RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 GON4LQ3T8J9 2241 aa26.63■■□□□ 1.85
U2AF1-201ENST00000291552 ACACBO00763 2458 aa26.63■■□□□ 1.85
U2AF1-201ENST00000291552 MDM4O15151 490 aa26.62■■□□□ 1.85
U2AF1-201ENST00000291552 KLF8O95600 359 aaPredicted RBP26.62■■□□□ 1.85
U2AF1-201ENST00000291552 TIE1P35590 1138 aa26.62■■□□□ 1.85
U2AF1-201ENST00000291552 MPLP40238 635 aa26.62■■□□□ 1.85
U2AF1-201ENST00000291552 GRIA2P42262 883 aa26.62■■□□□ 1.85
U2AF1-201ENST00000291552 PRCPP42785 496 aa26.62■■□□□ 1.85
U2AF1-201ENST00000291552 GAD2Q05329 585 aa26.62■■□□□ 1.85
U2AF1-201ENST00000291552 PPP1R26Q5T8A7 1209 aaPredicted RBP26.62■■□□□ 1.85
U2AF1-201ENST00000291552 ZC3H3Q8IXZ2 948 aaKnown RBP26.62■■□□□ 1.85
U2AF1-201ENST00000291552 NAT16Q8N8M0 369 aa26.62■■□□□ 1.85
U2AF1-201ENST00000291552 ERCC4Q92889 916 aaPredicted RBP26.62■■□□□ 1.85
U2AF1-201ENST00000291552 CNOT6LQ96LI5 555 aaKnown RBP26.62■■□□□ 1.85
U2AF1-201ENST00000291552 NACA2Q9H009 215 aa26.62■■□□□ 1.85
U2AF1-201ENST00000291552 HCN2Q9UL51 889 aa26.62■■□□□ 1.85
U2AF1-201ENST00000291552 A0A1W2PQH9 124 aa26.61■■□□□ 1.85
U2AF1-201ENST00000291552 TRIM24O15164 1050 aa26.61■■□□□ 1.85
U2AF1-201ENST00000291552 FOXD2O60548 495 aaPredicted RBP26.61■■□□□ 1.85
U2AF1-201ENST00000291552 ADAM23O75077 832 aa26.61■■□□□ 1.85
U2AF1-201ENST00000291552 TULP3O75386 442 aa26.61■■□□□ 1.85
U2AF1-201ENST00000291552 BCKDHBP21953 392 aa26.61■■□□□ 1.85
U2AF1-201ENST00000291552 KIF11P52732 1056 aa26.61■■□□□ 1.85
U2AF1-201ENST00000291552 PMS1P54277 932 aaKnown RBP26.61■■□□□ 1.85
U2AF1-201ENST00000291552 ZNF394Q53GI3 561 aa26.61■■□□□ 1.85
U2AF1-201ENST00000291552 HTR3DQ70Z44 454 aa26.61■■□□□ 1.85
U2AF1-201ENST00000291552 SCD5Q86SK9 330 aa26.61■■□□□ 1.85
U2AF1-201ENST00000291552 MTPAPQ9NVV4 582 aaKnown RBP eCLIP26.61■■□□□ 1.85
U2AF1-201ENST00000291552 NUDT5Q9UKK9 219 aa26.61■■□□□ 1.85
U2AF1-201ENST00000291552 PCDHA5Q9Y5H7 936 aa26.61■■□□□ 1.85
U2AF1-201ENST00000291552 CEP192Q8TEP8 1941 aa26.61■■□□□ 1.85
U2AF1-201ENST00000291552 PALM2-AKAP2B1ALY0 433 aaPredicted RBP26.6■■□□□ 1.85
U2AF1-201ENST00000291552 AASDHQ4L235 1098 aaPredicted RBP26.6■■□□□ 1.85
U2AF1-201ENST00000291552 COBLL1Q53SF7 1204 aa26.6■■□□□ 1.85
U2AF1-201ENST00000291552 TCEAL6Q6IPX3 200 aa26.6■■□□□ 1.85
U2AF1-201ENST00000291552 SLC4A11Q8NBS3 891 aa26.6■■□□□ 1.85
U2AF1-201ENST00000291552 FBXL13Q8NEE6 735 aa26.6■■□□□ 1.85
U2AF1-201ENST00000291552 OLIG1Q8TAK6 271 aa26.6■■□□□ 1.85
U2AF1-201ENST00000291552 TCEAL3Q969E4 200 aa26.6■■□□□ 1.85
U2AF1-201ENST00000291552 DUSP16Q9BY84 665 aa26.6■■□□□ 1.85
U2AF1-201ENST00000291552 CISHQ9NSE2 258 aa26.6■■□□□ 1.85
U2AF1-201ENST00000291552 PI4KAP42356 2102 aa26.59■■□□□ 1.85
U2AF1-201ENST00000291552 CETN3O15182 167 aa26.59■■□□□ 1.85
U2AF1-201ENST00000291552 EPB41P11171 864 aaKnown RBP26.59■■□□□ 1.85
U2AF1-201ENST00000291552 TNFRSF4P43489 277 aa26.59■■□□□ 1.85
U2AF1-201ENST00000291552 ELF2Q15723 593 aa26.59■■□□□ 1.85
U2AF1-201ENST00000291552 CBWD6Q4V339 395 aa26.59■■□□□ 1.85
U2AF1-201ENST00000291552 CBWD3Q5JTY5 395 aa26.59■■□□□ 1.85
U2AF1-201ENST00000291552 CBWD5Q5RIA9 395 aa26.59■■□□□ 1.85
U2AF1-201ENST00000291552 ZNF658Q5TYW1 1059 aaPredicted RBP26.59■■□□□ 1.85
U2AF1-201ENST00000291552 PMS2CLQ68D20 193 aa26.59■■□□□ 1.85
U2AF1-201ENST00000291552 CCDC150Q8NCX0 1101 aa26.59■■□□□ 1.85
U2AF1-201ENST00000291552 SPATA20Q8TB22 786 aa26.59■■□□□ 1.85
U2AF1-201ENST00000291552 TATDN2Q93075 761 aa26.59■■□□□ 1.85
U2AF1-201ENST00000291552 P2RY11Q96G91 374 aa26.59■■□□□ 1.85
U2AF1-201ENST00000291552 RAB20Q9NX57 234 aa26.59■■□□□ 1.85
U2AF1-201ENST00000291552 USP3Q9Y6I4 520 aa26.59■■□□□ 1.85
U2AF1-201ENST00000291552 EPG5Q9HCE0 2579 aa26.59■■□□□ 1.85
U2AF1-201ENST00000291552 CHD8Q9HCK8 2581 aa26.59■■□□□ 1.85
U2AF1-201ENST00000291552 RARGP13631 454 aa26.58■■□□□ 1.85
U2AF1-201ENST00000291552 TRIM21P19474 475 aaKnown RBP26.58■■□□□ 1.85
U2AF1-201ENST00000291552 ATP5C1P36542 298 aaKnown RBP26.58■■□□□ 1.85
U2AF1-201ENST00000291552 LIMK1P53667 647 aa26.58■■□□□ 1.85
U2AF1-201ENST00000291552 RAD23BP54727 409 aa26.58■■□□□ 1.85
U2AF1-201ENST00000291552 ANO4Q32M45 955 aa26.58■■□□□ 1.85
U2AF1-201ENST00000291552 HSF5Q4G112 596 aaPredicted RBP26.58■■□□□ 1.85
U2AF1-201ENST00000291552 CCDC186Q7Z3E2 898 aa26.58■■□□□ 1.85
U2AF1-201ENST00000291552 TERB1Q8NA31 727 aa26.58■■□□□ 1.85
U2AF1-201ENST00000291552 C12orf50Q8NA57 414 aaPredicted RBP26.58■■□□□ 1.85
U2AF1-201ENST00000291552 RMND1Q9NWS8 449 aa26.58■■□□□ 1.85
U2AF1-201ENST00000291552 BCLAF3A2AJT9 711 aaKnown RBP26.57■■□□□ 1.84
U2AF1-201ENST00000291552 TRIM49BA6NDI0 452 aa26.57■■□□□ 1.84
U2AF1-201ENST00000291552 RHOBTB1O94844 696 aa26.57■■□□□ 1.84
U2AF1-201ENST00000291552 GBP1P32455 592 aa26.57■■□□□ 1.84
U2AF1-201ENST00000291552 PPM1JQ5JR12 505 aa26.57■■□□□ 1.84
U2AF1-201ENST00000291552 ANKRD40Q6AI12 368 aa26.57■■□□□ 1.84
U2AF1-201ENST00000291552 KLHDC10Q6PID8 442 aa26.57■■□□□ 1.84
U2AF1-201ENST00000291552 Q6ZNB5 142 aa26.57■■□□□ 1.84
U2AF1-201ENST00000291552 CCDC34Q96HJ3 373 aa26.57■■□□□ 1.84
U2AF1-201ENST00000291552 FAXDC2Q96IV6 333 aa26.57■■□□□ 1.84
U2AF1-201ENST00000291552 GSDMAQ96QA5 445 aa26.57■■□□□ 1.84
U2AF1-201ENST00000291552 VPS45Q9NRW7 570 aa26.57■■□□□ 1.84
U2AF1-201ENST00000291552 MARK1Q9P0L2 795 aa26.57■■□□□ 1.84
U2AF1-201ENST00000291552 DEC1Q9P2X7 70 aa26.57■■□□□ 1.84
U2AF1-201ENST00000291552 SLC16A3O15427 465 aaKnown RBP26.56■■□□□ 1.84
U2AF1-201ENST00000291552 USP39Q53GS9 565 aaKnown RBP26.56■■□□□ 1.84
U2AF1-201ENST00000291552 C10orf120Q5SQS8 335 aa26.56■■□□□ 1.84
U2AF1-201ENST00000291552 BTBD8Q5XKL5 378 aa26.56■■□□□ 1.84
U2AF1-201ENST00000291552 TTC30AQ86WT1 665 aa26.56■■□□□ 1.84
U2AF1-201ENST00000291552 MIB1Q86YT6 1006 aa26.56■■□□□ 1.84
U2AF1-201ENST00000291552 TMEM176AQ96HP8 235 aa26.56■■□□□ 1.84
U2AF1-201ENST00000291552 HEXIM2Q96MH2 286 aaKnown RBP26.56■■□□□ 1.84
U2AF1-201ENST00000291552 NAGPAQ9UK23 515 aa26.56■■□□□ 1.84
U2AF1-201ENST00000291552 COQ4Q9Y3A0 265 aa26.56■■□□□ 1.84
U2AF1-201ENST00000291552 TBC1D3BA6NDS4 549 aa26.55■■□□□ 1.84
U2AF1-201ENST00000291552 NEDD8-MDP1E9PL57 170 aa26.55■■□□□ 1.84
U2AF1-201ENST00000291552 TM4SF5O14894 197 aa26.55■■□□□ 1.84
U2AF1-201ENST00000291552 CACNG3O60359 315 aa26.55■■□□□ 1.84
U2AF1-201ENST00000291552 STX10O60499 249 aa26.55■■□□□ 1.84
U2AF1-201ENST00000291552 P2RY2P41231 377 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms