RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 IL10P22301 178 aa6.96□□□□□ -1.3
PDGFRA-201ENST00000257290 DNAJA1P31689 397 aaKnown RBP6.96□□□□□ -1.3
PDGFRA-201ENST00000257290 TP53BP2Q13625 1128 aa6.96□□□□□ -1.3
PDGFRA-201ENST00000257290 KCNJ12Q14500 433 aa6.96□□□□□ -1.3
PDGFRA-201ENST00000257290 TCEAL6Q6IPX3 200 aa6.96□□□□□ -1.3
PDGFRA-201ENST00000257290 C3orf33Q6P1S2 294 aa6.96□□□□□ -1.3
PDGFRA-201ENST00000257290 XKRXQ6PP77 449 aa6.96□□□□□ -1.3
PDGFRA-201ENST00000257290 SLC30A10Q6XR72 485 aa6.96□□□□□ -1.3
PDGFRA-201ENST00000257290 OR2W6PQ8NHA6 318 aa6.96□□□□□ -1.3
PDGFRA-201ENST00000257290 VPS33AQ96AX1 596 aa6.96□□□□□ -1.3
PDGFRA-201ENST00000257290 HGH1Q9BTY7 390 aa6.96□□□□□ -1.3
PDGFRA-201ENST00000257290 ABCB10Q9NRK6 738 aa6.96□□□□□ -1.3
PDGFRA-201ENST00000257290 FAM207AQ9NSI2 230 aaPredicted RBP6.96□□□□□ -1.3
PDGFRA-201ENST00000257290 LRWD1Q9UFC0 647 aa6.96□□□□□ -1.3
PDGFRA-201ENST00000257290 SNX9Q9Y5X1 595 aa6.96□□□□□ -1.3
PDGFRA-201ENST00000257290 PRAMEF22A3QJZ6 481 aa6.96□□□□□ -1.3
PDGFRA-201ENST00000257290 CCDC85CA6NKD9 419 aa6.96□□□□□ -1.3
PDGFRA-201ENST00000257290 HSD17B3P37058 310 aa6.96□□□□□ -1.3
PDGFRA-201ENST00000257290 NEPROQ6NW34 567 aa6.96□□□□□ -1.3
PDGFRA-201ENST00000257290 ARHGAP36Q6ZRI8 547 aa6.96□□□□□ -1.3
PDGFRA-201ENST00000257290 UTP15Q8TED0 518 aaKnown RBP6.96□□□□□ -1.3
PDGFRA-201ENST00000257290 PIGBQ92521 554 aa6.96□□□□□ -1.3
PDGFRA-201ENST00000257290 ERLEC1Q96DZ1 483 aa6.96□□□□□ -1.3
PDGFRA-201ENST00000257290 TM6SF1Q9BZW5 370 aa6.96□□□□□ -1.3
PDGFRA-201ENST00000257290 SLITRK6Q9H5Y7 841 aa6.96□□□□□ -1.3
PDGFRA-201ENST00000257290 NHEJ1Q9H9Q4 299 aaPredicted RBP6.96□□□□□ -1.3
PDGFRA-201ENST00000257290 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.96□□□□□ -1.3
PDGFRA-201ENST00000257290 UBR1Q8IWV7 1749 aa6.96□□□□□ -1.3
PDGFRA-201ENST00000257290 FAM163BP0C2L3 166 aa6.96□□□□□ -1.3
PDGFRA-201ENST00000257290 NCAM1P13591 858 aa6.96□□□□□ -1.3
PDGFRA-201ENST00000257290 ATF2P15336 505 aa6.96□□□□□ -1.3
PDGFRA-201ENST00000257290 WARSP23381 471 aaKnown RBP6.96□□□□□ -1.3
PDGFRA-201ENST00000257290 YWHABP31946 246 aaKnown RBP6.96□□□□□ -1.3
PDGFRA-201ENST00000257290 PCP4P48539 62 aa6.96□□□□□ -1.3
PDGFRA-201ENST00000257290 CDK18Q07002 472 aa6.96□□□□□ -1.3
PDGFRA-201ENST00000257290 DPPA2Q7Z7J5 298 aa6.96□□□□□ -1.3
PDGFRA-201ENST00000257290 TIGD4Q8IY51 512 aa6.96□□□□□ -1.3
PDGFRA-201ENST00000257290 CCDC36Q8IYA8 594 aa6.96□□□□□ -1.3
PDGFRA-201ENST00000257290 ALLCQ8N6M5 410 aa6.96□□□□□ -1.3
PDGFRA-201ENST00000257290 WDR36Q8NI36 951 aaKnown RBP6.96□□□□□ -1.3
PDGFRA-201ENST00000257290 INPP4AQ96PE3 977 aaPredicted RBP6.96□□□□□ -1.3
PDGFRA-201ENST00000257290 PFDN5Q99471 154 aa6.96□□□□□ -1.3
PDGFRA-201ENST00000257290 ROPN1BQ9BZX4 212 aaPredicted RBP6.96□□□□□ -1.3
PDGFRA-201ENST00000257290 ROPN1Q9HAT0 212 aaPredicted RBP6.96□□□□□ -1.3
PDGFRA-201ENST00000257290 PLK2Q9NYY3 685 aa6.96□□□□□ -1.3
PDGFRA-201ENST00000257290 EXOC1LA0A1B0GW35 172 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 CCDC154A6NI56 674 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 B4E1Z4 1266 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 KPNA3O00505 521 aaPredicted RBP6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 FPGTO14772 594 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 MAGEB3O15480 346 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 KCNJ13O60928 360 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 CFBP00751 764 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 MBP02144 154 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 TPBGLP0DKB5 382 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 NCF2P19878 526 aaPredicted RBP6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 DDX6P26196 483 aaKnown RBP eCLIP6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 GP5P40197 560 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 HADHQ16836 314 aaKnown RBP6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 MINDY4Q4G0A6 757 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 TTC39BQ5VTQ0 682 aaPredicted RBP6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 KDELC1Q6UW63 502 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 CCDC116Q8IYX3 515 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 FAM109AQ8N4B1 249 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 CCDC33Q8N5R6 958 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 FAM118BQ9BPY3 351 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 TCEAL7Q9BRU2 100 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 C12orf10Q9HB07 376 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 GPN3Q9UHW5 284 aaPredicted RBP6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 LNPEPQ9UIQ6 1025 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 SMG5Q9UPR3 1016 aaKnown RBP6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 TMEM120BA0PK00 339 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 SAGE2PA6NJ88 616 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 PODXLO00592 558 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 AP5Z1O43299 807 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 NOL4O94818 638 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 PABPC4LP0CB38 370 aaKnown RBP6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 ANPEPP15144 967 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 NPR3P17342 541 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 CD83Q01151 205 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 GFPT1Q06210 699 aaPredicted RBP6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 AP3B2Q13367 1082 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 KLHL17Q6TDP4 642 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 FRMD7Q6ZUT3 714 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 AHI1Q8N157 1196 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 MSANTD3Q96H12 275 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 MAGEB18Q96M61 343 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 DNAJC18Q9H819 358 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 ZNF225Q9UK10 706 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 SNX3O60493 162 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 PKLRP30613 574 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 HADHAP40939 763 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 CCDC85BQ15834 202 aaPredicted RBP6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 C9orf131Q5VYM1 1079 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 FAM196AQ6ZSG2 479 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 RHOUQ7L0Q8 258 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 NATD1Q8N6N6 113 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 PROX1Q92786 737 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 FAM227BQ96M60 508 aa6.95□□□□□ -1.3
PDGFRA-201ENST00000257290 PPP1R16BQ96T49 567 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms