP25Q9BV90 132 aaKnown RBP9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 CATSPERBQ9H7T0 1116 aa9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 CYP4F11Q9HBI6 524 aa9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 GDF3Q9NR23 364 aa9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 PCDHB5Q9Y5E4 795 aa9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 CAND2O75155 1236 aa9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 AGTP01019 485 aa9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 GSTA1P08263 222 aa9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 GSTA2P09210 222 aa9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 OR4Q2P0C623 313 aa9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 ASPAP45381 313 aa9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 WNT7BP56706 349 aa9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 PURAQ00577 322 aaKnown RBP9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 TSTA3Q13630 321 aaPredicted RBP9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 TAF5Q15542 800 aa9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 ACCSLQ4AC99 568 aa9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 ZDHHC17Q8IUH5 632 aa9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 SLC25A41Q8N5S1 370 aa9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 FBXO36Q8NEA4 188 aa9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 MYLPFQ96A32 169 aa9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 NUDCD1Q96RS6 583 aa9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 TBCBQ99426 244 aa9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 DDX23Q9BUQ8 820 aaKnown RBP9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 MYH11P35749 1972 aa9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 TUBGCP6Q96RT7 1819 aa9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 IGKV6D-21A0A0A0MT36 114 aa9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 TOMM70O94826 608 aa9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 PECAM1P16284 738 aaPredicted RBP9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 TYK2P29597 1187 aa9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 MDH1P40925 334 aaKnown RBP9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 ACLYP53396 1101 aa9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 DMTNQ08495 405 aa9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 NR1H3Q13133 447 aa9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 LCLAT1Q6UWP7 414 aa9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 TMC3Q7Z5M5 1100 aa9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 TFAP2DQ7Z6R9 452 aa9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 HSFY1Q96LI6 401 aa9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 PWWP2AQ96N64 755 aa9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 POPDC2Q9HBU9 364 aa9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 G3BP2Q9UN86 482 aaKnown RBP9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 R3HDM2Q9Y2K5 976 aaKnown RBP9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 TAF1LQ8IZX4 1826 aa9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 GOLGA8CPA6NN73 597 aa9.63□□□□□ -0.87
TMEM39A-201ENST00000319172 PRAMEP78395 509 aa9.63□□□□□ -0.87
TMEM39A-201ENST00000319172 POU5F1BQ06416 359 aa9.63□□□□□ -0.87
TMEM39A-201ENST00000319172 TRIM32Q13049 653 aa9.63□□□□□ -0.87
TMEM39A-201ENST00000319172 TUSC3Q13454 348 aa9.63□□□□□ -0.87
TMEM39A-201ENST00000319172 CST9Q5W186 159 aa9.63□□□□□ -0.87
TMEM39A-201ENST00000319172 FAM228AQ86W67 206 aa9.63□□□□□ -0.87
TMEM39A-201ENST00000319172 RASSF3Q86WH2 238 aa9.63□□□□□ -0.87
TMEM39A-201ENST00000319172 TMEM130Q8N3G9 435 aa9.63□□□□□ -0.87
TMEM39A-201ENST00000319172 GPR152Q8TDT2 470 aa9.63□□□□□ -0.87
TMEM39A-201ENST00000319172 GANCQ8TET4 914 aa9.63□□□□□ -0.87
TMEM39A-201ENST00000319172 TRIB2Q92519 343 aa9.63□□□□□ -0.87
TMEM39A-201ENST00000319172 CAVIN3Q969G5 261 aa9.63□□□□□ -0.87
TMEM39A-201ENST00000319172 PFDN4Q9NQP4 134 aa9.63□□□□□ -0.87
TMEM39A-201ENST00000319172 SMPD4Q9NXE4 827 aa9.63□□□□□ -0.87
TMEM39A-201ENST00000319172 SRRDQ9UH36 339 aa9.63□□□□□ -0.87
TMEM39A-201ENST00000319172 DPYSL4O14531 572 aa9.63□□□□□ -0.87
TMEM39A-201ENST00000319172 SCAMP3O14828 347 aaKnown RBP9.63□□□□□ -0.87
TMEM39A-201ENST00000319172 PMM2O15305 246 aa9.63□□□□□ -0.87
TMEM39A-201ENST00000319172 CYP1A1P04798 512 aaPredicted RBP9.63□□□□□ -0.87
TMEM39A-201ENST00000319172 SLC10A3P09131 477 aa9.63□□□□□ -0.87
TMEM39A-201ENST00000319172 UNGP13051 313 aaPredicted RBP9.63□□□□□ -0.87
TMEM39A-201ENST00000319172 RBL1P28749 1068 aa9.63□□□□□ -0.87
TMEM39A-201ENST00000319172 HARS2P49590 506 aaKnown RBP9.63□□□□□ -0.87
TMEM39A-201ENST00000319172 KCNT2Q6UVM3 1135 aa9.63□□□□□ -0.87
TMEM39A-201ENST00000319172 TMC7Q7Z402 723 aa9.63□□□□□ -0.87
TMEM39A-201ENST00000319172 MAML1Q92585 1016 aa9.63□□□□□ -0.87
TMEM39A-201ENST00000319172 PRMT1Q99873 361 aaKnown RBP9.63□□□□□ -0.87
TMEM39A-201ENST00000319172 FOXP3Q9BZS1 431 aa9.63□□□□□ -0.87
TMEM39A-201ENST00000319172 PCDH9Q9HC56 1237 aa9.63□□□□□ -0.87
TMEM39A-201ENST00000319172 CHST12Q9NRB3 414 aa9.63□□□□□ -0.87
TMEM39A-201ENST00000319172 GTF2IRD1Q9UHL9 959 aa9.63□□□□□ -0.87
TMEM39A-201ENST00000319172 DCTN4Q9UJW0 460 aa9.63□□□□□ -0.87
TMEM39A-201ENST00000319172 DERAQ9Y315 318 aa9.63□□□□□ -0.87
TMEM39A-201ENST00000319172 A0A0G2JND7 137 aa9.63□□□□□ -0.87
TMEM39A-201ENST00000319172 TMEM120BA0PK00 339 aa9.63□□□□□ -0.87
TMEM39A-201ENST00000319172 H7C4K7 107 aa9.63□□□□□ -0.87
TMEM39A-201ENST00000319172 PFDN6O15212 129 aa9.63□□□□□ -0.87
TMEM39A-201ENST00000319172 FANCGO15287 622 aa9.63□□□□□ -0.87
TMEM39A-201ENST00000319172 URODP06132 367 aa9.63□□□□□ -0.87
TMEM39A-201ENST00000319172 RCN2Q14257 317 aa9.63□□□□□ -0.87
TMEM39A-201ENST00000319172 MAP7D1Q3KQU3 841 aa9.63□□□□□ -0.87
TMEM39A-201ENST00000319172 FAM35AQ86V20 835 aa9.63□□□□□ -0.87
TMEM39A-201ENST00000319172 NLRP14Q86W24 1093 aa9.63□□□□□ -0.87
TMEM39A-201ENST00000319172 XYLT1Q86Y38 959 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms