RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 HECTD3Q5T447 861 aa6.87□□□□□ -1.31
ITGB1-201ENST00000302278 POMGNT1Q8WZA1 660 aa6.87□□□□□ -1.31
ITGB1-201ENST00000302278 CALML4Q96GE6 196 aa6.87□□□□□ -1.31
ITGB1-201ENST00000302278 LRIG1Q96JA1 1093 aa6.87□□□□□ -1.31
ITGB1-201ENST00000302278 B3GNT5Q9BYG0 378 aa6.87□□□□□ -1.31
ITGB1-201ENST00000302278 CYP8B1Q9UNU6 501 aa6.87□□□□□ -1.31
ITGB1-201ENST00000302278 SNX9Q9Y5X1 595 aa6.87□□□□□ -1.31
ITGB1-201ENST00000302278 ERVH48-1M5A8F1 160 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 TBCAO75347 108 aaKnown RBP6.86□□□□□ -1.31
ITGB1-201ENST00000302278 NCAM1P13591 858 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 YWHAQP27348 245 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 ATICP31939 592 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 GRIK1P39086 918 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 ABCG1P45844 678 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 ILKQ13418 452 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 SUZ12Q15022 739 aaKnown RBP6.86□□□□□ -1.31
ITGB1-201ENST00000302278 HLA-BQ31612 363 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 BTBD8Q5XKL5 378 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 IGF2-ASQ6U949 168 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 PAQR9Q6ZVX9 377 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 TMEM25Q86YD3 366 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 SLC39A7Q92504 469 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 FAM212AQ96EL1 285 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 HPDLQ96IR7 371 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 XPO6Q96QU8 1125 aaKnown RBP6.86□□□□□ -1.31
ITGB1-201ENST00000302278 IRX2Q9BZI1 471 aaPredicted RBP6.86□□□□□ -1.31
ITGB1-201ENST00000302278 MTMR12Q9C0I1 747 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 IL21RQ9HBE5 538 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 KIAA1586Q9HCI6 787 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 ANKRD11Q6UB99 2663 aaPredicted RBP6.86□□□□□ -1.31
ITGB1-201ENST00000302278 SETXQ7Z333 2677 aaKnown RBP6.86□□□□□ -1.31
ITGB1-201ENST00000302278 TRABD2BA6NFA1 517 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 F8VP50 259 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 BCAT2O15382 392 aaPredicted RBP6.86□□□□□ -1.31
ITGB1-201ENST00000302278 NDUFS2O75306 463 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 ATXN1LP0C7T5 689 aaKnown RBP6.86□□□□□ -1.31
ITGB1-201ENST00000302278 MBL2P11226 248 aaPredicted RBP6.86□□□□□ -1.31
ITGB1-201ENST00000302278 HLA-EP13747 358 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 PTPN1P18031 435 aaKnown RBP6.86□□□□□ -1.31
ITGB1-201ENST00000302278 CTSKP43235 329 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 GRK6P43250 576 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 NEK4P51957 841 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 MCM6Q14566 821 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 EIF4HQ15056 248 aaKnown RBP6.86□□□□□ -1.31
ITGB1-201ENST00000302278 DCAF12L1Q5VU92 463 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 SDE2Q6IQ49 451 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 CCDC83Q8IWF9 413 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 SCN4BQ8IWT1 228 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 GPD1LQ8N335 351 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 ZSWIM2Q8NEG5 633 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 ENGASEQ8NFI3 743 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 WBP2Q969T9 261 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 P2RY11Q96G91 374 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 ANKRD36BP1Q96IX9 119 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 CDK5RAP3Q96JB5 506 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 FAM213AQ9BRX8 229 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 NUP58Q9BVL2 599 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 GZF1Q9H116 711 aaPredicted RBP6.86□□□□□ -1.31
ITGB1-201ENST00000302278 CD93Q9NPY3 652 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.86□□□□□ -1.315e-7■■■■■ 145.3
ITGB1-201ENST00000302278 ZNF510Q9Y2H8 683 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 ATP8B3O60423 1300 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 UBE4BO95155 1302 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 VWA3AA6NCI4 1184 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 TBC1D3BA6NDS4 549 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 YKT6O15498 198 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 TSPAN3O60637 253 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 CAMK2GQ13555 558 aaPredicted RBP6.86□□□□□ -1.31
ITGB1-201ENST00000302278 INAVAQ3KP66 663 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 FBXL19Q6PCT2 694 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 EPM2AIP1Q7L775 607 aaPredicted RBP6.86□□□□□ -1.31
ITGB1-201ENST00000302278 SFR1Q86XK3 245 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 C12orf56Q8IXR9 622 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.86□□□□□ -1.312e-8■■■□□ 14.6
ITGB1-201ENST00000302278 FAM131CQ96AQ9 280 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 ACOX2Q99424 681 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 SLC2A11Q9BYW1 496 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 XYLT2Q9H1B5 865 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 GAREM1Q9H706 876 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 PRDM16Q9HAZ2 1276 aa6.86□□□□□ -1.31
ITGB1-201ENST00000302278 TYRP14679 529 aa6.85□□□□□ -1.31
ITGB1-201ENST00000302278 TPMTP51580 245 aa6.85□□□□□ -1.31
ITGB1-201ENST00000302278 AFF3P51826 1226 aaKnown RBP6.85□□□□□ -1.31
ITGB1-201ENST00000302278 FOSBP53539 338 aa6.85□□□□□ -1.31
ITGB1-201ENST00000302278 TFAMQ00059 246 aaKnown RBP6.85□□□□□ -1.31
ITGB1-201ENST00000302278 ZBTB16Q05516 673 aa6.85□□□□□ -1.31
ITGB1-201ENST00000302278 FUT11Q495W5 492 aa6.85□□□□□ -1.31
ITGB1-201ENST00000302278 FYB2Q5VWT5 728 aa6.85□□□□□ -1.31
ITGB1-201ENST00000302278 KANSL1Q7Z3B3 1105 aa6.85□□□□□ -1.31
ITGB1-201ENST00000302278 CPXM2Q8N436 756 aa6.85□□□□□ -1.31
ITGB1-201ENST00000302278 PNPLA1Q8N8W4 532 aa6.85□□□□□ -1.31
ITGB1-201ENST00000302278 TOE1Q96GM8 510 aaKnown RBP6.85□□□□□ -1.31
ITGB1-201ENST00000302278 MRPL45Q9BRJ2 306 aaKnown RBP6.85□□□□□ -1.31
ITGB1-201ENST00000302278 STOML2Q9UJZ1 356 aa6.85□□□□□ -1.31
ITGB1-201ENST00000302278 TPX2Q9ULW0 747 aaKnown RBP6.85□□□□□ -1.31
ITGB1-201ENST00000302278 SCML2Q9UQR0 700 aa6.85□□□□□ -1.31
ITGB1-201ENST00000302278 STON1Q9Y6Q2 735 aa6.85□□□□□ -1.31
ITGB1-201ENST00000302278 MYO18AQ92614 2054 aaKnown RBP6.85□□□□□ -1.31
ITGB1-201ENST00000302278 HHLA1C9JL84 531 aa6.85□□□□□ -1.31
ITGB1-201ENST00000302278 TLX3O43711 291 aaPredicted RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms