RNA–Protein interactions for RNA: ENST00000277537.10

SEC16A-201, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 3,910 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-201ENST00000277537 EPAS1Q99814 870 aa9.34□□□□□ -0.91
SEC16A-201ENST00000277537 MEIS3P2A8K0S8 358 aa9.34□□□□□ -0.91
SEC16A-201ENST00000277537 KRT37O76014 449 aa9.34□□□□□ -0.91
SEC16A-201ENST00000277537 NPR3P17342 541 aa9.34□□□□□ -0.91
SEC16A-201ENST00000277537 RPL22P35268 128 aaKnown RBP9.34□□□□□ -0.91
SEC16A-201ENST00000277537 CDKN2BP42772 138 aa9.34□□□□□ -0.91
SEC16A-201ENST00000277537 ENPEPQ07075 957 aa9.34□□□□□ -0.91
SEC16A-201ENST00000277537 MOGSQ13724 837 aa9.34□□□□□ -0.91
SEC16A-201ENST00000277537 PRPSAP1Q14558 356 aa9.34□□□□□ -0.91
SEC16A-201ENST00000277537 MORF4L2Q15014 288 aa9.34□□□□□ -0.91
SEC16A-201ENST00000277537 FAM187BQ17R55 369 aa9.34□□□□□ -0.91
SEC16A-201ENST00000277537 KLHL38Q2WGJ6 581 aa9.34□□□□□ -0.91
SEC16A-201ENST00000277537 KCNT2Q6UVM3 1135 aa9.34□□□□□ -0.91
SEC16A-201ENST00000277537 TTC30AQ86WT1 665 aa9.34□□□□□ -0.91
SEC16A-201ENST00000277537 GLIS1Q8NBF1 620 aa9.34□□□□□ -0.91
SEC16A-201ENST00000277537 FBF1Q8TES7 1133 aa9.34□□□□□ -0.91
SEC16A-201ENST00000277537 CELF6Q96J87 481 aaKnown RBP9.34□□□□□ -0.91
SEC16A-201ENST00000277537 CYTH2Q99418 400 aa9.34□□□□□ -0.91
SEC16A-201ENST00000277537 TBCBQ99426 244 aa9.34□□□□□ -0.91
SEC16A-201ENST00000277537 HERPUD2Q9BSE4 406 aa9.34□□□□□ -0.91
SEC16A-201ENST00000277537 PPP1R12CQ9BZL4 782 aa9.34□□□□□ -0.91
SEC16A-201ENST00000277537 FGFR1OP2Q9NVK5 253 aa9.34□□□□□ -0.91
SEC16A-201ENST00000277537 GRHL1Q9NZI5 618 aa9.34□□□□□ -0.91
SEC16A-201ENST00000277537 UBP1Q9NZI7 540 aa9.34□□□□□ -0.91
SEC16A-201ENST00000277537 CYTH4Q9UIA0 394 aa9.34□□□□□ -0.91
SEC16A-201ENST00000277537 DCTN4Q9UJW0 460 aa9.34□□□□□ -0.91
SEC16A-201ENST00000277537 TMEM88BA6NKF7 163 aa9.34□□□□□ -0.91
SEC16A-201ENST00000277537 PAPSS1O43252 624 aaPredicted RBP9.34□□□□□ -0.91
SEC16A-201ENST00000277537 CA12O43570 354 aa9.34□□□□□ -0.91
SEC16A-201ENST00000277537 TRAPPC3O43617 180 aa9.34□□□□□ -0.91
SEC16A-201ENST00000277537 ARL1P40616 181 aaPredicted RBP9.34□□□□□ -0.91
SEC16A-201ENST00000277537 YWHAHQ04917 246 aaPredicted RBP9.34□□□□□ -0.91
SEC16A-201ENST00000277537 ITGA7Q13683 1181 aa9.34□□□□□ -0.91
SEC16A-201ENST00000277537 SDHAF4Q5VUM1 108 aa9.34□□□□□ -0.91
SEC16A-201ENST00000277537 GDF6Q6KF10 455 aaPredicted RBP9.34□□□□□ -0.91
SEC16A-201ENST00000277537 RAPH1Q70E73 1250 aa9.34□□□□□ -0.91
SEC16A-201ENST00000277537 FAM228AQ86W67 206 aa9.34□□□□□ -0.91
SEC16A-201ENST00000277537 ZDHHC14Q8IZN3 488 aa9.34□□□□□ -0.91
SEC16A-201ENST00000277537 MSL3Q8N5Y2 521 aaKnown RBP9.34□□□□□ -0.91
SEC16A-201ENST00000277537 MYCBPAPQ8TBZ2 947 aa9.34□□□□□ -0.91
SEC16A-201ENST00000277537 CD99L2Q8TCZ2 262 aa9.34□□□□□ -0.91
SEC16A-201ENST00000277537 TFB1MQ8WVM0 346 aaKnown RBP9.34□□□□□ -0.91
SEC16A-201ENST00000277537 ROPN1BQ9BZX4 212 aaPredicted RBP9.34□□□□□ -0.91
SEC16A-201ENST00000277537 CXCL16Q9H2A7 254 aa9.34□□□□□ -0.91
SEC16A-201ENST00000277537 ROPN1Q9HAT0 212 aaPredicted RBP9.34□□□□□ -0.91
SEC16A-201ENST00000277537 ARFGEF1Q9Y6D6 1849 aa9.33□□□□□ -0.92
SEC16A-201ENST00000277537 ZC3H4Q9UPT8 1303 aaKnown RBP9.33□□□□□ -0.92
SEC16A-201ENST00000277537 CCDC195A0A1B0GUA6 201 aa9.33□□□□□ -0.92
SEC16A-201ENST00000277537 COPEO14579 308 aa9.33□□□□□ -0.92
SEC16A-201ENST00000277537 PPP1R12AO14974 1030 aaPredicted RBP9.33□□□□□ -0.92
SEC16A-201ENST00000277537 ADCY6O43306 1168 aa9.33□□□□□ -0.92
SEC16A-201ENST00000277537 TROVE2P10155 538 aaKnown RBP eCLIP9.33□□□□□ -0.92
SEC16A-201ENST00000277537 GOT1P17174 413 aa9.33□□□□□ -0.92
SEC16A-201ENST00000277537 HOXA11P31270 313 aaPredicted RBP9.33□□□□□ -0.92
SEC16A-201ENST00000277537 ELK3P41970 407 aa9.33□□□□□ -0.92
SEC16A-201ENST00000277537 PURAQ00577 322 aaKnown RBP9.33□□□□□ -0.92
SEC16A-201ENST00000277537 CFAP157Q5JU67 520 aa9.33□□□□□ -0.92
SEC16A-201ENST00000277537 ANKRD20A3Q5VUR7 823 aa9.33□□□□□ -0.92
SEC16A-201ENST00000277537 BBS12Q6ZW61 710 aa9.33□□□□□ -0.92
SEC16A-201ENST00000277537 ALLCQ8N6M5 410 aa9.33□□□□□ -0.92
SEC16A-201ENST00000277537 CD101Q93033 1021 aa9.33□□□□□ -0.92
SEC16A-201ENST00000277537 RNF157Q96PX1 679 aa9.33□□□□□ -0.92
SEC16A-201ENST00000277537 ZIC5Q96T25 663 aa9.33□□□□□ -0.92
SEC16A-201ENST00000277537 KCNK16Q96T55 309 aa9.33□□□□□ -0.92
SEC16A-201ENST00000277537 TNS1Q9HBL0 1735 aaKnown RBP9.33□□□□□ -0.92
SEC16A-201ENST00000277537 PRDM5Q9NQX1 630 aaPredicted RBP9.33□□□□□ -0.92
SEC16A-201ENST00000277537 SLC12A6Q9UHW9 1150 aa9.33□□□□□ -0.92
SEC16A-201ENST00000277537 TRIM17Q9Y577 477 aa9.33□□□□□ -0.92
SEC16A-201ENST00000277537 NR2E3Q9Y5X4 410 aa9.33□□□□□ -0.92
SEC16A-201ENST00000277537 AVILO75366 819 aa9.33□□□□□ -0.92
SEC16A-201ENST00000277537 KRT4P19013 534 aa9.33□□□□□ -0.92
SEC16A-201ENST00000277537 NOGQ13253 232 aa9.33□□□□□ -0.92
SEC16A-201ENST00000277537 MARCH8Q5T0T0 291 aa9.33□□□□□ -0.92
SEC16A-201ENST00000277537 ZDHHC24Q6UX98 284 aa9.33□□□□□ -0.92
SEC16A-201ENST00000277537 CTU1Q7Z7A3 348 aaKnown RBP9.33□□□□□ -0.92
SEC16A-201ENST00000277537 EIF1ADQ8N9N8 165 aaKnown RBP9.33□□□□□ -0.92
SEC16A-201ENST00000277537 KAT2BQ92831 832 aa9.33□□□□□ -0.92
SEC16A-201ENST00000277537 SERPINB12Q96P63 405 aa9.33□□□□□ -0.92
SEC16A-201ENST00000277537 NFKBIZQ9BYH8 718 aa9.33□□□□□ -0.92
SEC16A-201ENST00000277537 FOCADQ5VW36 1801 aa9.33□□□□□ -0.92
SEC16A-201ENST00000277537 A0A0G2JND7 137 aa9.33□□□□□ -0.92
SEC16A-201ENST00000277537 MYBPHLA2RUH7 354 aa9.33□□□□□ -0.92
SEC16A-201ENST00000277537 SEPT4O43236 478 aa9.33□□□□□ -0.92
SEC16A-201ENST00000277537 LPXNO60711 386 aa9.33□□□□□ -0.92
SEC16A-201ENST00000277537 OR4Q2P0C623 313 aa9.33□□□□□ -0.92
SEC16A-201ENST00000277537 PROZP22891 400 aa9.33□□□□□ -0.92
SEC16A-201ENST00000277537 MAGEA9P43362 315 aa9.33□□□□□ -0.92
SEC16A-201ENST00000277537 DPYSL3Q14195 570 aa9.33□□□□□ -0.92
SEC16A-201ENST00000277537 FASTKD3Q14CZ7 662 aaKnown RBP9.33□□□□□ -0.92
SEC16A-201ENST00000277537 ANKRD20A8PQ5CZ79 823 aa9.33□□□□□ -0.92
SEC16A-201ENST00000277537 LRRC34Q8IZ02 419 aa9.33□□□□□ -0.92
SEC16A-201ENST00000277537 SREK1Q8WXA9 508 aaKnown RBP9.33□□□□□ -0.92
SEC16A-201ENST00000277537 BCO2Q9BYV7 579 aa9.33□□□□□ -0.92
SEC16A-201ENST00000277537 PSMC3IPQ9P2W1 217 aaPredicted RBP9.33□□□□□ -0.92
SEC16A-201ENST00000277537 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.33□□□□□ -0.92
SEC16A-201ENST00000277537 PRRC2BQ5JSZ5 2229 aaKnown RBP9.33□□□□□ -0.92
SEC16A-201ENST00000277537 NT5C1B-RDH14C9J2C7 533 aa9.32□□□□□ -0.92
SEC16A-201ENST00000277537 USP12O75317 370 aa9.32□□□□□ -0.92
SEC16A-201ENST00000277537 ZNF865P0CJ78 1059 aaPredicted RBP9.32□□□□□ -0.92
SEC16A-201ENST00000277537 CHRM1P11229 460 aaPredicted RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms