RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 PADI4Q9UM07 663 aa11.93□□□□□ -0.5
TROAP-201ENST00000257909 TTLL3Q9Y4R7 772 aa11.93□□□□□ -0.5
TROAP-201ENST00000257909 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.92□□□□□ -0.5
TROAP-201ENST00000257909 DDTLA6NHG4 134 aaPredicted RBP11.92□□□□□ -0.5
TROAP-201ENST00000257909 HNRNPDLO14979 420 aaKnown RBP11.92□□□□□ -0.5
TROAP-201ENST00000257909 MCF2LO15068 1137 aa11.92□□□□□ -0.5
TROAP-201ENST00000257909 CHADO15335 359 aa11.92□□□□□ -0.5
TROAP-201ENST00000257909 DHX15O43143 795 aaKnown RBP11.92□□□□□ -0.5
TROAP-201ENST00000257909 SIN3BO75182 1162 aa11.92□□□□□ -0.5
TROAP-201ENST00000257909 TRMUO75648 421 aaKnown RBP11.92□□□□□ -0.5
TROAP-201ENST00000257909 GDF11O95390 407 aa11.92□□□□□ -0.5
TROAP-201ENST00000257909 LSM8O95777 96 aaKnown RBP11.92□□□□□ -0.5
TROAP-201ENST00000257909 C4BPAP04003 597 aaKnown RBP11.92□□□□□ -0.5
TROAP-201ENST00000257909 GYS1P13807 737 aa11.92□□□□□ -0.5
TROAP-201ENST00000257909 ITGB5P18084 799 aa11.92□□□□□ -0.5
TROAP-201ENST00000257909 TNNI1P19237 187 aa11.92□□□□□ -0.5
TROAP-201ENST00000257909 PRKCHP24723 683 aa11.92□□□□□ -0.5
TROAP-201ENST00000257909 NR1H2P55055 460 aa11.92□□□□□ -0.5
TROAP-201ENST00000257909 HDAC4P56524 1084 aa11.92□□□□□ -0.5
TROAP-201ENST00000257909 EIF3EP60228 445 aaKnown RBP11.92□□□□□ -0.5
TROAP-201ENST00000257909 KCNJ11Q14654 390 aa11.92□□□□□ -0.5
TROAP-201ENST00000257909 TAZQ16635 292 aa11.92□□□□□ -0.5
TROAP-201ENST00000257909 HADHQ16836 314 aaKnown RBP11.92□□□□□ -0.5
TROAP-201ENST00000257909 XKR9Q5GH70 373 aa11.92□□□□□ -0.5
TROAP-201ENST00000257909 SPOPLQ6IQ16 392 aa11.92□□□□□ -0.5
TROAP-201ENST00000257909 DENND5BQ6ZUT9 1274 aa11.92□□□□□ -0.5
TROAP-201ENST00000257909 NIPA1Q7RTP0 329 aa11.92□□□□□ -0.5
TROAP-201ENST00000257909 DEFB107AQ8IZN7 70 aa11.92□□□□□ -0.5
TROAP-201ENST00000257909 POU5F2Q8N7G0 328 aa11.92□□□□□ -0.5
TROAP-201ENST00000257909 HIPK4Q8NE63 616 aa11.92□□□□□ -0.5
TROAP-201ENST00000257909 ZNF606Q8WXB4 792 aa11.92□□□□□ -0.5
TROAP-201ENST00000257909 SH2D3AQ9BRG2 576 aa11.92□□□□□ -0.5
TROAP-201ENST00000257909 KIFC3Q9BVG8 833 aa11.92□□□□□ -0.5
TROAP-201ENST00000257909 APOL6Q9BWW8 343 aa11.92□□□□□ -0.5
TROAP-201ENST00000257909 UBAP1Q9NZ09 502 aa11.92□□□□□ -0.5
TROAP-201ENST00000257909 PKD2L1Q9P0L9 805 aa11.92□□□□□ -0.5
TROAP-201ENST00000257909 ZBTB21Q9ULJ3 1066 aa11.92□□□□□ -0.5
TROAP-201ENST00000257909 ANKRD31Q8N7Z5 1873 aa11.92□□□□□ -0.5
TROAP-201ENST00000257909 APOC4-APOC2K7ER74 178 aa11.92□□□□□ -0.5
TROAP-201ENST00000257909 APOC2P02655 101 aa11.92□□□□□ -0.5
TROAP-201ENST00000257909 PRDX6P30041 224 aa11.92□□□□□ -0.5
TROAP-201ENST00000257909 HSPA13P48723 471 aa11.92□□□□□ -0.5
TROAP-201ENST00000257909 MTTPP55157 894 aa11.92□□□□□ -0.5
TROAP-201ENST00000257909 CREB5Q02930 508 aa11.92□□□□□ -0.5
TROAP-201ENST00000257909 TCP10Q12799 353 aa11.92□□□□□ -0.5
TROAP-201ENST00000257909 MTMR2Q13614 643 aa11.92□□□□□ -0.5
TROAP-201ENST00000257909 PSMD6Q15008 389 aa11.92□□□□□ -0.5
TROAP-201ENST00000257909 TDRD10Q5VZ19 366 aaKnown RBP11.92□□□□□ -0.5
TROAP-201ENST00000257909 HPS6Q86YV9 775 aa11.92□□□□□ -0.5
TROAP-201ENST00000257909 CEP70Q8NHQ1 597 aa11.92□□□□□ -0.5
TROAP-201ENST00000257909 CFAP36Q96G28 342 aa11.92□□□□□ -0.5
TROAP-201ENST00000257909 CYP4F11Q9HBI6 524 aa11.92□□□□□ -0.5
TROAP-201ENST00000257909 ANKEF1Q9NU02 776 aa11.92□□□□□ -0.5
TROAP-201ENST00000257909 SH3GLB1Q9Y371 365 aa11.92□□□□□ -0.5
TROAP-201ENST00000257909 AK5Q9Y6K8 562 aa11.92□□□□□ -0.5
TROAP-201ENST00000257909 EXTL3O43909 919 aa11.91□□□□□ -0.5
TROAP-201ENST00000257909 CRTAMO95727 393 aa11.91□□□□□ -0.5
TROAP-201ENST00000257909 SRGAP2CP0DJJ0 459 aa11.91□□□□□ -0.5
TROAP-201ENST00000257909 SRGAP2BP0DMP2 458 aa11.91□□□□□ -0.5
TROAP-201ENST00000257909 ITGAXP20702 1163 aa11.91□□□□□ -0.5
TROAP-201ENST00000257909 KDELR1P24390 212 aa11.91□□□□□ -0.5
TROAP-201ENST00000257909 GALK1P51570 392 aa11.91□□□□□ -0.5
TROAP-201ENST00000257909 PPIDQ08752 370 aaKnown RBP11.91□□□□□ -0.5
TROAP-201ENST00000257909 APOFQ13790 326 aa11.91□□□□□ -0.5
TROAP-201ENST00000257909 TCHHL1Q5QJ38 904 aaPredicted RBP11.91□□□□□ -0.5
TROAP-201ENST00000257909 STXBP5Q5T5C0 1151 aa11.91□□□□□ -0.5
TROAP-201ENST00000257909 ZNF410Q86VK4 478 aa11.91□□□□□ -0.5
TROAP-201ENST00000257909 CROCCP3Q8IVE0 287 aa11.91□□□□□ -0.5
TROAP-201ENST00000257909 NDUFAF2Q8N183 169 aa11.91□□□□□ -0.5
TROAP-201ENST00000257909 ZBTB8BQ8NAP8 495 aaPredicted RBP11.91□□□□□ -0.5
TROAP-201ENST00000257909 USP6NLQ92738 828 aa11.91□□□□□ -0.5
TROAP-201ENST00000257909 MRPL1Q9BYD6 325 aaKnown RBP11.91□□□□□ -0.5
TROAP-201ENST00000257909 ZNF518BQ9C0D4 1074 aa11.91□□□□□ -0.5
TROAP-201ENST00000257909 DNAJC28Q9NX36 388 aa11.91□□□□□ -0.5
TROAP-201ENST00000257909 SLC9A2Q9UBY0 812 aa11.91□□□□□ -0.5
TROAP-201ENST00000257909 DNAJC16Q9Y2G8 782 aa11.91□□□□□ -0.5
TROAP-201ENST00000257909 AP4B1Q9Y6B7 739 aa11.91□□□□□ -0.5
TROAP-201ENST00000257909 KAT6AQ92794 2004 aa11.91□□□□□ -0.5
TROAP-201ENST00000257909 ADCY3O60266 1144 aa11.91□□□□□ -0.5
TROAP-201ENST00000257909 TOM1L1O75674 476 aa11.91□□□□□ -0.5
TROAP-201ENST00000257909 SORBS2O94875 1100 aaKnown RBP11.91□□□□□ -0.5
TROAP-201ENST00000257909 FAM58BPP0C7Q3 252 aa11.91□□□□□ -0.5
TROAP-201ENST00000257909 RBP3P10745 1247 aa11.91□□□□□ -0.5
TROAP-201ENST00000257909 ATP6V1B1P15313 513 aa11.91□□□□□ -0.5
TROAP-201ENST00000257909 SERPINB9P50453 376 aa11.91□□□□□ -0.5
TROAP-201ENST00000257909 SLC25A11Q02978 314 aaKnown RBP11.91□□□□□ -0.5
TROAP-201ENST00000257909 ZCCHC23Q6ZST2 131 aa11.91□□□□□ -0.5
TROAP-201ENST00000257909 TSHZ1Q6ZSZ6 1077 aa11.91□□□□□ -0.5
TROAP-201ENST00000257909 SAMD3Q8N6K7 520 aa11.91□□□□□ -0.5
TROAP-201ENST00000257909 TMEM35BQ8NCS4 154 aa11.91□□□□□ -0.5
TROAP-201ENST00000257909 LRGUKQ96M69 825 aa11.91□□□□□ -0.5
TROAP-201ENST00000257909 HOMER2Q9NSB8 354 aa11.91□□□□□ -0.5
TROAP-201ENST00000257909 ZC3H7BQ9UGR2 993 aaKnown RBP11.91□□□□□ -0.5
TROAP-201ENST00000257909 ARHGAP26Q9UNA1 814 aa11.91□□□□□ -0.5
TROAP-201ENST00000257909 ZNF646O15015 1829 aaPredicted RBP11.9□□□□□ -0.5
TROAP-201ENST00000257909 TMEM150BA6NC51 233 aa11.9□□□□□ -0.5
TROAP-201ENST00000257909 CXorf49A8MYA2 514 aaPredicted RBP11.9□□□□□ -0.5
TROAP-201ENST00000257909 RIMBP2O15034 1052 aa11.9□□□□□ -0.5
TROAP-201ENST00000257909 SLC5A2P31639 672 aa11.9□□□□□ -0.5
TROAP-201ENST00000257909 CRKP46108 304 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms