RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 IDH3BO43837 385 aa12.72□□□□□ -0.37
ABCA3-201ENST00000301732 SYDE1Q6ZW31 735 aaPredicted RBP12.72□□□□□ -0.37
ABCA3-201ENST00000301732 ENOSF1Q7L5Y1 443 aa12.72□□□□□ -0.37
ABCA3-201ENST00000301732 TRAPPC11Q7Z392 1133 aa12.72□□□□□ -0.37
ABCA3-201ENST00000301732 CACTIN-AS1Q8N1I8 211 aa12.72□□□□□ -0.37
ABCA3-201ENST00000301732 MASTLQ96GX5 879 aa12.72□□□□□ -0.37
ABCA3-201ENST00000301732 RBBP8Q99708 897 aa12.72□□□□□ -0.37
ABCA3-201ENST00000301732 AVENQ9NQS1 362 aaPredicted RBP12.72□□□□□ -0.37
ABCA3-201ENST00000301732 ABCB10Q9NRK6 738 aa12.72□□□□□ -0.37
ABCA3-201ENST00000301732 EIF3LQ9Y262 564 aaKnown RBP12.72□□□□□ -0.37
ABCA3-201ENST00000301732 AP4S1Q9Y587 144 aa12.72□□□□□ -0.37
ABCA3-201ENST00000301732 NPC1L1Q9UHC9 1359 aa12.72□□□□□ -0.37
ABCA3-201ENST00000301732 F8VZ95 297 aa12.72□□□□□ -0.37
ABCA3-201ENST00000301732 RRM1P23921 792 aa12.72□□□□□ -0.37
ABCA3-201ENST00000301732 NOS3P29474 1203 aa12.72□□□□□ -0.37
ABCA3-201ENST00000301732 SLC1A6P48664 564 aa12.72□□□□□ -0.37
ABCA3-201ENST00000301732 ALDH5A1P51649 535 aaPredicted RBP12.72□□□□□ -0.37
ABCA3-201ENST00000301732 C21orf59P57076 290 aa12.72□□□□□ -0.37
ABCA3-201ENST00000301732 NR6A1Q15406 480 aa12.72□□□□□ -0.37
ABCA3-201ENST00000301732 ARHGAP22Q7Z5H3 698 aa12.72□□□□□ -0.37
ABCA3-201ENST00000301732 TCP10LQ8TDR4 215 aa12.72□□□□□ -0.37
ABCA3-201ENST00000301732 ZSWIM1Q9BR11 485 aa12.72□□□□□ -0.37
ABCA3-201ENST00000301732 KIFC1Q9BW19 673 aa12.72□□□□□ -0.37
ABCA3-201ENST00000301732 TAGLN3Q9UI15 199 aa12.72□□□□□ -0.37
ABCA3-201ENST00000301732 CYP19A1P11511 503 aaPredicted RBP12.72□□□□□ -0.37
ABCA3-201ENST00000301732 DNAJB2P25686 324 aa12.72□□□□□ -0.37
ABCA3-201ENST00000301732 PDK1Q15118 436 aa12.72□□□□□ -0.37
ABCA3-201ENST00000301732 N4BP2L1Q5TBK1 243 aaPredicted RBP12.72□□□□□ -0.37
ABCA3-201ENST00000301732 PGBD2Q6P3X8 592 aa12.72□□□□□ -0.37
ABCA3-201ENST00000301732 SCIMPQ6UWF3 145 aa12.72□□□□□ -0.37
ABCA3-201ENST00000301732 NEK10Q6ZWH5 1172 aa12.72□□□□□ -0.37
ABCA3-201ENST00000301732 PWWP2AQ96N64 755 aa12.72□□□□□ -0.37
ABCA3-201ENST00000301732 MED15Q96RN5 788 aa12.72□□□□□ -0.37
ABCA3-201ENST00000301732 TDRKHQ9Y2W6 561 aaKnown RBP12.72□□□□□ -0.37
ABCA3-201ENST00000301732 O00370 1275 aa12.72□□□□□ -0.37
ABCA3-201ENST00000301732 ATP6V1C1P21283 382 aa12.72□□□□□ -0.37
ABCA3-201ENST00000301732 RGS4P49798 205 aa12.72□□□□□ -0.37
ABCA3-201ENST00000301732 POM121L1PQ3SYA9 428 aa12.72□□□□□ -0.37
ABCA3-201ENST00000301732 TRIM65Q6PJ69 517 aa12.72□□□□□ -0.37
ABCA3-201ENST00000301732 PPP2R3CQ969Q6 453 aa12.72□□□□□ -0.37
ABCA3-201ENST00000301732 CEP44Q9C0F1 390 aa12.72□□□□□ -0.37
ABCA3-201ENST00000301732 TOR3AQ9H497 397 aa12.72□□□□□ -0.37
ABCA3-201ENST00000301732 CLIC5Q9NZA1 410 aa12.72□□□□□ -0.37
ABCA3-201ENST00000301732 PDS5AQ29RF7 1337 aaKnown RBP12.72□□□□□ -0.37
ABCA3-201ENST00000301732 GMFGO60234 142 aa12.71□□□□□ -0.37
ABCA3-201ENST00000301732 PSIP1O75475 530 aaKnown RBP12.71□□□□□ -0.37
ABCA3-201ENST00000301732 PROCP04070 461 aa12.71□□□□□ -0.37
ABCA3-201ENST00000301732 RRM2P31350 389 aa12.71□□□□□ -0.37
ABCA3-201ENST00000301732 FAM172AQ8WUF8 416 aa12.71□□□□□ -0.37
ABCA3-201ENST00000301732 SERPINB12Q96P63 405 aa12.71□□□□□ -0.37
ABCA3-201ENST00000301732 PPP1R10Q96QC0 940 aaKnown RBP12.71□□□□□ -0.37
ABCA3-201ENST00000301732 RNF181Q9P0P0 153 aa12.71□□□□□ -0.37
ABCA3-201ENST00000301732 LYVE1Q9Y5Y7 322 aa12.71□□□□□ -0.37
ABCA3-201ENST00000301732 JCHAINP01591 159 aa12.71□□□□□ -0.37
ABCA3-201ENST00000301732 FAM58BPP0C7Q3 252 aa12.71□□□□□ -0.37
ABCA3-201ENST00000301732 CDH18Q13634 790 aa12.71□□□□□ -0.37
ABCA3-201ENST00000301732 PKN2Q16513 984 aaKnown RBP12.71□□□□□ -0.37
ABCA3-201ENST00000301732 ACAD10Q6JQN1 1059 aa12.71□□□□□ -0.37
ABCA3-201ENST00000301732 LRRC6Q86X45 466 aa12.71□□□□□ -0.37
ABCA3-201ENST00000301732 FBXO30Q8TB52 745 aa12.71□□□□□ -0.37
ABCA3-201ENST00000301732 TAAR1Q96RJ0 339 aa12.71□□□□□ -0.37
ABCA3-201ENST00000301732 CDRT15Q96T59 188 aa12.71□□□□□ -0.37
ABCA3-201ENST00000301732 GPAMQ9HCL2 828 aa12.71□□□□□ -0.37
ABCA3-201ENST00000301732 PCDHGA3Q9Y5H0 932 aa12.71□□□□□ -0.37
ABCA3-201ENST00000301732 ZNF839A8K0R7 811 aa12.71□□□□□ -0.37
ABCA3-201ENST00000301732 AREL1O15033 823 aa12.71□□□□□ -0.37
ABCA3-201ENST00000301732 PHGDHO43175 533 aaKnown RBP12.71□□□□□ -0.37
ABCA3-201ENST00000301732 PLA2G6O60733 806 aa12.71□□□□□ -0.37
ABCA3-201ENST00000301732 TMEM253P0C7T8 217 aa12.71□□□□□ -0.37
ABCA3-201ENST00000301732 THRAP10827 490 aa12.71□□□□□ -0.37
ABCA3-201ENST00000301732 NCF4Q15080 339 aa12.71□□□□□ -0.37
ABCA3-201ENST00000301732 CACHD1Q5VU97 1274 aa12.71□□□□□ -0.37
ABCA3-201ENST00000301732 DSG4Q86SJ6 1040 aa12.71□□□□□ -0.37
ABCA3-201ENST00000301732 MMGT1Q8N4V1 131 aa12.71□□□□□ -0.37
ABCA3-201ENST00000301732 RXFP2Q8WXD0 754 aa12.71□□□□□ -0.37
ABCA3-201ENST00000301732 RSAD1Q9HA92 442 aa12.71□□□□□ -0.37
ABCA3-201ENST00000301732 MAN1C1Q9NR34 630 aa12.71□□□□□ -0.37
ABCA3-201ENST00000301732 KIAA0556O60303 1618 aa12.71□□□□□ -0.38
ABCA3-201ENST00000301732 ALDH1A1P00352 501 aa12.71□□□□□ -0.38
ABCA3-201ENST00000301732 UGP2Q16851 508 aa12.71□□□□□ -0.38
ABCA3-201ENST00000301732 LRRC74BQ6ZQY2 392 aa12.71□□□□□ -0.38
ABCA3-201ENST00000301732 ATG9AQ7Z3C6 839 aa12.71□□□□□ -0.38
ABCA3-201ENST00000301732 OR6Y1Q8NGX8 325 aa12.71□□□□□ -0.38
ABCA3-201ENST00000301732 DIABLOQ9NR28 239 aa12.71□□□□□ -0.38
ABCA3-201ENST00000301732 TRPC5OSA6NMA1 111 aa12.71□□□□□ -0.38
ABCA3-201ENST00000301732 YWHAZP63104 245 aaKnown RBP12.71□□□□□ -0.38
ABCA3-201ENST00000301732 CCSAPQ6IQ19 270 aaPredicted RBP12.71□□□□□ -0.38
ABCA3-201ENST00000301732 GIMAP8Q8ND71 665 aaPredicted RBP12.71□□□□□ -0.38
ABCA3-201ENST00000301732 RHOBTB2Q9BYZ6 727 aa12.71□□□□□ -0.38
ABCA3-201ENST00000301732 TMEM39BQ9GZU3 492 aa12.71□□□□□ -0.38
ABCA3-201ENST00000301732 SLC25A13Q9UJS0 675 aa12.71□□□□□ -0.38
ABCA3-201ENST00000301732 A0A1B0GW55 424 aa12.7□□□□□ -0.38
ABCA3-201ENST00000301732 SOAT2O75908 522 aa12.7□□□□□ -0.38
ABCA3-201ENST00000301732 ASS1P00966 412 aaKnown RBP12.7□□□□□ -0.38
ABCA3-201ENST00000301732 DUX4L2P0CJ85 424 aa12.7□□□□□ -0.38
ABCA3-201ENST00000301732 DUX4L3P0CJ86 424 aa12.7□□□□□ -0.38
ABCA3-201ENST00000301732 DUX4L4P0CJ87 422 aa12.7□□□□□ -0.38
ABCA3-201ENST00000301732 DUX4L5P0CJ88 424 aa12.7□□□□□ -0.38
ABCA3-201ENST00000301732 DUX4L6P0CJ89 424 aa12.7□□□□□ -0.38
ABCA3-201ENST00000301732 DUX4L7P0CJ90 424 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms