RNA–Protein interactions for RNA: ENST00000318130.12

EDEM3-201, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EDEM3, Length 6,898 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-201ENST00000318130 PACSIN1Q9BY11 444 aa14.32□□□□□ -0.12
EDEM3-201ENST00000318130 DDIT4Q9NX09 232 aa14.32□□□□□ -0.12
EDEM3-201ENST00000318130 COL5A2P05997 1499 aaPredicted RBP14.32□□□□□ -0.12
EDEM3-201ENST00000318130 CAPZA2P47755 286 aa14.32□□□□□ -0.12
EDEM3-201ENST00000318130 NUP107P57740 925 aa14.32□□□□□ -0.12
EDEM3-201ENST00000318130 SGSM1Q2NKQ1 1148 aa14.32□□□□□ -0.12
EDEM3-201ENST00000318130 ADGRA1Q86SQ6 560 aa14.32□□□□□ -0.12
EDEM3-201ENST00000318130 ILDR1Q86SU0 546 aaPredicted RBP14.32□□□□□ -0.12
EDEM3-201ENST00000318130 SYTL2Q9HCH5 934 aa14.32□□□□□ -0.12
EDEM3-201ENST00000318130 TFE3P19532 575 aaPredicted RBP14.32□□□□□ -0.12
EDEM3-201ENST00000318130 SLC39A12Q504Y0 691 aa14.32□□□□□ -0.12
EDEM3-201ENST00000318130 NT5DC3Q86UY8 548 aa14.32□□□□□ -0.12
EDEM3-201ENST00000318130 TMEM199Q8N511 208 aa14.32□□□□□ -0.12
EDEM3-201ENST00000318130 KLHL4Q9C0H6 718 aa14.32□□□□□ -0.12
EDEM3-201ENST00000318130 IL1R1P14778 569 aa14.32□□□□□ -0.12
EDEM3-201ENST00000318130 FGFR2P21802 821 aa14.32□□□□□ -0.12
EDEM3-201ENST00000318130 RFC5P40937 340 aa14.32□□□□□ -0.12
EDEM3-201ENST00000318130 SLC11A2P49281 568 aa14.32□□□□□ -0.12
EDEM3-201ENST00000318130 OTUD4Q01804 1114 aaKnown RBP14.32□□□□□ -0.12
EDEM3-201ENST00000318130 POLD3Q15054 466 aaPredicted RBP14.32□□□□□ -0.12
EDEM3-201ENST00000318130 ADRM1Q16186 407 aa14.32□□□□□ -0.12
EDEM3-201ENST00000318130 USP50Q70EL3 339 aaPredicted RBP14.32□□□□□ -0.12
EDEM3-201ENST00000318130 NAT16Q8N8M0 369 aa14.32□□□□□ -0.12
EDEM3-201ENST00000318130 RSAD1Q9HA92 442 aa14.32□□□□□ -0.12
EDEM3-201ENST00000318130 UBP1Q9NZI7 540 aa14.32□□□□□ -0.12
EDEM3-201ENST00000318130 PSMA4P25789 261 aaKnown RBP14.31□□□□□ -0.12
EDEM3-201ENST00000318130 RIN3Q8TB24 985 aa14.31□□□□□ -0.12
EDEM3-201ENST00000318130 MED8Q96G25 268 aa14.31□□□□□ -0.12
EDEM3-201ENST00000318130 STMN3Q9NZ72 180 aa14.31□□□□□ -0.12
EDEM3-201ENST00000318130 PCDHB2Q9Y5E7 798 aa14.31□□□□□ -0.12
EDEM3-201ENST00000318130 SMNDC1O75940 238 aaKnown RBP eCLIP14.31□□□□□ -0.12
EDEM3-201ENST00000318130 CALB2P22676 271 aa14.31□□□□□ -0.12
EDEM3-201ENST00000318130 PCSK1P29120 753 aa14.31□□□□□ -0.12
EDEM3-201ENST00000318130 ELOA2Q8IYF1 753 aaPredicted RBP14.31□□□□□ -0.12
EDEM3-201ENST00000318130 TMEM120AQ9BXJ8 343 aa14.31□□□□□ -0.12
EDEM3-201ENST00000318130 CEP41Q9BYV8 373 aa14.31□□□□□ -0.12
EDEM3-201ENST00000318130 LACRTQ9GZZ8 138 aa14.31□□□□□ -0.12
EDEM3-201ENST00000318130 LINC00854A0A1B0GVQ3 168 aa14.31□□□□□ -0.12
EDEM3-201ENST00000318130 ZNF189O75820 626 aaPredicted RBP14.31□□□□□ -0.12
EDEM3-201ENST00000318130 SUPT20HL2P0C7V6 817 aa14.31□□□□□ -0.12
EDEM3-201ENST00000318130 PLEKHA7Q6IQ23 1121 aa14.31□□□□□ -0.12
EDEM3-201ENST00000318130 CHADLQ6NUI6 762 aa14.31□□□□□ -0.12
EDEM3-201ENST00000318130 DENND5BQ6ZUT9 1274 aa14.31□□□□□ -0.12
EDEM3-201ENST00000318130 TBC1D19Q8N5T2 526 aa14.31□□□□□ -0.12
EDEM3-201ENST00000318130 ZNF669Q96BR6 464 aaPredicted RBP14.31□□□□□ -0.12
EDEM3-201ENST00000318130 SH3GL1Q99961 368 aa14.31□□□□□ -0.12
EDEM3-201ENST00000318130 MROH8Q9H579 483 aa14.31□□□□□ -0.12
EDEM3-201ENST00000318130 MRGBPQ9NV56 204 aa14.31□□□□□ -0.12
EDEM3-201ENST00000318130 MSH4O15457 936 aa14.31□□□□□ -0.12
EDEM3-201ENST00000318130 SH3BGRLO75368 114 aa14.31□□□□□ -0.12
EDEM3-201ENST00000318130 IKBKEQ14164 716 aa14.31□□□□□ -0.12
EDEM3-201ENST00000318130 PHF21AQ96BD5 680 aa14.31□□□□□ -0.12
EDEM3-201ENST00000318130 STN1Q9H668 368 aaKnown RBP14.31□□□□□ -0.12
EDEM3-201ENST00000318130 NSMCE4AQ9NXX6 385 aa14.31□□□□□ -0.12
EDEM3-201ENST00000318130 PNPLA6Q8IY17 1366 aa14.31□□□□□ -0.12
EDEM3-201ENST00000318130 A0A1B0GW55 424 aa14.31□□□□□ -0.12
EDEM3-201ENST00000318130 AOC2O75106 756 aa14.31□□□□□ -0.12
EDEM3-201ENST00000318130 GLI1P08151 1106 aa14.31□□□□□ -0.12
EDEM3-201ENST00000318130 DUX4L2P0CJ85 424 aa14.31□□□□□ -0.12
EDEM3-201ENST00000318130 DUX4L3P0CJ86 424 aa14.31□□□□□ -0.12
EDEM3-201ENST00000318130 DUX4L4P0CJ87 422 aa14.31□□□□□ -0.12
EDEM3-201ENST00000318130 DUX4L5P0CJ88 424 aa14.31□□□□□ -0.12
EDEM3-201ENST00000318130 DUX4L6P0CJ89 424 aa14.31□□□□□ -0.12
EDEM3-201ENST00000318130 DUX4L7P0CJ90 424 aa14.31□□□□□ -0.12
EDEM3-201ENST00000318130 CXCL8P10145 99 aa14.31□□□□□ -0.12
EDEM3-201ENST00000318130 PTPN4P29074 926 aa14.31□□□□□ -0.12
EDEM3-201ENST00000318130 FUT11Q495W5 492 aa14.31□□□□□ -0.12
EDEM3-201ENST00000318130 CDC42EP4Q9H3Q1 356 aaKnown RBP14.31□□□□□ -0.12
EDEM3-201ENST00000318130 THG1LQ9NWX6 298 aaKnown RBP14.31□□□□□ -0.12
EDEM3-201ENST00000318130 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.31□□□□□ -0.12
EDEM3-201ENST00000318130 DUX4Q9UBX2 424 aa14.31□□□□□ -0.12
EDEM3-201ENST00000318130 MKL2Q9ULH7 1088 aa14.31□□□□□ -0.12
EDEM3-201ENST00000318130 RARGP13631 454 aa14.3□□□□□ -0.12
EDEM3-201ENST00000318130 PRLRP16471 622 aa14.3□□□□□ -0.12
EDEM3-201ENST00000318130 ZNF23P17027 643 aa14.3□□□□□ -0.12
EDEM3-201ENST00000318130 ACOX1Q15067 660 aa14.3□□□□□ -0.12
EDEM3-201ENST00000318130 DET1Q7L5Y6 550 aa14.3□□□□□ -0.12
EDEM3-201ENST00000318130 LENG1Q96BZ8 264 aaPredicted RBP14.3□□□□□ -0.12
EDEM3-201ENST00000318130 TUBGCP3Q96CW5 907 aa14.3□□□□□ -0.12
EDEM3-201ENST00000318130 DDX43Q9NXZ2 648 aaKnown RBP14.3□□□□□ -0.12
EDEM3-201ENST00000318130 AQP5P55064 265 aa14.3□□□□□ -0.12
EDEM3-201ENST00000318130 SEC13P55735 322 aa14.3□□□□□ -0.12
EDEM3-201ENST00000318130 FBXO36Q8NEA4 188 aa14.3□□□□□ -0.12
EDEM3-201ENST00000318130 FEZF2Q8TBJ5 459 aa14.3□□□□□ -0.12
EDEM3-201ENST00000318130 KRT35Q92764 455 aa14.3□□□□□ -0.12
EDEM3-201ENST00000318130 GLMNQ92990 594 aa14.3□□□□□ -0.12
EDEM3-201ENST00000318130 TRIM62Q9BVG3 475 aa14.3□□□□□ -0.12
EDEM3-201ENST00000318130 VPS33BQ9H267 617 aa14.3□□□□□ -0.12
EDEM3-201ENST00000318130 PSMD3O43242 534 aa14.3□□□□□ -0.12
EDEM3-201ENST00000318130 EXTL3O43909 919 aa14.3□□□□□ -0.12
EDEM3-201ENST00000318130 IL18RAPO95256 599 aa14.3□□□□□ -0.12
EDEM3-201ENST00000318130 MARK2Q7KZI7 788 aaKnown RBP14.3□□□□□ -0.12
EDEM3-201ENST00000318130 FBXO25Q8TCJ0 367 aa14.3□□□□□ -0.12
EDEM3-201ENST00000318130 RXFP1Q9HBX9 757 aa14.3□□□□□ -0.12
EDEM3-201ENST00000318130 TRPC5OSA6NMA1 111 aa14.3□□□□□ -0.12
EDEM3-201ENST00000318130 INSRRP14616 1297 aa14.3□□□□□ -0.12
EDEM3-201ENST00000318130 STX5Q13190 355 aa14.3□□□□□ -0.12
EDEM3-201ENST00000318130 PHKG1Q16816 387 aa14.3□□□□□ -0.12
EDEM3-201ENST00000318130 CASP10Q92851 521 aa14.3□□□□□ -0.12
EDEM3-201ENST00000318130 RNPEPQ9H4A4 650 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms