RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 EPS8L3Q8TE67 593 aaKnown RBP17.33■□□□□ 0.36
CCDC40-201ENST00000269318 RSAD2Q8WXG1 361 aa17.33■□□□□ 0.36
CCDC40-201ENST00000269318 PRCCQ92733 491 aaPredicted RBP17.33■□□□□ 0.36
CCDC40-201ENST00000269318 P3H4Q92791 437 aa17.33■□□□□ 0.36
CCDC40-201ENST00000269318 SLC2A13Q96QE2 648 aa17.33■□□□□ 0.36
CCDC40-201ENST00000269318 RBM15Q96T37 977 aaKnown RBP eCLIP17.33■□□□□ 0.36
CCDC40-201ENST00000269318 ROPN1BQ9BZX4 212 aaPredicted RBP17.33■□□□□ 0.36
CCDC40-201ENST00000269318 ROPN1Q9HAT0 212 aaPredicted RBP17.33■□□□□ 0.36
CCDC40-201ENST00000269318 LRRC4Q9HBW1 653 aa17.33■□□□□ 0.36
CCDC40-201ENST00000269318 SLC12A6Q9UHW9 1150 aa17.33■□□□□ 0.36
CCDC40-201ENST00000269318 INPP5FQ9Y2H2 1132 aa17.33■□□□□ 0.36
CCDC40-201ENST00000269318 PTCH2Q9Y6C5 1203 aa17.33■□□□□ 0.36
CCDC40-201ENST00000269318 FRMPD3Q5JV73 1810 aa17.32■□□□□ 0.36
CCDC40-201ENST00000269318 TDRD15B5MCY1 1934 aaKnown RBP17.32■□□□□ 0.36
CCDC40-201ENST00000269318 C9IYK1 514 aa17.32■□□□□ 0.36
CCDC40-201ENST00000269318 IBSPP21815 317 aaPredicted RBP17.32■□□□□ 0.36
CCDC40-201ENST00000269318 TGM2P21980 687 aa17.32■□□□□ 0.36
CCDC40-201ENST00000269318 PCSK1P29120 753 aa17.32■□□□□ 0.36
CCDC40-201ENST00000269318 HPDP32754 393 aaPredicted RBP17.32■□□□□ 0.36
CCDC40-201ENST00000269318 MAP2K2P36507 400 aa17.32■□□□□ 0.36
CCDC40-201ENST00000269318 BRCC3P46736 316 aa17.32■□□□□ 0.36
CCDC40-201ENST00000269318 TKTL1P51854 596 aa17.32■□□□□ 0.36
CCDC40-201ENST00000269318 CACNA2D1P54289 1103 aa17.32■□□□□ 0.36
CCDC40-201ENST00000269318 GNGT1P63211 74 aa17.32■□□□□ 0.36
CCDC40-201ENST00000269318 RAB41Q5JT25 222 aa17.32■□□□□ 0.36
CCDC40-201ENST00000269318 C6orf118Q5T5N4 469 aa17.32■□□□□ 0.36
CCDC40-201ENST00000269318 MFSD5Q6N075 450 aa17.32■□□□□ 0.36
CCDC40-201ENST00000269318 LRRC31Q6UY01 552 aa17.32■□□□□ 0.36
CCDC40-201ENST00000269318 ARFGAP2Q8N6H7 521 aa17.32■□□□□ 0.36
CCDC40-201ENST00000269318 CCDC185Q8N715 623 aa17.32■□□□□ 0.36
CCDC40-201ENST00000269318 FAM71DQ8N9W8 422 aa17.32■□□□□ 0.36
CCDC40-201ENST00000269318 UROC1Q96N76 676 aa17.32■□□□□ 0.36
CCDC40-201ENST00000269318 AP4E1Q9UPM8 1137 aa17.32■□□□□ 0.36
CCDC40-201ENST00000269318 APOL1O14791 398 aa17.31■□□□□ 0.36
CCDC40-201ENST00000269318 RASGRF2O14827 1237 aa17.31■□□□□ 0.36
CCDC40-201ENST00000269318 EIF3HO15372 352 aaKnown RBP eCLIP17.31■□□□□ 0.36
CCDC40-201ENST00000269318 AP1G2O75843 785 aa17.31■□□□□ 0.36
CCDC40-201ENST00000269318 PAX3P23760 479 aa17.31■□□□□ 0.36
CCDC40-201ENST00000269318 APLP1P51693 650 aa17.31■□□□□ 0.36
CCDC40-201ENST00000269318 ROR1Q01973 937 aa17.31■□□□□ 0.36
CCDC40-201ENST00000269318 PAN2Q504Q3 1202 aaKnown RBP17.31■□□□□ 0.36
CCDC40-201ENST00000269318 TTC19Q6DKK2 380 aaPredicted RBP17.31■□□□□ 0.36
CCDC40-201ENST00000269318 FAM171BQ6P995 826 aa17.31■□□□□ 0.36
CCDC40-201ENST00000269318 PCGF5Q86SE9 256 aa17.31■□□□□ 0.36
CCDC40-201ENST00000269318 SIX6OS1Q8N1H7 587 aa17.31■□□□□ 0.36
CCDC40-201ENST00000269318 SLAIN1Q8ND83 568 aa17.31■□□□□ 0.36
CCDC40-201ENST00000269318 LINC01599Q8WXQ3 324 aa17.31■□□□□ 0.36
CCDC40-201ENST00000269318 FAM149B1Q96BN6 582 aa17.31■□□□□ 0.36
CCDC40-201ENST00000269318 KCNK16Q96T55 309 aa17.31■□□□□ 0.36
CCDC40-201ENST00000269318 NPY6RQ99463 290 aa17.31■□□□□ 0.36
CCDC40-201ENST00000269318 ACBD6Q9BR61 282 aa17.31■□□□□ 0.36
CCDC40-201ENST00000269318 MAGEB5Q9BZ81 275 aa17.31■□□□□ 0.36
CCDC40-201ENST00000269318 HMX1Q9NP08 348 aaPredicted RBP17.31■□□□□ 0.36
CCDC40-201ENST00000269318 TLDC2A0PJX2 215 aa17.31■□□□□ 0.36
CCDC40-201ENST00000269318 HHLA1C9JL84 531 aa17.31■□□□□ 0.36
CCDC40-201ENST00000269318 NRP1O14786 923 aa17.31■□□□□ 0.36
CCDC40-201ENST00000269318 FBXO21O94952 628 aa17.31■□□□□ 0.36
CCDC40-201ENST00000269318 STIP1P31948 543 aaKnown RBP17.31■□□□□ 0.36
CCDC40-201ENST00000269318 NOS2P35228 1153 aa17.31■□□□□ 0.36
CCDC40-201ENST00000269318 MDH1P40925 334 aaKnown RBP17.31■□□□□ 0.36
CCDC40-201ENST00000269318 MAGEA4P43358 317 aa17.31■□□□□ 0.36
CCDC40-201ENST00000269318 CTCFP49711 727 aaPredicted RBP17.31■□□□□ 0.36
CCDC40-201ENST00000269318 SULT1E1P49888 294 aa17.31■□□□□ 0.36
CCDC40-201ENST00000269318 RABGGTBP53611 331 aa17.31■□□□□ 0.36
CCDC40-201ENST00000269318 PPP2R2AP63151 447 aa17.31■□□□□ 0.36
CCDC40-201ENST00000269318 PITX1P78337 314 aaPredicted RBP17.31■□□□□ 0.36
CCDC40-201ENST00000269318 AUHQ13825 339 aaKnown RBP17.31■□□□□ 0.36
CCDC40-201ENST00000269318 DCAF6Q58WW2 860 aa17.31■□□□□ 0.36
CCDC40-201ENST00000269318 PPP6R3Q5H9R7 873 aaPredicted RBP17.31■□□□□ 0.36
CCDC40-201ENST00000269318 C1orf228Q6PIY5 440 aa17.31■□□□□ 0.36
CCDC40-201ENST00000269318 LEKR1Q6ZMV7 388 aa17.31■□□□□ 0.36
CCDC40-201ENST00000269318 GPRIN1Q7Z2K8 1008 aa17.31■□□□□ 0.36
CCDC40-201ENST00000269318 ZC3H18Q86VM9 953 aaKnown RBP17.31■□□□□ 0.36
CCDC40-201ENST00000269318 RSPH1Q8WYR4 309 aa17.31■□□□□ 0.36
CCDC40-201ENST00000269318 CPT1BQ92523 772 aa17.31■□□□□ 0.36
CCDC40-201ENST00000269318 KCTD15Q96SI1 283 aaPredicted RBP17.31■□□□□ 0.36
CCDC40-201ENST00000269318 PKMYT1Q99640 499 aa17.31■□□□□ 0.36
CCDC40-201ENST00000269318 DHX35Q9H5Z1 703 aaKnown RBP17.31■□□□□ 0.36
CCDC40-201ENST00000269318 NRDE2Q9H7Z3 1164 aa17.31■□□□□ 0.36
CCDC40-201ENST00000269318 CSNK1G1Q9HCP0 422 aa17.31■□□□□ 0.36
CCDC40-201ENST00000269318 STARD7Q9NQZ5 370 aa17.31■□□□□ 0.36
CCDC40-201ENST00000269318 RGS16O15492 202 aaPredicted RBP17.3■□□□□ 0.36
CCDC40-201ENST00000269318 TCEA3O75764 348 aa17.3■□□□□ 0.36
CCDC40-201ENST00000269318 ITGB1P05556 798 aa17.3■□□□□ 0.36
CCDC40-201ENST00000269318 FYNP06241 537 aa17.3■□□□□ 0.36
CCDC40-201ENST00000269318 CYP2F1P24903 491 aa17.3■□□□□ 0.36
CCDC40-201ENST00000269318 BCAR1P56945 870 aa17.3■□□□□ 0.36
CCDC40-201ENST00000269318 DAOAP59103 153 aa17.3■□□□□ 0.36
CCDC40-201ENST00000269318 FAM189BP81408 668 aa17.3■□□□□ 0.36
CCDC40-201ENST00000269318 GUCY1A3Q02108 690 aa17.3■□□□□ 0.36
CCDC40-201ENST00000269318 INTS6LQ5JSJ4 861 aaKnown RBP17.3■□□□□ 0.36
CCDC40-201ENST00000269318 DARS2Q6PI48 645 aaKnown RBP17.3■□□□□ 0.36
CCDC40-201ENST00000269318 HFE2Q6ZVN8 426 aa17.3■□□□□ 0.36
CCDC40-201ENST00000269318 NAT8LQ8N9F0 302 aa17.3■□□□□ 0.36
CCDC40-201ENST00000269318 MYLPFQ96A32 169 aa17.3■□□□□ 0.36
CCDC40-201ENST00000269318 SMARCD1Q96GM5 515 aa17.3■□□□□ 0.36
CCDC40-201ENST00000269318 C9orf72Q96LT7 481 aa17.3■□□□□ 0.36
CCDC40-201ENST00000269318 ULBP1Q9BZM6 244 aa17.3■□□□□ 0.36
CCDC40-201ENST00000269318 USP29Q9HBJ7 922 aa17.3■□□□□ 0.36
CCDC40-201ENST00000269318 POPDC2Q9HBU9 364 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms