RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 ZSWIM1Q9BR11 485 aa19.73■□□□□ 0.75
COL4A3BP-201ENST00000261415 NT5C1AQ9BXI3 368 aa19.73■□□□□ 0.75
COL4A3BP-201ENST00000261415 IL23AQ9NPF7 189 aa19.73■□□□□ 0.75
COL4A3BP-201ENST00000261415 TAS2R14Q9NYV8 317 aa19.73■□□□□ 0.75
COL4A3BP-201ENST00000261415 PDP2Q9P2J9 529 aa19.73■□□□□ 0.75
COL4A3BP-201ENST00000261415 DNAJB4Q9UDY4 337 aa19.73■□□□□ 0.75
COL4A3BP-201ENST00000261415 LRCH1Q9Y2L9 728 aa19.73■□□□□ 0.75
COL4A3BP-201ENST00000261415 TPBGLP0DKB5 382 aa19.73■□□□□ 0.75
COL4A3BP-201ENST00000261415 CD300LGQ6UXG3 332 aa19.73■□□□□ 0.75
COL4A3BP-201ENST00000261415 TMC3Q7Z5M5 1100 aa19.73■□□□□ 0.75
COL4A3BP-201ENST00000261415 ADGRF2Q8IZF7 708 aa19.73■□□□□ 0.75
COL4A3BP-201ENST00000261415 OR6B3Q8NGW1 331 aa19.73■□□□□ 0.75
COL4A3BP-201ENST00000261415 HASPINQ8TF76 798 aa19.73■□□□□ 0.75
COL4A3BP-201ENST00000261415 TFAP2BQ92481 460 aa19.73■□□□□ 0.75
COL4A3BP-201ENST00000261415 PACSIN1Q9BY11 444 aa19.73■□□□□ 0.75
COL4A3BP-201ENST00000261415 TMEM165Q9HC07 324 aa19.73■□□□□ 0.75
COL4A3BP-201ENST00000261415 CFHP08603 1231 aa19.72■□□□□ 0.75
COL4A3BP-201ENST00000261415 CD19P15391 556 aa19.72■□□□□ 0.75
COL4A3BP-201ENST00000261415 GSTT1P30711 240 aa19.72■□□□□ 0.75
COL4A3BP-201ENST00000261415 TIGD5Q53EQ6 642 aa19.72■□□□□ 0.75
COL4A3BP-201ENST00000261415 DCLRE1AQ6PJP8 1040 aa19.72■□□□□ 0.75
COL4A3BP-201ENST00000261415 DSTYKQ6XUX3 929 aa19.72■□□□□ 0.75
COL4A3BP-201ENST00000261415 RSPH1Q8WYR4 309 aa19.72■□□□□ 0.75
COL4A3BP-201ENST00000261415 SELENOSQ9BQE4 189 aa19.72■□□□□ 0.75
COL4A3BP-201ENST00000261415 MRPL9Q9BYD2 267 aaKnown RBP19.72■□□□□ 0.75
COL4A3BP-201ENST00000261415 PREBQ9HCU5 417 aa19.72■□□□□ 0.75
COL4A3BP-201ENST00000261415 ATP8B3O60423 1300 aa19.72■□□□□ 0.75
COL4A3BP-201ENST00000261415 FAM170AA1A519 330 aa19.72■□□□□ 0.75
COL4A3BP-201ENST00000261415 TBKBP1A7MCY6 615 aa19.72■□□□□ 0.75
COL4A3BP-201ENST00000261415 F8W810 466 aa19.72■□□□□ 0.75
COL4A3BP-201ENST00000261415 EFCAB14O75071 495 aa19.72■□□□□ 0.75
COL4A3BP-201ENST00000261415 ATP5HO75947 161 aa19.72■□□□□ 0.75
COL4A3BP-201ENST00000261415 ITGB1P05556 798 aa19.72■□□□□ 0.75
COL4A3BP-201ENST00000261415 CCDC166P0CW27 439 aa19.72■□□□□ 0.75
COL4A3BP-201ENST00000261415 SSTR3P32745 418 aaPredicted RBP19.72■□□□□ 0.75
COL4A3BP-201ENST00000261415 UNC93AQ86WB7 457 aa19.72■□□□□ 0.75
COL4A3BP-201ENST00000261415 KLHL7Q8IXQ5 586 aa19.72■□□□□ 0.75
COL4A3BP-201ENST00000261415 NCSTNQ92542 709 aa19.72■□□□□ 0.75
COL4A3BP-201ENST00000261415 GBP5Q96PP8 586 aa19.72■□□□□ 0.75
COL4A3BP-201ENST00000261415 NRDE2Q9H7Z3 1164 aa19.72■□□□□ 0.75
COL4A3BP-201ENST00000261415 LMNAP02545 664 aaKnown RBP19.71■□□□□ 0.75
COL4A3BP-201ENST00000261415 GZMAP12544 262 aa19.71■□□□□ 0.75
COL4A3BP-201ENST00000261415 OR1G1P47890 313 aa19.71■□□□□ 0.75
COL4A3BP-201ENST00000261415 WDR5P61964 334 aaKnown RBP19.71■□□□□ 0.75
COL4A3BP-201ENST00000261415 DEFB103AP81534 67 aa19.71■□□□□ 0.75
COL4A3BP-201ENST00000261415 ZNF365Q70YC5 407 aa19.71■□□□□ 0.75
COL4A3BP-201ENST00000261415 LONP2Q86WA8 852 aa19.71■□□□□ 0.75
COL4A3BP-201ENST00000261415 RNF168Q8IYW5 571 aaPredicted RBP19.71■□□□□ 0.75
COL4A3BP-201ENST00000261415 BADQ92934 168 aa19.71■□□□□ 0.75
COL4A3BP-201ENST00000261415 PPP1R14BQ96C90 147 aa19.71■□□□□ 0.75
COL4A3BP-201ENST00000261415 HCSTQ9UBK5 93 aa19.71■□□□□ 0.75
COL4A3BP-201ENST00000261415 NKX1-2Q9UD57 310 aaPredicted RBP19.71■□□□□ 0.75
COL4A3BP-201ENST00000261415 ARL2BPQ9Y2Y0 163 aa19.71■□□□□ 0.75
COL4A3BP-201ENST00000261415 A8MXQ7 604 aa19.71■□□□□ 0.75
COL4A3BP-201ENST00000261415 I3L4J1 428 aa19.71■□□□□ 0.75
COL4A3BP-201ENST00000261415 HCRTO43612 131 aa19.71■□□□□ 0.75
COL4A3BP-201ENST00000261415 DGKIO75912 1065 aa19.71■□□□□ 0.75
COL4A3BP-201ENST00000261415 BAIAP3O94812 1187 aa19.71■□□□□ 0.75
COL4A3BP-201ENST00000261415 TMCC1O94876 653 aa19.71■□□□□ 0.75
COL4A3BP-201ENST00000261415 GJB6O95452 261 aa19.71■□□□□ 0.75
COL4A3BP-201ENST00000261415 AMHP03971 560 aa19.71■□□□□ 0.75
COL4A3BP-201ENST00000261415 H2AFZP0C0S5 128 aa19.71■□□□□ 0.75
COL4A3BP-201ENST00000261415 WARSP23381 471 aaKnown RBP19.71■□□□□ 0.75
COL4A3BP-201ENST00000261415 GNL1P36915 607 aaPredicted RBP19.71■□□□□ 0.75
COL4A3BP-201ENST00000261415 BRCC3P46736 316 aa19.71■□□□□ 0.75
COL4A3BP-201ENST00000261415 CLEC16AQ2KHT3 1053 aa19.71■□□□□ 0.75
COL4A3BP-201ENST00000261415 MUM1Q2TAK8 710 aa19.71■□□□□ 0.75
COL4A3BP-201ENST00000261415 WSCD1Q658N2 575 aa19.71■□□□□ 0.75
COL4A3BP-201ENST00000261415 H2AFVQ71UI9 128 aa19.71■□□□□ 0.75
COL4A3BP-201ENST00000261415 TOP1MTQ969P6 601 aa19.71■□□□□ 0.75
COL4A3BP-201ENST00000261415 AZIN2Q96A70 460 aa19.71■□□□□ 0.75
COL4A3BP-201ENST00000261415 HEXIM2Q96MH2 286 aaKnown RBP19.71■□□□□ 0.75
COL4A3BP-201ENST00000261415 PRMT1Q99873 361 aaKnown RBP19.71■□□□□ 0.75
COL4A3BP-201ENST00000261415 CCDC28BQ9BUN5 200 aa19.71■□□□□ 0.75
COL4A3BP-201ENST00000261415 SNX25Q9H3E2 840 aa19.71■□□□□ 0.75
COL4A3BP-201ENST00000261415 STXBP5LQ9Y2K9 1186 aa19.71■□□□□ 0.75
COL4A3BP-201ENST00000261415 PTPRDP23468 1912 aa19.7■□□□□ 0.74
COL4A3BP-201ENST00000261415 TMEM189-UBE2V1I3L0A0 370 aa19.7■□□□□ 0.74
COL4A3BP-201ENST00000261415 CYP1A1P04798 512 aaPredicted RBP19.7■□□□□ 0.74
COL4A3BP-201ENST00000261415 UNGP13051 313 aaPredicted RBP19.7■□□□□ 0.74
COL4A3BP-201ENST00000261415 PAX3P23760 479 aa19.7■□□□□ 0.74
COL4A3BP-201ENST00000261415 PPIGQ13427 754 aaKnown RBP eCLIP19.7■□□□□ 0.741e-6■■■□□ 19
COL4A3BP-201ENST00000261415 ZRSR2Q15696 482 aaKnown RBP19.7■□□□□ 0.74
COL4A3BP-201ENST00000261415 MEI1Q5TIA1 1274 aa19.7■□□□□ 0.74
COL4A3BP-201ENST00000261415 TRIM72Q6ZMU5 477 aa19.7■□□□□ 0.74
COL4A3BP-201ENST00000261415 ACOT1Q86TX2 421 aa19.7■□□□□ 0.74
COL4A3BP-201ENST00000261415 OSTM1Q86WC4 334 aa19.7■□□□□ 0.74
COL4A3BP-201ENST00000261415 PASD1Q8IV76 773 aa19.7■□□□□ 0.74
COL4A3BP-201ENST00000261415 LRRC43Q8N309 656 aa19.7■□□□□ 0.74
COL4A3BP-201ENST00000261415 STMN4Q9H169 189 aaPredicted RBP19.7■□□□□ 0.74
COL4A3BP-201ENST00000261415 DPEP3Q9H4B8 488 aa19.7■□□□□ 0.74
COL4A3BP-201ENST00000261415 TXLNGQ9NUQ3 528 aa19.7■□□□□ 0.74
COL4A3BP-201ENST00000261415 ZMYND8Q9ULU4 1186 aaPredicted RBP19.7■□□□□ 0.74
COL4A3BP-201ENST00000261415 PCDHGC3Q9UN70 934 aa19.7■□□□□ 0.74
COL4A3BP-201ENST00000261415 RPL26L1Q9UNX3 145 aaKnown RBP19.7■□□□□ 0.74
COL4A3BP-201ENST00000261415 PRG3Q9Y2Y8 225 aaPredicted RBP19.7■□□□□ 0.74
COL4A3BP-201ENST00000261415 NLRC5Q86WI3 1866 aa19.7■□□□□ 0.74
COL4A3BP-201ENST00000261415 MAGEA13PA6NCF6 341 aa19.69■□□□□ 0.74
COL4A3BP-201ENST00000261415 MED7O43513 233 aa19.69■□□□□ 0.74
COL4A3BP-201ENST00000261415 PEX11AO75192 247 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms