RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 FTHL17Q9BXU8 183 aa22.16■■□□□ 1.14
ATG4D-201ENST00000309469 FOXP3Q9BZS1 431 aa22.16■■□□□ 1.14
ATG4D-201ENST00000309469 CDC42EP4Q9H3Q1 356 aaKnown RBP22.16■■□□□ 1.14
ATG4D-201ENST00000309469 ZNF487B1APH4 448 aa22.16■■□□□ 1.14
ATG4D-201ENST00000309469 ITGB1P05556 798 aa22.16■■□□□ 1.14
ATG4D-201ENST00000309469 RBP3P10745 1247 aa22.16■■□□□ 1.14
ATG4D-201ENST00000309469 YY1P25490 414 aa22.16■■□□□ 1.14
ATG4D-201ENST00000309469 L1CAMP32004 1257 aa22.16■■□□□ 1.14
ATG4D-201ENST00000309469 RABGGTBP53611 331 aa22.16■■□□□ 1.14
ATG4D-201ENST00000309469 DPYSL2Q16555 572 aa22.16■■□□□ 1.14
ATG4D-201ENST00000309469 INTS6LQ5JSJ4 861 aaKnown RBP22.16■■□□□ 1.14
ATG4D-201ENST00000309469 AGBL2Q5U5Z8 902 aa22.16■■□□□ 1.14
ATG4D-201ENST00000309469 PQLC3Q8N755 202 aa22.16■■□□□ 1.14
ATG4D-201ENST00000309469 PLD5Q8N7P1 536 aa22.16■■□□□ 1.14
ATG4D-201ENST00000309469 PCDH19Q8TAB3 1148 aa22.16■■□□□ 1.14
ATG4D-201ENST00000309469 FAF2Q96CS3 445 aa22.16■■□□□ 1.14
ATG4D-201ENST00000309469 PWWP2AQ96N64 755 aa22.16■■□□□ 1.14
ATG4D-201ENST00000309469 SLC2A13Q96QE2 648 aa22.16■■□□□ 1.14
ATG4D-201ENST00000309469 SEZ6LQ9BYH1 1024 aa22.16■■□□□ 1.14
ATG4D-201ENST00000309469 ULBP1Q9BZM6 244 aa22.16■■□□□ 1.14
ATG4D-201ENST00000309469 LRRC4CQ9HCJ2 640 aa22.16■■□□□ 1.14
ATG4D-201ENST00000309469 TMEM30AQ9NV96 361 aa22.16■■□□□ 1.14
ATG4D-201ENST00000309469 CALCOCO1Q9P1Z2 691 aa22.16■■□□□ 1.14
ATG4D-201ENST00000309469 ARHGEF37A1IGU5 675 aa22.15■■□□□ 1.14
ATG4D-201ENST00000309469 APOL1O14791 398 aa22.15■■□□□ 1.14
ATG4D-201ENST00000309469 DDHD2O94830 711 aa22.15■■□□□ 1.14
ATG4D-201ENST00000309469 GDF10P55107 478 aa22.15■■□□□ 1.14
ATG4D-201ENST00000309469 PPP6R3Q5H9R7 873 aaPredicted RBP22.15■■□□□ 1.14
ATG4D-201ENST00000309469 NOMO2Q5JPE7 1267 aa22.15■■□□□ 1.14
ATG4D-201ENST00000309469 RAB41Q5JT25 222 aa22.15■■□□□ 1.14
ATG4D-201ENST00000309469 ZNF280BQ86YH2 543 aa22.15■■□□□ 1.14
ATG4D-201ENST00000309469 UNC45BQ8IWX7 931 aa22.15■■□□□ 1.14
ATG4D-201ENST00000309469 THEM5Q8N1Q8 247 aa22.15■■□□□ 1.14
ATG4D-201ENST00000309469 ZCCHC9Q8N567 271 aaKnown RBP22.15■■□□□ 1.14
ATG4D-201ENST00000309469 URGCPQ8TCY9 931 aa22.15■■□□□ 1.14
ATG4D-201ENST00000309469 NT5C3BQ969T7 300 aa22.15■■□□□ 1.14
ATG4D-201ENST00000309469 DHX35Q9H5Z1 703 aaKnown RBP22.15■■□□□ 1.14
ATG4D-201ENST00000309469 CSNK1G1Q9HCP0 422 aa22.15■■□□□ 1.14
ATG4D-201ENST00000309469 BCCIPQ9P287 314 aaKnown RBP eCLIP22.15■■□□□ 1.14
ATG4D-201ENST00000309469 AP4E1Q9UPM8 1137 aa22.15■■□□□ 1.14
ATG4D-201ENST00000309469 F8W810 466 aa22.14■■□□□ 1.14
ATG4D-201ENST00000309469 NDC80O14777 642 aa22.14■■□□□ 1.14
ATG4D-201ENST00000309469 NRP1O14786 923 aa22.14■■□□□ 1.14
ATG4D-201ENST00000309469 TGM2P21980 687 aa22.14■■□□□ 1.14
ATG4D-201ENST00000309469 DAOAP59103 153 aa22.14■■□□□ 1.14
ATG4D-201ENST00000309469 SLC9A4Q6AI14 798 aa22.14■■□□□ 1.14
ATG4D-201ENST00000309469 OVOS1Q6IE37 1185 aa22.14■■□□□ 1.14
ATG4D-201ENST00000309469 C1orf228Q6PIY5 440 aa22.14■■□□□ 1.14
ATG4D-201ENST00000309469 GPRIN1Q7Z2K8 1008 aa22.14■■□□□ 1.14
ATG4D-201ENST00000309469 HOOK3Q86VS8 718 aa22.14■■□□□ 1.14
ATG4D-201ENST00000309469 CCDC185Q8N715 623 aa22.14■■□□□ 1.14
ATG4D-201ENST00000309469 NPY6RQ99463 290 aa22.14■■□□□ 1.14
ATG4D-201ENST00000309469 PKMYT1Q99640 499 aa22.14■■□□□ 1.14
ATG4D-201ENST00000309469 UNC93B1Q9H1C4 597 aa22.14■■□□□ 1.14
ATG4D-201ENST00000309469 POPDC2Q9HBU9 364 aa22.14■■□□□ 1.14
ATG4D-201ENST00000309469 CNGB3Q9NQW8 809 aa22.14■■□□□ 1.14
ATG4D-201ENST00000309469 DNAJC17Q9NVM6 304 aaKnown RBP22.14■■□□□ 1.14
ATG4D-201ENST00000309469 HHLA1C9JL84 531 aa22.14■■□□□ 1.13
ATG4D-201ENST00000309469 DNM1LO00429 736 aa22.14■■□□□ 1.13
ATG4D-201ENST00000309469 B4GALT3O60512 393 aa22.14■■□□□ 1.13
ATG4D-201ENST00000309469 TYMPP19971 482 aa22.14■■□□□ 1.13
ATG4D-201ENST00000309469 BCAR1P56945 870 aa22.14■■□□□ 1.13
ATG4D-201ENST00000309469 DSC1Q08554 894 aa22.14■■□□□ 1.13
ATG4D-201ENST00000309469 MORF4L2Q15014 288 aa22.14■■□□□ 1.13
ATG4D-201ENST00000309469 DNAJC21Q5F1R6 531 aaKnown RBP22.14■■□□□ 1.13
ATG4D-201ENST00000309469 EMC10Q5UCC4 262 aa22.14■■□□□ 1.13
ATG4D-201ENST00000309469 CEP128Q6ZU80 1094 aa22.14■■□□□ 1.13
ATG4D-201ENST00000309469 HFE2Q6ZVN8 426 aa22.14■■□□□ 1.13
ATG4D-201ENST00000309469 BNIPLQ7Z465 357 aa22.14■■□□□ 1.13
ATG4D-201ENST00000309469 RELL1Q8IUW5 271 aa22.14■■□□□ 1.13
ATG4D-201ENST00000309469 FAM126BQ8IXS8 530 aa22.14■■□□□ 1.13
ATG4D-201ENST00000309469 UHMK1Q8TAS1 419 aaKnown RBP22.14■■□□□ 1.13
ATG4D-201ENST00000309469 TMEM109Q9BVC6 243 aa22.14■■□□□ 1.13
ATG4D-201ENST00000309469 RHOBTB2Q9BYZ6 727 aa22.14■■□□□ 1.13
ATG4D-201ENST00000309469 MTMR10Q9NXD2 777 aa22.14■■□□□ 1.13
ATG4D-201ENST00000309469 STAP1Q9ULZ2 295 aa22.14■■□□□ 1.13
ATG4D-201ENST00000309469 STIP1P31948 543 aaKnown RBP22.13■■□□□ 1.13
ATG4D-201ENST00000309469 RPL22P35268 128 aaKnown RBP22.13■■□□□ 1.13
ATG4D-201ENST00000309469 SKOR1P84550 965 aa22.13■■□□□ 1.13
ATG4D-201ENST00000309469 ROR1Q01973 937 aa22.13■■□□□ 1.13
ATG4D-201ENST00000309469 BFSP2Q13515 415 aa22.13■■□□□ 1.13
ATG4D-201ENST00000309469 RNASEH2BQ5TBB1 312 aaKnown RBP22.13■■□□□ 1.13
ATG4D-201ENST00000309469 OTUD1Q5VV17 481 aaPredicted RBP22.13■■□□□ 1.13
ATG4D-201ENST00000309469 SYPL2Q5VXT5 272 aa22.13■■□□□ 1.13
ATG4D-201ENST00000309469 DARS2Q6PI48 645 aaKnown RBP22.13■■□□□ 1.13
ATG4D-201ENST00000309469 FAM71DQ8N9W8 422 aa22.13■■□□□ 1.13
ATG4D-201ENST00000309469 OR10T2Q8NGX3 314 aa22.13■■□□□ 1.13
ATG4D-201ENST00000309469 TMLHEQ9NVH6 421 aa22.13■■□□□ 1.13
ATG4D-201ENST00000309469 KANSL3Q9P2N6 904 aa22.13■■□□□ 1.13
ATG4D-201ENST00000309469 PCDHB8Q9UN66 801 aa22.13■■□□□ 1.13
ATG4D-201ENST00000309469 TTC4O95801 387 aa22.12■■□□□ 1.13
ATG4D-201ENST00000309469 NR1D1P20393 614 aa22.12■■□□□ 1.13
ATG4D-201ENST00000309469 CYP2F1P24903 491 aa22.12■■□□□ 1.13
ATG4D-201ENST00000309469 PITX1P78337 314 aaPredicted RBP22.12■■□□□ 1.13
ATG4D-201ENST00000309469 KDM7AQ6ZMT4 941 aa22.12■■□□□ 1.13
ATG4D-201ENST00000309469 PCGF5Q86SE9 256 aa22.12■■□□□ 1.13
ATG4D-201ENST00000309469 CROCCP2Q86T23 111 aa22.12■■□□□ 1.13
ATG4D-201ENST00000309469 LRRTM3Q86VH5 581 aa22.12■■□□□ 1.13
ATG4D-201ENST00000309469 ZC3H18Q86VM9 953 aaKnown RBP22.12■■□□□ 1.13
ATG4D-201ENST00000309469 FAM131BQ86XD5 332 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms