RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 YWHAGP61981 247 aaKnown RBP eCLIP14.96□□□□□ -0.01
SSBP1-201ENST00000265304 SLC7A9P82251 487 aa14.96□□□□□ -0.01
SSBP1-201ENST00000265304 GFPT1Q06210 699 aaPredicted RBP14.96□□□□□ -0.01
SSBP1-201ENST00000265304 SKIV2LQ15477 1246 aaKnown RBP14.96□□□□□ -0.01
SSBP1-201ENST00000265304 HECTD3Q5T447 861 aa14.96□□□□□ -0.01
SSBP1-201ENST00000265304 FAM183BPQ6ZVS7 135 aa14.96□□□□□ -0.01
SSBP1-201ENST00000265304 CLEC4CQ8WTT0 213 aa14.96□□□□□ -0.01
SSBP1-201ENST00000265304 ATXN2LQ8WWM7 1075 aaKnown RBP14.96□□□□□ -0.01
SSBP1-201ENST00000265304 PPM1EQ8WY54 764 aa14.96□□□□□ -0.01
SSBP1-201ENST00000265304 MRPS31Q92665 395 aaKnown RBP14.96□□□□□ -0.01
SSBP1-201ENST00000265304 FGF13Q92913 245 aa14.96□□□□□ -0.01
SSBP1-201ENST00000265304 TRIM11Q96F44 468 aa14.96□□□□□ -0.01
SSBP1-201ENST00000265304 PIWIL1Q96J94 861 aaKnown RBP14.96□□□□□ -0.01
SSBP1-201ENST00000265304 PHF7Q9BWX1 381 aaPredicted RBP14.96□□□□□ -0.01
SSBP1-201ENST00000265304 CDH7Q9ULB5 785 aa14.96□□□□□ -0.01
SSBP1-201ENST00000265304 FAM50BQ9Y247 325 aa14.96□□□□□ -0.01
SSBP1-201ENST00000265304 F5P12259 2224 aa14.96□□□□□ -0.02
SSBP1-201ENST00000265304 A0A1W2PQH9 124 aa14.95□□□□□ -0.02
SSBP1-201ENST00000265304 AKR1B10O60218 316 aa14.95□□□□□ -0.02
SSBP1-201ENST00000265304 ENDOD1O94919 500 aa14.95□□□□□ -0.02
SSBP1-201ENST00000265304 IGLV3-25P01717 112 aa14.95□□□□□ -0.02
SSBP1-201ENST00000265304 LAMP2P13473 410 aa14.95□□□□□ -0.02
SSBP1-201ENST00000265304 CYLC1P35663 651 aaPredicted RBP14.95□□□□□ -0.02
SSBP1-201ENST00000265304 GALCP54803 685 aa14.95□□□□□ -0.02
SSBP1-201ENST00000265304 AAK1Q2M2I8 961 aa14.95□□□□□ -0.02
SSBP1-201ENST00000265304 CCDC122Q5T0U0 273 aa14.95□□□□□ -0.02
SSBP1-201ENST00000265304 RAD9BQ6WBX8 426 aa14.95□□□□□ -0.02
SSBP1-201ENST00000265304 HFE2Q6ZVN8 426 aa14.95□□□□□ -0.02
SSBP1-201ENST00000265304 NDRG1Q92597 394 aaKnown RBP14.95□□□□□ -0.02
SSBP1-201ENST00000265304 PGAP3Q96FM1 320 aaPredicted RBP14.95□□□□□ -0.02
SSBP1-201ENST00000265304 C11orf70Q9BRQ4 267 aa14.95□□□□□ -0.02
SSBP1-201ENST00000265304 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.95□□□□□ -0.02
SSBP1-201ENST00000265304 DDX23Q9BUQ8 820 aaKnown RBP14.95□□□□□ -0.02
SSBP1-201ENST00000265304 RNF38Q9H0F5 515 aa14.95□□□□□ -0.02
SSBP1-201ENST00000265304 ATXN3LQ9H3M9 355 aa14.95□□□□□ -0.02
SSBP1-201ENST00000265304 POPDC2Q9HBU9 364 aa14.95□□□□□ -0.02
SSBP1-201ENST00000265304 PRDM6Q9NQX0 595 aa14.95□□□□□ -0.02
SSBP1-201ENST00000265304 OLA1Q9NTK5 396 aaKnown RBP14.95□□□□□ -0.02
SSBP1-201ENST00000265304 RRN3Q9NYV6 651 aa14.95□□□□□ -0.02
SSBP1-201ENST00000265304 THEGQ9P2T0 379 aa14.95□□□□□ -0.02
SSBP1-201ENST00000265304 PRKAG3Q9UGI9 489 aa14.95□□□□□ -0.02
SSBP1-201ENST00000265304 UNC80Q8N2C7 3258 aa14.94□□□□□ -0.02
SSBP1-201ENST00000265304 SOWAHDA6NJG2 315 aa14.94□□□□□ -0.02
SSBP1-201ENST00000265304 ARHGAP6O43182 974 aa14.94□□□□□ -0.02
SSBP1-201ENST00000265304 TLR5O60602 858 aa14.94□□□□□ -0.02
SSBP1-201ENST00000265304 RARGP13631 454 aa14.94□□□□□ -0.02
SSBP1-201ENST00000265304 CEBPBP17676 345 aa14.94□□□□□ -0.02
SSBP1-201ENST00000265304 RRM1P23921 792 aa14.94□□□□□ -0.02
SSBP1-201ENST00000265304 NOS2P35228 1153 aa14.94□□□□□ -0.02
SSBP1-201ENST00000265304 MATKP42679 507 aa14.94□□□□□ -0.02
SSBP1-201ENST00000265304 GPC5P78333 572 aa14.94□□□□□ -0.02
SSBP1-201ENST00000265304 CCZ1BP86790 482 aa14.94□□□□□ -0.02
SSBP1-201ENST00000265304 CCZ1P86791 482 aaPredicted RBP14.94□□□□□ -0.02
SSBP1-201ENST00000265304 CCDC173Q0VFZ6 552 aa14.94□□□□□ -0.02
SSBP1-201ENST00000265304 NNTQ13423 1086 aa14.94□□□□□ -0.02
SSBP1-201ENST00000265304 MAMLD1Q13495 774 aa14.94□□□□□ -0.02
SSBP1-201ENST00000265304 TAF5Q15542 800 aa14.94□□□□□ -0.02
SSBP1-201ENST00000265304 TEAD2Q15562 447 aa14.94□□□□□ -0.02
SSBP1-201ENST00000265304 ARHGAP15Q53QZ3 475 aa14.94□□□□□ -0.02
SSBP1-201ENST00000265304 OR6B2Q6IFH4 312 aa14.94□□□□□ -0.02
SSBP1-201ENST00000265304 PTCRAQ6ISU1 281 aaPredicted RBP14.94□□□□□ -0.02
SSBP1-201ENST00000265304 EP400NLQ6ZTU2 488 aa14.94□□□□□ -0.02
SSBP1-201ENST00000265304 OTOP3Q7RTS5 596 aa14.94□□□□□ -0.02
SSBP1-201ENST00000265304 ZDHHC14Q8IZN3 488 aa14.94□□□□□ -0.02
SSBP1-201ENST00000265304 CMTM8Q8IZV2 173 aa14.94□□□□□ -0.02
SSBP1-201ENST00000265304 FNIP1Q8TF40 1166 aa14.94□□□□□ -0.02
SSBP1-201ENST00000265304 CENPIQ92674 756 aaPredicted RBP14.94□□□□□ -0.02
SSBP1-201ENST00000265304 ZFRQ96KR1 1074 aaKnown RBP14.94□□□□□ -0.02
SSBP1-201ENST00000265304 GCNAQ96QF7 691 aa14.94□□□□□ -0.02
SSBP1-201ENST00000265304 MYADMQ96S97 322 aa14.94□□□□□ -0.02
SSBP1-201ENST00000265304 APOL5Q9BWW9 433 aa14.94□□□□□ -0.02
SSBP1-201ENST00000265304 SYNCQ9H7C4 482 aa14.94□□□□□ -0.02
SSBP1-201ENST00000265304 SEPT11Q9NVA2 429 aaKnown RBP14.94□□□□□ -0.02
SSBP1-201ENST00000265304 PARVAQ9NVD7 372 aa14.94□□□□□ -0.02
SSBP1-201ENST00000265304 OBP2AQ9NY56 170 aa14.94□□□□□ -0.02
SSBP1-201ENST00000265304 ARHGAP26Q9UNA1 814 aa14.94□□□□□ -0.02
SSBP1-201ENST00000265304 TCF20Q9UGU0 1960 aaKnown RBP14.94□□□□□ -0.02
SSBP1-201ENST00000265304 C2orf78A6NCI8 922 aa14.93□□□□□ -0.02
SSBP1-201ENST00000265304 TMEM191CA6NGB0 347 aa14.93□□□□□ -0.02
SSBP1-201ENST00000265304 C2CD4BA6NLJ0 364 aa14.93□□□□□ -0.02
SSBP1-201ENST00000265304 LOC730098B7Z3J9 87 aa14.93□□□□□ -0.02
SSBP1-201ENST00000265304 ANHXE9PGG2 379 aa14.93□□□□□ -0.02
SSBP1-201ENST00000265304 PIK3R2O00459 728 aa14.93□□□□□ -0.02
SSBP1-201ENST00000265304 PJA2O43164 708 aa14.93□□□□□ -0.02
SSBP1-201ENST00000265304 COCHO43405 550 aa14.93□□□□□ -0.02
SSBP1-201ENST00000265304 DAB1O75553 588 aa14.93□□□□□ -0.02
SSBP1-201ENST00000265304 MTA2O94776 668 aa14.93□□□□□ -0.02
SSBP1-201ENST00000265304 H2AFZP0C0S5 128 aa14.93□□□□□ -0.02
SSBP1-201ENST00000265304 TMEM253P0C7T8 217 aa14.93□□□□□ -0.02
SSBP1-201ENST00000265304 RALAP11233 206 aa14.93□□□□□ -0.02
SSBP1-201ENST00000265304 BMP1P13497 986 aa14.93□□□□□ -0.02
SSBP1-201ENST00000265304 HDCP19113 662 aa14.93□□□□□ -0.02
SSBP1-201ENST00000265304 ATP5C1P36542 298 aaKnown RBP14.93□□□□□ -0.02
SSBP1-201ENST00000265304 HADHBP55084 474 aaKnown RBP14.93□□□□□ -0.02
SSBP1-201ENST00000265304 TFF2Q03403 129 aa14.93□□□□□ -0.02
SSBP1-201ENST00000265304 CLUL1Q15846 466 aa14.93□□□□□ -0.02
SSBP1-201ENST00000265304 C2CD6Q53TS8 623 aa14.93□□□□□ -0.02
SSBP1-201ENST00000265304 TXNDC8Q6A555 127 aa14.93□□□□□ -0.02
SSBP1-201ENST00000265304 ZNF662Q6ZS27 426 aa14.93□□□□□ -0.02
SSBP1-201ENST00000265304 H2AFVQ71UI9 128 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms