RNA–Protein interactions for RNA: ENST00000282470.10

SPARCL1-201, Transcript of SPARC like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARCL1, Length 2,906 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-201ENST00000282470 ELK3P41970 407 aa7.54□□□□□ -1.2
SPARCL1-201ENST00000282470 MAGEA3P43357 314 aa7.54□□□□□ -1.2
SPARCL1-201ENST00000282470 ATP5OP48047 213 aa7.54□□□□□ -1.2
SPARCL1-201ENST00000282470 BNIP1Q12981 228 aa7.54□□□□□ -1.2
SPARCL1-201ENST00000282470 MFSD10Q14728 455 aa7.54□□□□□ -1.2
SPARCL1-201ENST00000282470 CA9Q16790 459 aa7.54□□□□□ -1.2
SPARCL1-201ENST00000282470 CYB5D1Q6P9G0 228 aa7.54□□□□□ -1.2
SPARCL1-201ENST00000282470 CAPN12Q6ZSI9 719 aa7.54□□□□□ -1.2
SPARCL1-201ENST00000282470 ZC3H18Q86VM9 953 aaKnown RBP7.54□□□□□ -1.2
SPARCL1-201ENST00000282470 IGDCC3Q8IVU1 814 aa7.54□□□□□ -1.2
SPARCL1-201ENST00000282470 PALM2Q8IXS6 379 aa7.54□□□□□ -1.2
SPARCL1-201ENST00000282470 C4orf33Q8N1A6 199 aa7.54□□□□□ -1.2
SPARCL1-201ENST00000282470 BANPQ8N9N5 519 aa7.54□□□□□ -1.2
SPARCL1-201ENST00000282470 OR6B3Q8NGW1 331 aa7.54□□□□□ -1.2
SPARCL1-201ENST00000282470 TMEM40Q8WWA1 233 aa7.54□□□□□ -1.2
SPARCL1-201ENST00000282470 SLC44A1Q8WWI5 657 aa7.54□□□□□ -1.2
SPARCL1-201ENST00000282470 HSFY1Q96LI6 401 aa7.54□□□□□ -1.2
SPARCL1-201ENST00000282470 B3GNT5Q9BYG0 378 aa7.54□□□□□ -1.2
SPARCL1-201ENST00000282470 DNAI2Q9GZS0 605 aa7.54□□□□□ -1.2
SPARCL1-201ENST00000282470 NRDE2Q9H7Z3 1164 aa7.54□□□□□ -1.2
SPARCL1-201ENST00000282470 YY1AP1Q9H869 796 aa7.54□□□□□ -1.2
SPARCL1-201ENST00000282470 PRDM16Q9HAZ2 1276 aa7.54□□□□□ -1.2
SPARCL1-201ENST00000282470 TCRBV9S1A1TA0A576 114 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 KCNN4O15554 427 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 DYNC1LI2O43237 492 aaPredicted RBP7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 MGRN1O60291 552 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 GCATO75600 419 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 UBOX5O94941 541 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 IGHA2P01877 340 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 GSTA2P09210 222 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 FAM163BP0C2L3 166 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 ZNF865P0CJ78 1059 aaPredicted RBP7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 CA4P22748 312 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 SKIV2L2P42285 1042 aaKnown RBP7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 MSH2P43246 934 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 NRLP54845 237 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 YWHAZP63104 245 aaKnown RBP7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 ADCY1Q08828 1119 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 MGAT5Q09328 741 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 MAP2K5Q13163 448 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 SLC1A5Q15758 541 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 ZKSCAN8Q15776 578 aaPredicted RBP7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 BBS9Q3SYG4 887 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 SV2CQ496J9 727 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 GLRA4Q5JXX5 417 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 SCYL2Q6P3W7 929 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 C1orf228Q6PIY5 440 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 STRADAQ7RTN6 431 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 BNIPLQ7Z465 357 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 TLK2Q86UE8 772 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 PSTKQ8IV42 348 aaKnown RBP7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 CDKL3Q8IVW4 592 aaPredicted RBP7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 AGGF1Q8N302 714 aaeCLIP7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 ZNF276Q8N554 614 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 MCUQ8NE86 351 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 LRRC39Q96DD0 335 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 QKIQ96PU8 341 aaKnown RBP eCLIP7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 ADAM33Q9BZ11 813 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 PITPNM3Q9BZ71 974 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 TRIM6Q9C030 488 aaPredicted RBP7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 KLC2Q9H0B6 622 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 ZNF408Q9H9D4 720 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 GPATCH2LQ9NWQ4 482 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 MTMR10Q9NXD2 777 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 RCOR3Q9P2K3 495 aaPredicted RBP7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 USP3Q9Y6I4 520 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 COL4A4P53420 1690 aaPredicted RBP7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 KBTBD13C9JR72 458 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 XPO1O14980 1071 aaKnown RBP7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 EDF1O60869 148 aaKnown RBP7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 ZBED1O96006 694 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 CCDC130P13994 396 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 CCNB1P14635 433 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 WARSP23381 471 aaKnown RBP7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 CYP2F1P24903 491 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 RBL1P28749 1068 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 GNL1P36915 607 aaPredicted RBP7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 PSEN2P49810 448 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 TAF6P49848 677 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 NCALDP61601 193 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 SLC45A4Q5BKX6 768 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 OLFML2BQ68BL8 750 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 SH2D5Q6ZV89 423 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 FITM2Q8N6M3 262 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 TOP6BLQ8N6T0 577 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 RMDN2Q96LZ7 410 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 RAB6BQ9NRW1 208 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 ETNK2Q9NVF9 386 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 KLHL14Q9P2G3 628 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 ZNF180Q9UJW8 692 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 PHTF1Q9UMS5 762 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 CHMP2BQ9UQN3 213 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 PIN4Q9Y237 131 aaKnown RBP7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 Q9Y3F1 56 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 TRPM7Q96QT4 1865 aa7.53□□□□□ -1.2
SPARCL1-201ENST00000282470 TRIP12Q14669 1992 aaPredicted RBP7.52□□□□□ -1.2
SPARCL1-201ENST00000282470 TRDMT1O14717 391 aaKnown RBP7.52□□□□□ -1.21
SPARCL1-201ENST00000282470 ALADP13716 330 aa7.52□□□□□ -1.21
SPARCL1-201ENST00000282470 TFE3P19532 575 aaPredicted RBP7.52□□□□□ -1.21
SPARCL1-201ENST00000282470 TPSB2P20231 275 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms