RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 ALDH1A2O94788 518 aa18.7■□□□□ 0.58
TPM1-203ENST00000317516 RARGP13631 454 aa18.7■□□□□ 0.58
TPM1-203ENST00000317516 PGFP49763 221 aa18.7■□□□□ 0.58
TPM1-203ENST00000317516 DGKEP52429 567 aa18.7■□□□□ 0.58
TPM1-203ENST00000317516 RAD23BP54727 409 aa18.7■□□□□ 0.58
TPM1-203ENST00000317516 CETN1Q12798 172 aa18.7■□□□□ 0.58
TPM1-203ENST00000317516 ANO4Q32M45 955 aa18.7■□□□□ 0.58
TPM1-203ENST00000317516 USP39Q53GS9 565 aaKnown RBP18.7■□□□□ 0.58
TPM1-203ENST00000317516 C10orf120Q5SQS8 335 aa18.7■□□□□ 0.58
TPM1-203ENST00000317516 ARHGAP17Q68EM7 881 aa18.7■□□□□ 0.58
TPM1-203ENST00000317516 ISM2Q6H9L7 571 aa18.7■□□□□ 0.58
TPM1-203ENST00000317516 CCDC186Q7Z3E2 898 aa18.7■□□□□ 0.58
TPM1-203ENST00000317516 ARHGAP18Q8N392 663 aa18.7■□□□□ 0.58
TPM1-203ENST00000317516 ZNF276Q8N554 614 aa18.7■□□□□ 0.58
TPM1-203ENST00000317516 SLC4A11Q8NBS3 891 aa18.7■□□□□ 0.58
TPM1-203ENST00000317516 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.7■□□□□ 0.583e-7■■■□□ 15.3
TPM1-203ENST00000317516 CLIC5Q9NZA1 410 aa18.7■□□□□ 0.58
TPM1-203ENST00000317516 USP3Q9Y6I4 520 aa18.7■□□□□ 0.58
TPM1-203ENST00000317516 ANAPC1Q9H1A4 1944 aa18.7■□□□□ 0.58
TPM1-203ENST00000317516 A0A1W2PQH9 124 aa18.69■□□□□ 0.58
TPM1-203ENST00000317516 TRIM49BA6NDI0 452 aa18.69■□□□□ 0.58
TPM1-203ENST00000317516 RHOBTB1O94844 696 aa18.69■□□□□ 0.58
TPM1-203ENST00000317516 TBXAS1P24557 533 aaPredicted RBP18.69■□□□□ 0.58
TPM1-203ENST00000317516 CUL2Q13617 745 aa18.69■□□□□ 0.58
TPM1-203ENST00000317516 ELF2Q15723 593 aa18.69■□□□□ 0.58
TPM1-203ENST00000317516 CRY1Q16526 586 aa18.69■□□□□ 0.58
TPM1-203ENST00000317516 EOGTQ5NDL2 527 aa18.69■□□□□ 0.58
TPM1-203ENST00000317516 KBTBD6Q86V97 674 aa18.69■□□□□ 0.58
TPM1-203ENST00000317516 C11orf74Q86VG3 221 aa18.69■□□□□ 0.58
TPM1-203ENST00000317516 TMEM25Q86YD3 366 aa18.69■□□□□ 0.58
TPM1-203ENST00000317516 CCDC33Q8N5R6 958 aa18.69■□□□□ 0.58
TPM1-203ENST00000317516 ANKRD52Q8NB46 1076 aa18.69■□□□□ 0.58
TPM1-203ENST00000317516 KCNV2Q8TDN2 545 aa18.69■□□□□ 0.58
TPM1-203ENST00000317516 SLC35C1Q96A29 364 aa18.69■□□□□ 0.58
TPM1-203ENST00000317516 ZC3H10Q96K80 434 aaKnown RBP18.69■□□□□ 0.58
TPM1-203ENST00000317516 XPO6Q96QU8 1125 aaKnown RBP18.69■□□□□ 0.58
TPM1-203ENST00000317516 RTKNQ9BST9 563 aa18.69■□□□□ 0.58
TPM1-203ENST00000317516 OSER1Q9NX31 292 aa18.69■□□□□ 0.58
TPM1-203ENST00000317516 WDR35Q9P2L0 1181 aa18.69■□□□□ 0.58
TPM1-203ENST00000317516 MAN1B1Q9UKM7 699 aa18.69■□□□□ 0.58
TPM1-203ENST00000317516 KIAA1257Q9ULG3 409 aa18.69■□□□□ 0.58
TPM1-203ENST00000317516 BICDL2A1A5D9 508 aa18.68■□□□□ 0.58
TPM1-203ENST00000317516 TIE1P35590 1138 aa18.68■□□□□ 0.58
TPM1-203ENST00000317516 COG7P83436 770 aa18.68■□□□□ 0.58
TPM1-203ENST00000317516 CCDC40Q4G0X9 1142 aa18.68■□□□□ 0.58
TPM1-203ENST00000317516 FOXR2Q6PJQ5 311 aa18.68■□□□□ 0.58
TPM1-203ENST00000317516 PRR23CQ6ZRP0 262 aa18.68■□□□□ 0.58
TPM1-203ENST00000317516 TRMT11Q7Z4G4 463 aaKnown RBP18.68■□□□□ 0.58
TPM1-203ENST00000317516 C12orf40Q86WS4 652 aa18.68■□□□□ 0.58
TPM1-203ENST00000317516 NAT16Q8N8M0 369 aa18.68■□□□□ 0.58
TPM1-203ENST00000317516 ARID3AQ99856 593 aa18.68■□□□□ 0.58
TPM1-203ENST00000317516 NMUR1Q9HB89 426 aa18.68■□□□□ 0.58
TPM1-203ENST00000317516 POLMQ9NP87 494 aaPredicted RBP18.68■□□□□ 0.58
TPM1-203ENST00000317516 HESX1Q9UBX0 185 aa18.68■□□□□ 0.58
TPM1-203ENST00000317516 ZNF510Q9Y2H8 683 aa18.68■□□□□ 0.58
TPM1-203ENST00000317516 PCDHGA5Q9Y5G8 931 aa18.68■□□□□ 0.58
TPM1-203ENST00000317516 PMM2O15305 246 aa18.67■□□□□ 0.58
TPM1-203ENST00000317516 TULP3O75386 442 aa18.67■□□□□ 0.58
TPM1-203ENST00000317516 KLF8O95600 359 aaPredicted RBP18.67■□□□□ 0.58
TPM1-203ENST00000317516 ATXN1P54253 815 aaKnown RBP18.67■□□□□ 0.58
TPM1-203ENST00000317516 KDSRQ06136 332 aa18.67■□□□□ 0.58
TPM1-203ENST00000317516 SGO2Q562F6 1265 aa18.67■□□□□ 0.58
TPM1-203ENST00000317516 KLHL10Q6JEL2 608 aa18.67■□□□□ 0.58
TPM1-203ENST00000317516 SCD5Q86SK9 330 aa18.67■□□□□ 0.58
TPM1-203ENST00000317516 PIGZQ86VD9 579 aa18.67■□□□□ 0.58
TPM1-203ENST00000317516 ETFBKMTQ8IXQ9 262 aa18.67■□□□□ 0.58
TPM1-203ENST00000317516 ALLCQ8N6M5 410 aa18.67■□□□□ 0.58
TPM1-203ENST00000317516 TXNDC5Q8NBS9 432 aaKnown RBP18.67■□□□□ 0.58
TPM1-203ENST00000317516 NETO1Q8TDF5 533 aa18.67■□□□□ 0.58
TPM1-203ENST00000317516 CNOT6LQ96LI5 555 aaKnown RBP18.67■□□□□ 0.58
TPM1-203ENST00000317516 ARRDC1-AS1Q9H2J1 176 aa18.67■□□□□ 0.58
TPM1-203ENST00000317516 CIZ1Q9ULV3 898 aaPredicted RBP18.67■□□□□ 0.58
TPM1-203ENST00000317516 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.67■□□□□ 0.58
TPM1-203ENST00000317516 CEP250Q9BV73 2442 aa18.66■□□□□ 0.58
TPM1-203ENST00000317516 GREM1O60565 184 aa18.66■□□□□ 0.58
TPM1-203ENST00000317516 EPN2O95208 641 aa18.66■□□□□ 0.58
TPM1-203ENST00000317516 GNA14O95837 355 aa18.66■□□□□ 0.58
TPM1-203ENST00000317516 VDRP11473 427 aa18.66■□□□□ 0.58
TPM1-203ENST00000317516 CD19P15391 556 aa18.66■□□□□ 0.58
TPM1-203ENST00000317516 KIR2DL1P43626 348 aaPredicted RBP18.66■□□□□ 0.58
TPM1-203ENST00000317516 FMO5P49326 533 aa18.66■□□□□ 0.58
TPM1-203ENST00000317516 PLK5Q496M5 336 aa18.66■□□□□ 0.58
TPM1-203ENST00000317516 ANO7Q6IWH7 933 aa18.66■□□□□ 0.58
TPM1-203ENST00000317516 RSRC2Q7L4I2 434 aaKnown RBP18.66■□□□□ 0.58
TPM1-203ENST00000317516 RASSF3Q86WH2 238 aa18.66■□□□□ 0.58
TPM1-203ENST00000317516 TTC30AQ86WT1 665 aa18.66■□□□□ 0.58
TPM1-203ENST00000317516 MIB1Q86YT6 1006 aa18.66■□□□□ 0.58
TPM1-203ENST00000317516 C12orf50Q8NA57 414 aaPredicted RBP18.66■□□□□ 0.58
TPM1-203ENST00000317516 IL17RCQ8NAC3 791 aa18.66■□□□□ 0.58
TPM1-203ENST00000317516 NELFBQ8WX92 580 aa18.66■□□□□ 0.58
TPM1-203ENST00000317516 WBP2Q969T9 261 aa18.66■□□□□ 0.58
TPM1-203ENST00000317516 NT5C1BQ96P26 610 aa18.66■□□□□ 0.58
TPM1-203ENST00000317516 BBS2Q9BXC9 721 aa18.66■□□□□ 0.58
TPM1-203ENST00000317516 DCLK3Q9C098 648 aa18.66■□□□□ 0.58
TPM1-203ENST00000317516 LRRC4Q9HBW1 653 aa18.66■□□□□ 0.58
TPM1-203ENST00000317516 NUDT5Q9UKK9 219 aa18.66■□□□□ 0.58
TPM1-203ENST00000317516 STRIP2Q9ULQ0 834 aa18.66■□□□□ 0.58
TPM1-203ENST00000317516 FRYLO94915 3013 aa18.66■□□□□ 0.58
TPM1-203ENST00000317516 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.65■□□□□ 0.58
TPM1-203ENST00000317516 NEDD8-MDP1E9PL57 170 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms