RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 INTS8Q75QN2 995 aaKnown RBP13.48□□□□□ -0.25
CD44-203ENST00000278386 GPRIN1Q7Z2K8 1008 aa13.48□□□□□ -0.25
CD44-203ENST00000278386 TRMT11Q7Z4G4 463 aaKnown RBP13.48□□□□□ -0.25
CD44-203ENST00000278386 ETFBKMTQ8IXQ9 262 aa13.48□□□□□ -0.25
CD44-203ENST00000278386 FAM186BQ8IYM0 893 aa13.48□□□□□ -0.25
CD44-203ENST00000278386 TERB1Q8NA31 727 aa13.48□□□□□ -0.25
CD44-203ENST00000278386 CCDC150Q8NCX0 1101 aa13.48□□□□□ -0.25
CD44-203ENST00000278386 TMEM174Q8WUU8 243 aa13.48□□□□□ -0.25
CD44-203ENST00000278386 RLN3Q8WXF3 142 aa13.48□□□□□ -0.25
CD44-203ENST00000278386 PIGKQ92643 395 aa13.48□□□□□ -0.25
CD44-203ENST00000278386 WBP2Q969T9 261 aa13.48□□□□□ -0.25
CD44-203ENST00000278386 TWNKQ96RR1 684 aa13.48□□□□□ -0.25
CD44-203ENST00000278386 CSNK1G1Q9HCP0 422 aa13.48□□□□□ -0.25
CD44-203ENST00000278386 DNAJC17Q9NVM6 304 aaKnown RBP13.48□□□□□ -0.25
CD44-203ENST00000278386 ANGPTL2Q9UKU9 493 aa13.48□□□□□ -0.25
CD44-203ENST00000278386 HPSEQ9Y251 543 aa13.48□□□□□ -0.25
CD44-203ENST00000278386 C4orf47A7E2U8 309 aa13.47□□□□□ -0.25
CD44-203ENST00000278386 PATE3B3GLJ2 98 aa13.47□□□□□ -0.25
CD44-203ENST00000278386 IKBKBO14920 756 aa13.47□□□□□ -0.25
CD44-203ENST00000278386 KCNK5O95279 499 aa13.47□□□□□ -0.25
CD44-203ENST00000278386 ACO1P21399 889 aaKnown RBP13.47□□□□□ -0.25
CD44-203ENST00000278386 P2RY2P41231 377 aa13.47□□□□□ -0.25
CD44-203ENST00000278386 NDUFA8P51970 172 aa13.47□□□□□ -0.25
CD44-203ENST00000278386 INCA1Q0VD86 236 aa13.47□□□□□ -0.25
CD44-203ENST00000278386 ST3GAL2Q16842 350 aa13.47□□□□□ -0.25
CD44-203ENST00000278386 DAB2IPQ5VWQ8 1189 aa13.47□□□□□ -0.25
CD44-203ENST00000278386 TPGS1Q6ZTW0 290 aa13.47□□□□□ -0.25
CD44-203ENST00000278386 CLEC20AQ6ZU45 233 aa13.47□□□□□ -0.25
CD44-203ENST00000278386 LPCAT2Q7L5N7 544 aa13.47□□□□□ -0.25
CD44-203ENST00000278386 CRYBG2Q8N1P7 616 aa13.47□□□□□ -0.25
CD44-203ENST00000278386 PHTF2Q8N3S3 785 aa13.47□□□□□ -0.25
CD44-203ENST00000278386 OLIG1Q8TAK6 271 aa13.47□□□□□ -0.25
CD44-203ENST00000278386 LSM14BQ9BX40 385 aaKnown RBP13.47□□□□□ -0.25
CD44-203ENST00000278386 NT5C1AQ9BXI3 368 aa13.47□□□□□ -0.25
CD44-203ENST00000278386 DNAI2Q9GZS0 605 aa13.47□□□□□ -0.25
CD44-203ENST00000278386 NIF3L1Q9GZT8 377 aa13.47□□□□□ -0.25
CD44-203ENST00000278386 TMEM9BQ9NQ34 198 aa13.47□□□□□ -0.25
CD44-203ENST00000278386 MAPK8IP1Q9UQF2 711 aa13.47□□□□□ -0.25
CD44-203ENST00000278386 TRAF3IP3Q9Y228 551 aa13.47□□□□□ -0.25
CD44-203ENST00000278386 ATXN2Q99700 1313 aaKnown RBP13.46□□□□□ -0.25
CD44-203ENST00000278386 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.46□□□□□ -0.25
CD44-203ENST00000278386 A0A1W2PQH9 124 aa13.46□□□□□ -0.25
CD44-203ENST00000278386 TM4SF5O14894 197 aa13.46□□□□□ -0.25
CD44-203ENST00000278386 MDM4O15151 490 aa13.46□□□□□ -0.25
CD44-203ENST00000278386 MAPK13O15264 365 aa13.46□□□□□ -0.25
CD44-203ENST00000278386 ADAM23O75077 832 aa13.46□□□□□ -0.25
CD44-203ENST00000278386 RHOBTB3O94955 611 aa13.46□□□□□ -0.25
CD44-203ENST00000278386 TBX18O95935 607 aa13.46□□□□□ -0.25
CD44-203ENST00000278386 CHRM1P11229 460 aaPredicted RBP13.46□□□□□ -0.25
CD44-203ENST00000278386 HOXB2P14652 356 aa13.46□□□□□ -0.25
CD44-203ENST00000278386 PMLP29590 882 aa13.46□□□□□ -0.25
CD44-203ENST00000278386 ATP5C1P36542 298 aaKnown RBP13.46□□□□□ -0.25
CD44-203ENST00000278386 WASP42768 502 aa13.46□□□□□ -0.25
CD44-203ENST00000278386 PGFP49763 221 aa13.46□□□□□ -0.25
CD44-203ENST00000278386 NOVA1P51513 510 aaKnown RBP13.46□□□□□ -0.25
CD44-203ENST00000278386 DPYDQ12882 1025 aa13.46□□□□□ -0.25
CD44-203ENST00000278386 C1orf220Q5T0J3 134 aa13.46□□□□□ -0.25
CD44-203ENST00000278386 TMEM25Q86YD3 366 aa13.46□□□□□ -0.25
CD44-203ENST00000278386 TMEFF1Q8IYR6 380 aa13.46□□□□□ -0.25
CD44-203ENST00000278386 TAS1R2Q8TE23 839 aa13.46□□□□□ -0.25
CD44-203ENST00000278386 CYFIP2Q96F07 1278 aa13.46□□□□□ -0.25
CD44-203ENST00000278386 XPO6Q96QU8 1125 aaKnown RBP13.46□□□□□ -0.25
CD44-203ENST00000278386 HNRNPABQ99729 332 aaKnown RBP13.46□□□□□ -0.25
CD44-203ENST00000278386 BBS2Q9BXC9 721 aa13.46□□□□□ -0.25
CD44-203ENST00000278386 CYP3A43Q9HB55 503 aa13.46□□□□□ -0.25
CD44-203ENST00000278386 APOBEC3GQ9HC16 384 aaKnown RBP13.46□□□□□ -0.25
CD44-203ENST00000278386 SCML2Q9UQR0 700 aa13.46□□□□□ -0.25
CD44-203ENST00000278386 PCDHA5Q9Y5H7 936 aa13.46□□□□□ -0.25
CD44-203ENST00000278386 TRIM24O15164 1050 aa13.45□□□□□ -0.26
CD44-203ENST00000278386 CILPO75339 1184 aa13.45□□□□□ -0.26
CD44-203ENST00000278386 RARGP13631 454 aa13.45□□□□□ -0.26
CD44-203ENST00000278386 TYRP14679 529 aa13.45□□□□□ -0.26
CD44-203ENST00000278386 RPL13P26373 211 aaKnown RBP13.45□□□□□ -0.26
CD44-203ENST00000278386 PSMC2P35998 433 aaKnown RBP13.45□□□□□ -0.26
CD44-203ENST00000278386 PPP3CAQ08209 521 aa13.45□□□□□ -0.26
CD44-203ENST00000278386 ZNF252P-AS1Q0IIN9 211 aa13.45□□□□□ -0.26
CD44-203ENST00000278386 BYSLQ13895 437 aaKnown RBP13.45□□□□□ -0.26
CD44-203ENST00000278386 NFIL3Q16649 462 aa13.45□□□□□ -0.26
CD44-203ENST00000278386 UAP1L1Q3KQV9 507 aa13.45□□□□□ -0.26
CD44-203ENST00000278386 ZNF394Q53GI3 561 aa13.45□□□□□ -0.26
CD44-203ENST00000278386 TRIM61Q5EBN2 209 aa13.45□□□□□ -0.26
CD44-203ENST00000278386 C10orf120Q5SQS8 335 aa13.45□□□□□ -0.26
CD44-203ENST00000278386 EGFLAMQ63HQ2 1017 aa13.45□□□□□ -0.26
CD44-203ENST00000278386 HTR3DQ70Z44 454 aa13.45□□□□□ -0.26
CD44-203ENST00000278386 FRMD1Q8N878 549 aa13.45□□□□□ -0.26
CD44-203ENST00000278386 BHMTQ93088 406 aa13.45□□□□□ -0.26
CD44-203ENST00000278386 ERLEC1Q96DZ1 483 aa13.45□□□□□ -0.26
CD44-203ENST00000278386 DUSP9Q99956 384 aaKnown RBP13.45□□□□□ -0.26
CD44-203ENST00000278386 KLF16Q9BXK1 252 aaPredicted RBP13.45□□□□□ -0.26
CD44-203ENST00000278386 NUSAP1Q9BXS6 441 aaKnown RBP13.45□□□□□ -0.26
CD44-203ENST00000278386 NMUR1Q9HB89 426 aa13.45□□□□□ -0.26
CD44-203ENST00000278386 TMEM8AQ9HCN3 771 aa13.45□□□□□ -0.26
CD44-203ENST00000278386 PNPLA8Q9NP80 782 aa13.45□□□□□ -0.26
CD44-203ENST00000278386 CYLDQ9NQC7 956 aa13.45□□□□□ -0.26
CD44-203ENST00000278386 OSER1Q9NX31 292 aa13.45□□□□□ -0.26
CD44-203ENST00000278386 NAGPAQ9UK23 515 aa13.45□□□□□ -0.26
CD44-203ENST00000278386 NUDT5Q9UKK9 219 aa13.45□□□□□ -0.26
CD44-203ENST00000278386 GON4LQ3T8J9 2241 aa13.44□□□□□ -0.26
CD44-203ENST00000278386 ASCC3Q8N3C0 2202 aaKnown RBP13.44□□□□□ -0.26
CD44-203ENST00000278386 EPG5Q9HCE0 2579 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms