RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 H7C4K7 107 aa17.27■□□□□ 0.36
PHRF1-201ENST00000264555 E2F6O75461 281 aa17.27■□□□□ 0.36
PHRF1-201ENST00000264555 JCHAINP01591 159 aa17.27■□□□□ 0.36
PHRF1-201ENST00000264555 IL10P22301 178 aa17.27■□□□□ 0.36
PHRF1-201ENST00000264555 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.27■□□□□ 0.36
PHRF1-201ENST00000264555 SHCBP1Q8NEM2 672 aa17.27■□□□□ 0.36
PHRF1-201ENST00000264555 HTR3CQ8WXA8 447 aa17.27■□□□□ 0.36
PHRF1-201ENST00000264555 MAF1Q9H063 256 aa17.27■□□□□ 0.36
PHRF1-201ENST00000264555 NOD2Q9HC29 1040 aa17.27■□□□□ 0.36
PHRF1-201ENST00000264555 ANLNQ9NQW6 1124 aa17.27■□□□□ 0.36
PHRF1-201ENST00000264555 ALDH1A3P47895 512 aa17.27■□□□□ 0.36
PHRF1-201ENST00000264555 MARCKSL1P49006 195 aa17.27■□□□□ 0.36
PHRF1-201ENST00000264555 SLC11A2P49281 568 aa17.27■□□□□ 0.36
PHRF1-201ENST00000264555 PAN2Q504Q3 1202 aaKnown RBP17.27■□□□□ 0.36
PHRF1-201ENST00000264555 AFF4Q9UHB7 1163 aaKnown RBP17.27■□□□□ 0.36
PHRF1-201ENST00000264555 TNFSF9P41273 254 aa17.27■□□□□ 0.35
PHRF1-201ENST00000264555 MGAT5Q09328 741 aa17.27■□□□□ 0.35
PHRF1-201ENST00000264555 ANGPTL8Q6UXH0 198 aa17.27■□□□□ 0.35
PHRF1-201ENST00000264555 BRD8Q9H0E9 1235 aa17.27■□□□□ 0.35
PHRF1-201ENST00000264555 MAGEB16A2A368 324 aa17.27■□□□□ 0.35
PHRF1-201ENST00000264555 CASTOR2A6NHX0 329 aa17.27■□□□□ 0.35
PHRF1-201ENST00000264555 AIM2O14862 343 aa17.27■□□□□ 0.35
PHRF1-201ENST00000264555 NFICP08651 508 aa17.27■□□□□ 0.35
PHRF1-201ENST00000264555 GHRP10912 638 aa17.27■□□□□ 0.35
PHRF1-201ENST00000264555 KRT33BQ14525 404 aa17.27■□□□□ 0.35
PHRF1-201ENST00000264555 UNC45BQ8IWX7 931 aa17.27■□□□□ 0.35
PHRF1-201ENST00000264555 TRPM4Q8TD43 1214 aa17.27■□□□□ 0.35
PHRF1-201ENST00000264555 PBXIP1Q96AQ6 731 aa17.27■□□□□ 0.35
PHRF1-201ENST00000264555 RXFP1Q9HBX9 757 aa17.27■□□□□ 0.35
PHRF1-201ENST00000264555 TRPC5OSA6NMA1 111 aa17.26■□□□□ 0.35
PHRF1-201ENST00000264555 PHEXP78562 749 aa17.26■□□□□ 0.35
PHRF1-201ENST00000264555 AGAP9Q5VTM2 703 aa17.26■□□□□ 0.35
PHRF1-201ENST00000264555 LCA5Q86VQ0 697 aa17.26■□□□□ 0.35
PHRF1-201ENST00000264555 GANCQ8TET4 914 aa17.26■□□□□ 0.35
PHRF1-201ENST00000264555 FBXO32Q969P5 355 aa17.26■□□□□ 0.35
PHRF1-201ENST00000264555 TMA16Q96EY4 203 aaKnown RBP17.26■□□□□ 0.35
PHRF1-201ENST00000264555 DCUN1D1Q96GG9 259 aa17.26■□□□□ 0.35
PHRF1-201ENST00000264555 MANSC4A6NHS7 340 aaPredicted RBP17.26■□□□□ 0.35
PHRF1-201ENST00000264555 TMCC1O94876 653 aa17.26■□□□□ 0.35
PHRF1-201ENST00000264555 ACAT1P24752 427 aaKnown RBP17.26■□□□□ 0.35
PHRF1-201ENST00000264555 HMOX2P30519 316 aa17.26■□□□□ 0.35
PHRF1-201ENST00000264555 SSTR1P30872 391 aa17.26■□□□□ 0.35
PHRF1-201ENST00000264555 NFE2Q16621 373 aaPredicted RBP17.26■□□□□ 0.35
PHRF1-201ENST00000264555 TTC23LQ6PF05 361 aa17.26■□□□□ 0.35
PHRF1-201ENST00000264555 STRA8Q7Z7C7 330 aa17.26■□□□□ 0.35
PHRF1-201ENST00000264555 MBOAT7Q96N66 472 aa17.26■□□□□ 0.35
PHRF1-201ENST00000264555 HACD1B0YJ81 288 aa17.26■□□□□ 0.35
PHRF1-201ENST00000264555 FSCN2O14926 492 aa17.26■□□□□ 0.35
PHRF1-201ENST00000264555 AKR1A1P14550 325 aa17.26■□□□□ 0.35
PHRF1-201ENST00000264555 RFC1P35251 1148 aaPredicted RBP17.26■□□□□ 0.35
PHRF1-201ENST00000264555 COPAP53621 1224 aa17.26■□□□□ 0.35
PHRF1-201ENST00000264555 DPYSL3Q14195 570 aa17.26■□□□□ 0.35
PHRF1-201ENST00000264555 PCYOX1LQ8NBM8 494 aa17.26■□□□□ 0.35
PHRF1-201ENST00000264555 HAO1Q9UJM8 370 aa17.26■□□□□ 0.35
PHRF1-201ENST00000264555 VPS9D1Q9Y2B5 631 aa17.26■□□□□ 0.35
PHRF1-201ENST00000264555 NRCAMQ92823 1304 aa17.26■□□□□ 0.35
PHRF1-201ENST00000264555 ALDH1A1P00352 501 aa17.26■□□□□ 0.35
PHRF1-201ENST00000264555 IRF1P10914 325 aa17.26■□□□□ 0.35
PHRF1-201ENST00000264555 ALDH7A1P49419 539 aaKnown RBP17.26■□□□□ 0.35
PHRF1-201ENST00000264555 TWF1Q12792 350 aa17.26■□□□□ 0.35
PHRF1-201ENST00000264555 ART4Q93070 314 aa17.26■□□□□ 0.35
PHRF1-201ENST00000264555 CINPQ9BW66 212 aaPredicted RBP17.26■□□□□ 0.35
PHRF1-201ENST00000264555 LOC100653049A0A140TA62 436 aa17.25■□□□□ 0.35
PHRF1-201ENST00000264555 ADAMTS3O15072 1205 aa17.25■□□□□ 0.35
PHRF1-201ENST00000264555 LIASO43766 372 aa17.25■□□□□ 0.35
PHRF1-201ENST00000264555 KRT34O76011 436 aa17.25■□□□□ 0.35
PHRF1-201ENST00000264555 RECQL4O94761 1208 aa17.25■□□□□ 0.35
PHRF1-201ENST00000264555 FECHP22830 423 aa17.25■□□□□ 0.35
PHRF1-201ENST00000264555 GRK2P25098 689 aa17.25■□□□□ 0.35
PHRF1-201ENST00000264555 MRNIPQ6NTE8 343 aa17.25■□□□□ 0.35
PHRF1-201ENST00000264555 DEFB106AQ8N104 65 aa17.25■□□□□ 0.35
PHRF1-201ENST00000264555 KREMEN1Q96MU8 473 aa17.25■□□□□ 0.35
PHRF1-201ENST00000264555 PRDM16Q9HAZ2 1276 aa17.25■□□□□ 0.35
PHRF1-201ENST00000264555 PIDD1Q9HB75 910 aa17.25■□□□□ 0.35
PHRF1-201ENST00000264555 IARS2Q9NSE4 1012 aaKnown RBP17.25■□□□□ 0.35
PHRF1-201ENST00000264555 FARP2O94887 1054 aaPredicted RBP17.25■□□□□ 0.35
PHRF1-201ENST00000264555 ERFP50548 548 aa17.25■□□□□ 0.35
PHRF1-201ENST00000264555 ZNF143P52747 638 aaPredicted RBP17.25■□□□□ 0.35
PHRF1-201ENST00000264555 PCBP1Q15365 356 aaKnown RBP eCLIP17.25■□□□□ 0.35
PHRF1-201ENST00000264555 MIB1Q86YT6 1006 aa17.25■□□□□ 0.35
PHRF1-201ENST00000264555 RASGEF1CQ8N431 466 aa17.25■□□□□ 0.35
PHRF1-201ENST00000264555 TINF2Q9BSI4 451 aa17.25■□□□□ 0.35
PHRF1-201ENST00000264555 OLA1Q9NTK5 396 aaKnown RBP17.25■□□□□ 0.35
PHRF1-201ENST00000264555 MYO1DO94832 1006 aa17.25■□□□□ 0.35
PHRF1-201ENST00000264555 ASS1P00966 412 aaKnown RBP17.25■□□□□ 0.35
PHRF1-201ENST00000264555 CPA2P48052 419 aa17.25■□□□□ 0.35
PHRF1-201ENST00000264555 CAPRIN1Q14444 709 aaKnown RBP17.25■□□□□ 0.35
PHRF1-201ENST00000264555 LBRQ14739 615 aaKnown RBP17.25■□□□□ 0.35
PHRF1-201ENST00000264555 SEMA4DQ92854 862 aa17.25■□□□□ 0.35
PHRF1-201ENST00000264555 CENPTQ96BT3 561 aa17.25■□□□□ 0.35
PHRF1-201ENST00000264555 SMARCD1Q96GM5 515 aa17.25■□□□□ 0.35
PHRF1-201ENST00000264555 VANGL2Q9ULK5 521 aa17.25■□□□□ 0.35
PHRF1-201ENST00000264555 TIMM13Q9Y5L4 95 aaPredicted RBP17.25■□□□□ 0.35
PHRF1-201ENST00000264555 SUPT3HB4E1H0 165 aa17.25■□□□□ 0.35
PHRF1-201ENST00000264555 SUPT3HO75486 399 aa17.25■□□□□ 0.35
PHRF1-201ENST00000264555 AMPD1P23109 780 aa17.25■□□□□ 0.35
PHRF1-201ENST00000264555 CTXN3Q4LDR2 81 aa17.25■□□□□ 0.35
PHRF1-201ENST00000264555 OVOS1Q6IE37 1185 aa17.25■□□□□ 0.35
PHRF1-201ENST00000264555 SOCS4Q8WXH5 440 aa17.25■□□□□ 0.35
PHRF1-201ENST00000264555 F5H5T6 163 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms