RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 PCDH18Q9HCL0 1135 aa12.94□□□□□ -0.34
RNF4-201ENST00000314289 INTS9Q9NV88 658 aaKnown RBP12.94□□□□□ -0.34
RNF4-201ENST00000314289 INPP5FQ9Y2H2 1132 aa12.94□□□□□ -0.34
RNF4-201ENST00000314289 CYBAP13498 195 aa12.94□□□□□ -0.34
RNF4-201ENST00000314289 KCNE1P15382 129 aa12.94□□□□□ -0.34
RNF4-201ENST00000314289 DRD4P21917 467 aa12.94□□□□□ -0.34
RNF4-201ENST00000314289 BCAT1P54687 386 aa12.94□□□□□ -0.34
RNF4-201ENST00000314289 CACNB2Q08289 660 aaPredicted RBP12.94□□□□□ -0.34
RNF4-201ENST00000314289 MPP2Q14168 576 aa12.94□□□□□ -0.34
RNF4-201ENST00000314289 BBS9Q3SYG4 887 aa12.94□□□□□ -0.34
RNF4-201ENST00000314289 WLSQ5T9L3 541 aa12.94□□□□□ -0.34
RNF4-201ENST00000314289 UNC93AQ86WB7 457 aa12.94□□□□□ -0.34
RNF4-201ENST00000314289 PQLC3Q8N755 202 aa12.94□□□□□ -0.34
RNF4-201ENST00000314289 CHMP6Q96FZ7 201 aa12.94□□□□□ -0.34
RNF4-201ENST00000314289 RNF157Q96PX1 679 aa12.94□□□□□ -0.34
RNF4-201ENST00000314289 XPO6Q96QU8 1125 aaKnown RBP12.94□□□□□ -0.34
RNF4-201ENST00000314289 TBCBQ99426 244 aa12.94□□□□□ -0.34
RNF4-201ENST00000314289 MTG1Q9BT17 334 aaPredicted RBP12.94□□□□□ -0.34
RNF4-201ENST00000314289 EXOC1LA0A1B0GW35 172 aa12.93□□□□□ -0.34
RNF4-201ENST00000314289 TMEM120BA0PK00 339 aa12.93□□□□□ -0.34
RNF4-201ENST00000314289 F8W810 466 aa12.93□□□□□ -0.34
RNF4-201ENST00000314289 KCNN4O15554 427 aa12.93□□□□□ -0.34
RNF4-201ENST00000314289 STILQ15468 1287 aa12.93□□□□□ -0.34
RNF4-201ENST00000314289 SV2CQ496J9 727 aa12.93□□□□□ -0.34
RNF4-201ENST00000314289 DCAF6Q58WW2 860 aa12.93□□□□□ -0.34
RNF4-201ENST00000314289 HFE2Q6ZVN8 426 aa12.93□□□□□ -0.34
RNF4-201ENST00000314289 TTC39CQ8N584 583 aa12.93□□□□□ -0.34
RNF4-201ENST00000314289 PLD5Q8N7P1 536 aa12.93□□□□□ -0.34
RNF4-201ENST00000314289 TRMT13Q9NUP7 481 aaKnown RBP12.93□□□□□ -0.34
RNF4-201ENST00000314289 DDX43Q9NXZ2 648 aaKnown RBP12.93□□□□□ -0.34
RNF4-201ENST00000314289 XPO7Q9UIA9 1087 aaKnown RBP12.93□□□□□ -0.34
RNF4-201ENST00000314289 SPAG7O75391 227 aa12.93□□□□□ -0.34
RNF4-201ENST00000314289 RBL1P28749 1068 aa12.93□□□□□ -0.34
RNF4-201ENST00000314289 GBP2P32456 591 aaPredicted RBP12.93□□□□□ -0.34
RNF4-201ENST00000314289 BCAR1P56945 870 aa12.93□□□□□ -0.34
RNF4-201ENST00000314289 ROR1Q01973 937 aa12.93□□□□□ -0.34
RNF4-201ENST00000314289 GBE1Q04446 702 aa12.93□□□□□ -0.34
RNF4-201ENST00000314289 NME3Q13232 169 aa12.93□□□□□ -0.34
RNF4-201ENST00000314289 KCNA10Q16322 511 aa12.93□□□□□ -0.34
RNF4-201ENST00000314289 TAZQ16635 292 aa12.93□□□□□ -0.34
RNF4-201ENST00000314289 HIF1AQ16665 826 aa12.93□□□□□ -0.34
RNF4-201ENST00000314289 TAF2Q6P1X5 1199 aa12.93□□□□□ -0.34
RNF4-201ENST00000314289 DEFB106AQ8N104 65 aa12.93□□□□□ -0.34
RNF4-201ENST00000314289 CRYBG2Q8N1P7 616 aa12.93□□□□□ -0.34
RNF4-201ENST00000314289 CCDC197Q8NCU1 140 aa12.93□□□□□ -0.34
RNF4-201ENST00000314289 CCT6BQ92526 530 aa12.93□□□□□ -0.34
RNF4-201ENST00000314289 SENP8Q96LD8 212 aa12.93□□□□□ -0.34
RNF4-201ENST00000314289 XPNPEP3Q9NQH7 507 aa12.93□□□□□ -0.34
RNF4-201ENST00000314289 TMEM30AQ9NV96 361 aa12.93□□□□□ -0.34
RNF4-201ENST00000314289 MRPL42Q9Y6G3 142 aaKnown RBP12.93□□□□□ -0.34
RNF4-201ENST00000314289 TRPM7Q96QT4 1865 aa12.92□□□□□ -0.34
RNF4-201ENST00000314289 C5orf60A6NFR6 353 aa12.92□□□□□ -0.34
RNF4-201ENST00000314289 ARL5CA6NH57 179 aa12.92□□□□□ -0.34
RNF4-201ENST00000314289 MGEA5O60502 916 aa12.92□□□□□ -0.34
RNF4-201ENST00000314289 AOC2O75106 756 aa12.92□□□□□ -0.34
RNF4-201ENST00000314289 CACNA2D1P54289 1103 aa12.92□□□□□ -0.34
RNF4-201ENST00000314289 MORF4L2Q15014 288 aa12.92□□□□□ -0.34
RNF4-201ENST00000314289 FAM133BQ5BKY9 247 aaKnown RBP12.92□□□□□ -0.34
RNF4-201ENST00000314289 ARHGAP17Q68EM7 881 aa12.92□□□□□ -0.34
RNF4-201ENST00000314289 PAQR9Q6ZVX9 377 aa12.92□□□□□ -0.34
RNF4-201ENST00000314289 TTC13Q8NBP0 860 aa12.92□□□□□ -0.34
RNF4-201ENST00000314289 PPP1R10Q96QC0 940 aaKnown RBP12.92□□□□□ -0.34
RNF4-201ENST00000314289 WDR83Q9BRX9 315 aaKnown RBP12.92□□□□□ -0.34
RNF4-201ENST00000314289 FAM129AQ9BZQ8 928 aa12.92□□□□□ -0.34
RNF4-201ENST00000314289 ETNK2Q9NVF9 386 aa12.92□□□□□ -0.34
RNF4-201ENST00000314289 GDAP2Q9NXN4 497 aa12.92□□□□□ -0.34
RNF4-201ENST00000314289 ZNF236Q9UL36 1845 aa12.92□□□□□ -0.34
RNF4-201ENST00000314289 MYBPHLA2RUH7 354 aa12.92□□□□□ -0.34
RNF4-201ENST00000314289 XPOTO43592 962 aaKnown RBP12.92□□□□□ -0.34
RNF4-201ENST00000314289 BRAFP15056 766 aa12.92□□□□□ -0.34
RNF4-201ENST00000314289 PTPN1P18031 435 aaKnown RBP12.92□□□□□ -0.34
RNF4-201ENST00000314289 NAA25Q14CX7 972 aa12.92□□□□□ -0.34
RNF4-201ENST00000314289 ACAP1Q15027 740 aa12.92□□□□□ -0.34
RNF4-201ENST00000314289 XKR4Q5GH76 650 aa12.92□□□□□ -0.34
RNF4-201ENST00000314289 ERMARDQ5T6L9 678 aa12.92□□□□□ -0.34
RNF4-201ENST00000314289 SYPL2Q5VXT5 272 aa12.92□□□□□ -0.34
RNF4-201ENST00000314289 MFSD14CQ5VZR4 134 aa12.92□□□□□ -0.34
RNF4-201ENST00000314289 RPAINQ86UA6 219 aa12.92□□□□□ -0.34
RNF4-201ENST00000314289 NME8Q8N427 588 aa12.92□□□□□ -0.34
RNF4-201ENST00000314289 CCDC110Q8TBZ0 833 aa12.92□□□□□ -0.34
RNF4-201ENST00000314289 CCHCR1Q8TD31 782 aa12.92□□□□□ -0.34
RNF4-201ENST00000314289 DYDC1Q8WWB3 177 aa12.92□□□□□ -0.34
RNF4-201ENST00000314289 ATXN2LQ8WWM7 1075 aaKnown RBP12.92□□□□□ -0.34
RNF4-201ENST00000314289 MIEF2Q96C03 454 aa12.92□□□□□ -0.34
RNF4-201ENST00000314289 GGT7Q9UJ14 662 aa12.92□□□□□ -0.34
RNF4-201ENST00000314289 FARP1Q9Y4F1 1045 aaPredicted RBP12.92□□□□□ -0.34
RNF4-201ENST00000314289 TRPV2Q9Y5S1 764 aa12.92□□□□□ -0.34
RNF4-201ENST00000314289 RALGAPA2Q2PPJ7 1873 aa12.92□□□□□ -0.34
RNF4-201ENST00000314289 KIF1CO43896 1103 aaKnown RBP12.92□□□□□ -0.34
RNF4-201ENST00000314289 HOXC8P31273 242 aa12.92□□□□□ -0.34
RNF4-201ENST00000314289 FCGRTP55899 365 aa12.92□□□□□ -0.34
RNF4-201ENST00000314289 GJA9P57773 515 aa12.92□□□□□ -0.34
RNF4-201ENST00000314289 GPX6P59796 221 aa12.92□□□□□ -0.34
RNF4-201ENST00000314289 XRCC4Q13426 336 aa12.92□□□□□ -0.34
RNF4-201ENST00000314289 NOMO1Q15155 1222 aa12.92□□□□□ -0.34
RNF4-201ENST00000314289 PCBP1Q15365 356 aaKnown RBP eCLIP12.92□□□□□ -0.34
RNF4-201ENST00000314289 ACCSLQ4AC99 568 aa12.92□□□□□ -0.34
RNF4-201ENST00000314289 VSTM1Q6UX27 236 aa12.92□□□□□ -0.34
RNF4-201ENST00000314289 AGMOQ6ZNB7 445 aa12.92□□□□□ -0.34
RNF4-201ENST00000314289 CENPUQ71F23 418 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms