RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 PPIDQ08752 370 aaKnown RBP11.82□□□□□ -0.52
TRUB1-201ENST00000298746 PDE1CQ14123 709 aaPredicted RBP11.82□□□□□ -0.52
TRUB1-201ENST00000298746 SLC39A4Q6P5W5 647 aa11.82□□□□□ -0.52
TRUB1-201ENST00000298746 AAGABQ6PD74 315 aa11.82□□□□□ -0.52
TRUB1-201ENST00000298746 TRIM67Q6ZTA4 783 aa11.82□□□□□ -0.52
TRUB1-201ENST00000298746 ZNF276Q8N554 614 aa11.82□□□□□ -0.52
TRUB1-201ENST00000298746 JOSD2Q8TAC2 188 aa11.82□□□□□ -0.52
TRUB1-201ENST00000298746 ATP6V0A1Q93050 837 aa11.82□□□□□ -0.52
TRUB1-201ENST00000298746 KCNK16Q96T55 309 aa11.82□□□□□ -0.52
TRUB1-201ENST00000298746 CCDC28BQ9BUN5 200 aa11.82□□□□□ -0.52
TRUB1-201ENST00000298746 ARHGEF4Q9NR80 690 aa11.82□□□□□ -0.52
TRUB1-201ENST00000298746 PNPOQ9NVS9 261 aa11.82□□□□□ -0.52
TRUB1-201ENST00000298746 DDX43Q9NXZ2 648 aaKnown RBP11.82□□□□□ -0.52
TRUB1-201ENST00000298746 CDH22Q9UJ99 828 aa11.82□□□□□ -0.52
TRUB1-201ENST00000298746 FARP1Q9Y4F1 1045 aaPredicted RBP11.82□□□□□ -0.52
TRUB1-201ENST00000298746 A0A088AWK7 358 aa11.82□□□□□ -0.52
TRUB1-201ENST00000298746 FLOT2Q14254 428 aa11.82□□□□□ -0.52
TRUB1-201ENST00000298746 TMEM259Q4ZIN3 620 aa11.82□□□□□ -0.52
TRUB1-201ENST00000298746 FAM102AQ5T9C2 384 aaPredicted RBP11.82□□□□□ -0.52
TRUB1-201ENST00000298746 N4BP2L1Q5TBK1 243 aaPredicted RBP11.82□□□□□ -0.52
TRUB1-201ENST00000298746 KRT80Q6KB66 452 aa11.82□□□□□ -0.52
TRUB1-201ENST00000298746 PGBD4Q96DM1 585 aa11.82□□□□□ -0.52
TRUB1-201ENST00000298746 COPS7BQ9H9Q2 264 aaPredicted RBP11.82□□□□□ -0.52
TRUB1-201ENST00000298746 PICK1Q9NRD5 415 aa11.82□□□□□ -0.52
TRUB1-201ENST00000298746 ARHGAP26Q9UNA1 814 aa11.82□□□□□ -0.52
TRUB1-201ENST00000298746 PHF24Q9UPV7 400 aa11.82□□□□□ -0.52
TRUB1-201ENST00000298746 POMPQ9Y244 141 aa11.82□□□□□ -0.52
TRUB1-201ENST00000298746 PCDHA10Q9Y5I2 948 aa11.82□□□□□ -0.52
TRUB1-201ENST00000298746 KIF13BQ9NQT8 1826 aa11.82□□□□□ -0.52
TRUB1-201ENST00000298746 PHLPP1O60346 1717 aa11.82□□□□□ -0.52
TRUB1-201ENST00000298746 PMM2O15305 246 aa11.81□□□□□ -0.52
TRUB1-201ENST00000298746 PRPSAP2O60256 369 aa11.81□□□□□ -0.52
TRUB1-201ENST00000298746 JAK3P52333 1124 aa11.81□□□□□ -0.52
TRUB1-201ENST00000298746 HDAC4P56524 1084 aa11.81□□□□□ -0.52
TRUB1-201ENST00000298746 SESN2P58004 480 aaPredicted RBP11.81□□□□□ -0.52
TRUB1-201ENST00000298746 MAP3K10Q02779 954 aa11.81□□□□□ -0.52
TRUB1-201ENST00000298746 DLGAP5Q15398 846 aa11.81□□□□□ -0.52
TRUB1-201ENST00000298746 NADK2Q4G0N4 442 aa11.81□□□□□ -0.52
TRUB1-201ENST00000298746 ZBTB41Q5SVQ8 909 aa11.81□□□□□ -0.52
TRUB1-201ENST00000298746 LRRC38Q5VT99 294 aa11.81□□□□□ -0.52
TRUB1-201ENST00000298746 BBS12Q6ZW61 710 aa11.81□□□□□ -0.52
TRUB1-201ENST00000298746 C4orf19Q8IY42 314 aa11.81□□□□□ -0.52
TRUB1-201ENST00000298746 MCPH1Q8NEM0 835 aa11.81□□□□□ -0.52
TRUB1-201ENST00000298746 JADE3Q92613 823 aa11.81□□□□□ -0.52
TRUB1-201ENST00000298746 USP13Q92995 863 aaPredicted RBP11.81□□□□□ -0.52
TRUB1-201ENST00000298746 ZNF668Q96K58 619 aaPredicted RBP11.81□□□□□ -0.52
TRUB1-201ENST00000298746 GPATCH2LQ9NWQ4 482 aa11.81□□□□□ -0.52
TRUB1-201ENST00000298746 BTBD7Q9P203 1132 aa11.81□□□□□ -0.52
TRUB1-201ENST00000298746 SIN3BO75182 1162 aa11.81□□□□□ -0.52
TRUB1-201ENST00000298746 BPGMP07738 259 aa11.81□□□□□ -0.52
TRUB1-201ENST00000298746 GARTP22102 1010 aa11.81□□□□□ -0.52
TRUB1-201ENST00000298746 TYK2P29597 1187 aa11.81□□□□□ -0.52
TRUB1-201ENST00000298746 FDFT1P37268 417 aa11.81□□□□□ -0.52
TRUB1-201ENST00000298746 INHBCP55103 352 aa11.81□□□□□ -0.52
TRUB1-201ENST00000298746 MCF2L2Q86YR7 1114 aa11.81□□□□□ -0.52
TRUB1-201ENST00000298746 ZDHHC15Q96MV8 337 aa11.81□□□□□ -0.52
TRUB1-201ENST00000298746 SERPINI1Q99574 410 aa11.81□□□□□ -0.52
TRUB1-201ENST00000298746 CCT7Q99832 543 aa11.81□□□□□ -0.52
TRUB1-201ENST00000298746 ADPGKQ9BRR6 497 aa11.81□□□□□ -0.52
TRUB1-201ENST00000298746 CAAP1Q9H8G2 361 aa11.81□□□□□ -0.52
TRUB1-201ENST00000298746 CISHQ9NSE2 258 aa11.81□□□□□ -0.52
TRUB1-201ENST00000298746 COL20A1Q9P218 1284 aa11.81□□□□□ -0.52
TRUB1-201ENST00000298746 THEGQ9P2T0 379 aa11.81□□□□□ -0.52
TRUB1-201ENST00000298746 TJP2Q9UDY2 1190 aa11.81□□□□□ -0.52
TRUB1-201ENST00000298746 FBXO40Q9UH90 709 aa11.81□□□□□ -0.52
TRUB1-201ENST00000298746 NHSL1Q5SYE7 1610 aa11.81□□□□□ -0.52
TRUB1-201ENST00000298746 MYO18AQ92614 2054 aaKnown RBP11.81□□□□□ -0.52
TRUB1-201ENST00000298746 CAPN14A8MX76 684 aa11.8□□□□□ -0.52
TRUB1-201ENST00000298746 ITM2AO43736 263 aa11.8□□□□□ -0.52
TRUB1-201ENST00000298746 STRNO43815 780 aa11.8□□□□□ -0.52
TRUB1-201ENST00000298746 IL1R2P27930 398 aa11.8□□□□□ -0.52
TRUB1-201ENST00000298746 GRIA2P42262 883 aa11.8□□□□□ -0.52
TRUB1-201ENST00000298746 PKNOX1P55347 436 aa11.8□□□□□ -0.52
TRUB1-201ENST00000298746 MYL6P60660 151 aa11.8□□□□□ -0.52
TRUB1-201ENST00000298746 KRT76Q01546 638 aa11.8□□□□□ -0.52
TRUB1-201ENST00000298746 SLC18A2Q05940 514 aa11.8□□□□□ -0.52
TRUB1-201ENST00000298746 ZNF252P-AS1Q0IIN9 211 aa11.8□□□□□ -0.52
TRUB1-201ENST00000298746 SPP2Q13103 211 aa11.8□□□□□ -0.52
TRUB1-201ENST00000298746 ITGA9Q13797 1035 aa11.8□□□□□ -0.52
TRUB1-201ENST00000298746 PRKG1Q13976 671 aa11.8□□□□□ -0.52
TRUB1-201ENST00000298746 TFDP2Q14188 446 aa11.8□□□□□ -0.52
TRUB1-201ENST00000298746 FSCBQ5H9T9 825 aa11.8□□□□□ -0.52
TRUB1-201ENST00000298746 CC2D2BQ6DHV5 1058 aa11.8□□□□□ -0.52
TRUB1-201ENST00000298746 OR6B2Q6IFH4 312 aa11.8□□□□□ -0.52
TRUB1-201ENST00000298746 TRMT10BQ6PF06 316 aaKnown RBP11.8□□□□□ -0.52
TRUB1-201ENST00000298746 KLHDC10Q6PID8 442 aa11.8□□□□□ -0.52
TRUB1-201ENST00000298746 TSHZ1Q6ZSZ6 1077 aa11.8□□□□□ -0.52
TRUB1-201ENST00000298746 SP8Q8IXZ3 490 aa11.8□□□□□ -0.52
TRUB1-201ENST00000298746 CDKL2Q92772 493 aa11.8□□□□□ -0.52
TRUB1-201ENST00000298746 MTMR12Q9C0I1 747 aa11.8□□□□□ -0.52
TRUB1-201ENST00000298746 HERC5Q9UII4 1024 aaKnown RBP11.8□□□□□ -0.52
TRUB1-201ENST00000298746 AP4B1Q9Y6B7 739 aa11.8□□□□□ -0.52
TRUB1-201ENST00000298746 DOT1LQ8TEK3 1739 aa11.8□□□□□ -0.52
TRUB1-201ENST00000298746 LRCH4O75427 683 aa11.8□□□□□ -0.52
TRUB1-201ENST00000298746 RAD17O75943 681 aa11.8□□□□□ -0.52
TRUB1-201ENST00000298746 DHRS4L1P0CG22 281 aa11.8□□□□□ -0.52
TRUB1-201ENST00000298746 MIPP30301 263 aa11.8□□□□□ -0.52
TRUB1-201ENST00000298746 CRADDP78560 199 aa11.8□□□□□ -0.52
TRUB1-201ENST00000298746 TAP1Q03518 808 aa11.8□□□□□ -0.52
TRUB1-201ENST00000298746 ART3Q13508 389 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms