RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 ARHGEF37A1IGU5 675 aa28.85■■■□□ 2.21
CCM2-201ENST00000258781 TRIM43BA6NCK2 446 aa28.85■■■□□ 2.21
CCM2-201ENST00000258781 BEST1O76090 585 aa28.85■■■□□ 2.21
CCM2-201ENST00000258781 PARNO95453 639 aaKnown RBP28.85■■■□□ 2.21
CCM2-201ENST00000258781 MATKP42679 507 aa28.85■■■□□ 2.21
CCM2-201ENST00000258781 MRPS5P82675 430 aaKnown RBP28.85■■■□□ 2.21
CCM2-201ENST00000258781 HIBCHQ6NVY1 386 aaPredicted RBP28.85■■■□□ 2.21
CCM2-201ENST00000258781 TRIM43Q96BQ3 446 aaPredicted RBP28.85■■■□□ 2.21
CCM2-201ENST00000258781 RNF157Q96PX1 679 aa28.85■■■□□ 2.21
CCM2-201ENST00000258781 SEMA4AQ9H3S1 761 aa28.85■■■□□ 2.21
CCM2-201ENST00000258781 PCDH18Q9HCL0 1135 aa28.85■■■□□ 2.21
CCM2-201ENST00000258781 PRDM5Q9NQX1 630 aaPredicted RBP28.85■■■□□ 2.21
CCM2-201ENST00000258781 LOC101059915A0A1B0GWI6 518 aaPredicted RBP28.85■■■□□ 2.21
CCM2-201ENST00000258781 MYBPHLA2RUH7 354 aa28.85■■■□□ 2.21
CCM2-201ENST00000258781 DNALI1O14645 258 aaPredicted RBP28.85■■■□□ 2.21
CCM2-201ENST00000258781 FBXO21O94952 628 aa28.85■■■□□ 2.21
CCM2-201ENST00000258781 MMRN1Q13201 1228 aa28.85■■■□□ 2.21
CCM2-201ENST00000258781 P3H1Q32P28 736 aa28.85■■■□□ 2.21
CCM2-201ENST00000258781 DCLRE1AQ6PJP8 1040 aa28.85■■■□□ 2.21
CCM2-201ENST00000258781 GLB1LQ6UWU2 654 aa28.85■■■□□ 2.21
CCM2-201ENST00000258781 CEP128Q6ZU80 1094 aa28.85■■■□□ 2.21
CCM2-201ENST00000258781 SIX6OS1Q8N1H7 587 aa28.85■■■□□ 2.21
CCM2-201ENST00000258781 PCED1BQ96HM7 432 aa28.85■■■□□ 2.21
CCM2-201ENST00000258781 ACBD6Q9BR61 282 aa28.85■■■□□ 2.21
CCM2-201ENST00000258781 SGK1O00141 431 aa28.84■■■□□ 2.21
CCM2-201ENST00000258781 AP1G2O75843 785 aa28.84■■■□□ 2.21
CCM2-201ENST00000258781 IFFO1Q0D2I5 559 aa28.84■■■□□ 2.21
CCM2-201ENST00000258781 ERMARDQ5T6L9 678 aa28.84■■■□□ 2.21
CCM2-201ENST00000258781 AGBL2Q5U5Z8 902 aa28.84■■■□□ 2.21
CCM2-201ENST00000258781 CCDC25Q86WR0 208 aa28.84■■■□□ 2.21
CCM2-201ENST00000258781 RTP3Q9BQQ7 232 aa28.84■■■□□ 2.21
CCM2-201ENST00000258781 ZNF670Q9BS34 389 aa28.84■■■□□ 2.21
CCM2-201ENST00000258781 TMEM121Q9BTD3 319 aa28.84■■■□□ 2.21
CCM2-201ENST00000258781 TMEM161AQ9NX61 479 aa28.84■■■□□ 2.21
CCM2-201ENST00000258781 SAE1Q9UBE0 346 aaPredicted RBP28.84■■■□□ 2.21
CCM2-201ENST00000258781 MCF2LO15068 1137 aa28.83■■■□□ 2.21
CCM2-201ENST00000258781 RIPK2O43353 540 aa28.83■■■□□ 2.21
CCM2-201ENST00000258781 CAPN2P17655 700 aa28.83■■■□□ 2.21
CCM2-201ENST00000258781 TFE3P19532 575 aaPredicted RBP28.83■■■□□ 2.21
CCM2-201ENST00000258781 MAP3K7CLP57077 242 aa28.83■■■□□ 2.21
CCM2-201ENST00000258781 GLIS1Q8NBF1 620 aa28.83■■■□□ 2.21
CCM2-201ENST00000258781 RSPH1Q8WYR4 309 aa28.83■■■□□ 2.21
CCM2-201ENST00000258781 LAMA2P24043 3122 aaKnown RBP28.83■■■□□ 2.21
CCM2-201ENST00000258781 CHKAP35790 457 aa28.83■■■□□ 2.2
CCM2-201ENST00000258781 BRCC3P46736 316 aa28.83■■■□□ 2.2
CCM2-201ENST00000258781 YWHAZP63104 245 aaKnown RBP28.83■■■□□ 2.2
CCM2-201ENST00000258781 NOMO1Q15155 1222 aa28.83■■■□□ 2.2
CCM2-201ENST00000258781 SLC25A52Q3SY17 297 aa28.83■■■□□ 2.2
CCM2-201ENST00000258781 ZC3H12AQ5D1E8 599 aaKnown RBP28.83■■■□□ 2.2
CCM2-201ENST00000258781 CROCCP2Q86T23 111 aa28.83■■■□□ 2.2
CCM2-201ENST00000258781 HOOK3Q86VS8 718 aa28.83■■■□□ 2.2
CCM2-201ENST00000258781 TRAF3IP1Q8TDR0 691 aaPredicted RBP28.83■■■□□ 2.2
CCM2-201ENST00000258781 FAF2Q96CS3 445 aa28.83■■■□□ 2.2
CCM2-201ENST00000258781 SMARCD1Q96GM5 515 aa28.83■■■□□ 2.2
CCM2-201ENST00000258781 SUSD3Q96L08 255 aa28.83■■■□□ 2.2
CCM2-201ENST00000258781 SMOQ99835 787 aa28.83■■■□□ 2.2
CCM2-201ENST00000258781 GPATCH2LQ9NWQ4 482 aa28.83■■■□□ 2.2
CCM2-201ENST00000258781 I3L4J1 428 aa28.82■■■□□ 2.2
CCM2-201ENST00000258781 B4GALT3O60512 393 aa28.82■■■□□ 2.2
CCM2-201ENST00000258781 PECAM1P16284 738 aaPredicted RBP28.82■■■□□ 2.2
CCM2-201ENST00000258781 IL4RP24394 825 aa28.82■■■□□ 2.2
CCM2-201ENST00000258781 EIF3EP60228 445 aaKnown RBP28.82■■■□□ 2.2
CCM2-201ENST00000258781 SLC29A2Q14542 456 aa28.82■■■□□ 2.2
CCM2-201ENST00000258781 DPYSL2Q16555 572 aa28.82■■■□□ 2.2
CCM2-201ENST00000258781 KCTD16Q68DU8 428 aa28.82■■■□□ 2.2
CCM2-201ENST00000258781 PRUNE1Q86TP1 453 aa28.82■■■□□ 2.2
CCM2-201ENST00000258781 DEFB106AQ8N104 65 aa28.82■■■□□ 2.2
CCM2-201ENST00000258781 CRIPAKQ8N1N5 446 aa28.82■■■□□ 2.2
CCM2-201ENST00000258781 FAM149B1Q96BN6 582 aa28.82■■■□□ 2.2
CCM2-201ENST00000258781 ADAM33Q9BZ11 813 aa28.82■■■□□ 2.2
CCM2-201ENST00000258781 ADAM7Q9H2U9 754 aa28.82■■■□□ 2.2
CCM2-201ENST00000258781 LTBP2Q14767 1821 aa28.81■■■□□ 2.2
CCM2-201ENST00000258781 TYMPP19971 482 aa28.81■■■□□ 2.2
CCM2-201ENST00000258781 TGM2P21980 687 aa28.81■■■□□ 2.2
CCM2-201ENST00000258781 NOS2P35228 1153 aa28.81■■■□□ 2.2
CCM2-201ENST00000258781 TKTL1P51854 596 aa28.81■■■□□ 2.2
CCM2-201ENST00000258781 GPS1Q13098 491 aa28.81■■■□□ 2.2
CCM2-201ENST00000258781 KRT71Q3SY84 523 aa28.81■■■□□ 2.2
CCM2-201ENST00000258781 ANKRD20A8PQ5CZ79 823 aa28.81■■■□□ 2.2
CCM2-201ENST00000258781 INTS6LQ5JSJ4 861 aaKnown RBP28.81■■■□□ 2.2
CCM2-201ENST00000258781 RAB41Q5JT25 222 aa28.81■■■□□ 2.2
CCM2-201ENST00000258781 FAM171BQ6P995 826 aa28.81■■■□□ 2.2
CCM2-201ENST00000258781 RELL1Q8IUW5 271 aa28.81■■■□□ 2.2
CCM2-201ENST00000258781 ZCCHC9Q8N567 271 aaKnown RBP28.81■■■□□ 2.2
CCM2-201ENST00000258781 SLC2A13Q96QE2 648 aa28.81■■■□□ 2.2
CCM2-201ENST00000258781 TMEM109Q9BVC6 243 aa28.81■■■□□ 2.2
CCM2-201ENST00000258781 CDC42EP4Q9H3Q1 356 aaKnown RBP28.81■■■□□ 2.2
CCM2-201ENST00000258781 ELAC1Q9H777 363 aaKnown RBP28.81■■■□□ 2.2
CCM2-201ENST00000258781 TPX2Q9ULW0 747 aaKnown RBP28.81■■■□□ 2.2
CCM2-201ENST00000258781 PTPRDP23468 1912 aa28.81■■■□□ 2.2
CCM2-201ENST00000258781 KIAA0355O15063 1070 aa28.8■■■□□ 2.2
CCM2-201ENST00000258781 TIMP1P01033 207 aa28.8■■■□□ 2.2
CCM2-201ENST00000258781 ZSCAN5DPP0CG00 497 aa28.8■■■□□ 2.2
CCM2-201ENST00000258781 LMAN1P49257 510 aa28.8■■■□□ 2.2
CCM2-201ENST00000258781 CA9Q16790 459 aa28.8■■■□□ 2.2
CCM2-201ENST00000258781 PAN2Q504Q3 1202 aaKnown RBP28.8■■■□□ 2.2
CCM2-201ENST00000258781 EMC10Q5UCC4 262 aa28.8■■■□□ 2.2
CCM2-201ENST00000258781 SH2D3CQ8N5H7 860 aa28.8■■■□□ 2.2
CCM2-201ENST00000258781 URGCPQ8TCY9 931 aa28.8■■■□□ 2.2
CCM2-201ENST00000258781 RSAD2Q8WXG1 361 aa28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms