RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 SLC45A4Q5BKX6 768 aa10.52□□□□□ -0.72
COPB1-201ENST00000249923 CFAP157Q5JU67 520 aa10.52□□□□□ -0.72
COPB1-201ENST00000249923 ATG14Q6ZNE5 492 aa10.52□□□□□ -0.72
COPB1-201ENST00000249923 FBXO27Q8NI29 283 aa10.52□□□□□ -0.72
COPB1-201ENST00000249923 CLEC4CQ8WTT0 213 aa10.52□□□□□ -0.72
COPB1-201ENST00000249923 FAM167AQ96KS9 214 aa10.52□□□□□ -0.72
COPB1-201ENST00000249923 TTC1Q99614 292 aa10.52□□□□□ -0.72
COPB1-201ENST00000249923 TRIM4Q9C037 500 aa10.52□□□□□ -0.72
COPB1-201ENST00000249923 VRTNQ9H8Y1 702 aa10.52□□□□□ -0.72
COPB1-201ENST00000249923 RPF1Q9H9Y2 349 aaKnown RBP10.52□□□□□ -0.72
COPB1-201ENST00000249923 GBA2Q9HCG7 927 aaPredicted RBP10.52□□□□□ -0.72
COPB1-201ENST00000249923 TXLNGQ9NUQ3 528 aa10.52□□□□□ -0.72
COPB1-201ENST00000249923 A0A0G2JLL6 359 aaPredicted RBP10.52□□□□□ -0.73
COPB1-201ENST00000249923 TPBGLP0DKB5 382 aa10.52□□□□□ -0.73
COPB1-201ENST00000249923 PPP1R26Q5T8A7 1209 aaPredicted RBP10.52□□□□□ -0.73
COPB1-201ENST00000249923 TRMT10BQ6PF06 316 aaKnown RBP10.52□□□□□ -0.73
COPB1-201ENST00000249923 GADL1Q6ZQY3 521 aa10.52□□□□□ -0.73
COPB1-201ENST00000249923 PRRT2Q7Z6L0 340 aaPredicted RBP10.52□□□□□ -0.73
COPB1-201ENST00000249923 C7orf31Q8N865 590 aa10.52□□□□□ -0.73
COPB1-201ENST00000249923 NLGN2Q8NFZ4 835 aa10.52□□□□□ -0.73
COPB1-201ENST00000249923 RNF157Q96PX1 679 aa10.52□□□□□ -0.73
COPB1-201ENST00000249923 ADPGKQ9BRR6 497 aa10.52□□□□□ -0.73
COPB1-201ENST00000249923 CADM1Q9BY67 442 aaKnown RBP10.52□□□□□ -0.73
COPB1-201ENST00000249923 SYNCQ9H7C4 482 aa10.52□□□□□ -0.73
COPB1-201ENST00000249923 MANSC1Q9H8J5 431 aa10.52□□□□□ -0.73
COPB1-201ENST00000249923 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.52□□□□□ -0.73
COPB1-201ENST00000249923 CYB561D2O14569 222 aa10.52□□□□□ -0.73
COPB1-201ENST00000249923 ROR1Q01973 937 aa10.52□□□□□ -0.73
COPB1-201ENST00000249923 SURF1Q15526 300 aa10.52□□□□□ -0.73
COPB1-201ENST00000249923 HADHQ16836 314 aaKnown RBP10.52□□□□□ -0.73
COPB1-201ENST00000249923 DSTYKQ6XUX3 929 aa10.52□□□□□ -0.73
COPB1-201ENST00000249923 PALM2Q8IXS6 379 aa10.52□□□□□ -0.73
COPB1-201ENST00000249923 PDIK1LQ8N165 341 aa10.52□□□□□ -0.73
COPB1-201ENST00000249923 PDCD7Q8N8D1 485 aaKnown RBP10.52□□□□□ -0.73
COPB1-201ENST00000249923 MAB21L3Q8N8X9 362 aa10.52□□□□□ -0.73
COPB1-201ENST00000249923 TTC13Q8NBP0 860 aa10.52□□□□□ -0.73
COPB1-201ENST00000249923 CFAP61Q8NHU2 1237 aa10.52□□□□□ -0.73
COPB1-201ENST00000249923 RNF217Q8TC41 542 aa10.52□□□□□ -0.73
COPB1-201ENST00000249923 INPP5DQ92835 1189 aa10.52□□□□□ -0.73
COPB1-201ENST00000249923 RTP4Q96DX8 246 aa10.52□□□□□ -0.73
COPB1-201ENST00000249923 HEXIM2Q96MH2 286 aaKnown RBP10.52□□□□□ -0.73
COPB1-201ENST00000249923 ZMAT2Q96NC0 199 aaKnown RBP10.52□□□□□ -0.73
COPB1-201ENST00000249923 C2orf40Q9H1Z8 148 aa10.52□□□□□ -0.73
COPB1-201ENST00000249923 SLC17A6Q9P2U8 582 aa10.52□□□□□ -0.73
COPB1-201ENST00000249923 NOP56O00567 594 aaKnown RBP10.51□□□□□ -0.73
COPB1-201ENST00000249923 MCF2LO15068 1137 aa10.51□□□□□ -0.73
COPB1-201ENST00000249923 TM9SF1O15321 606 aa10.51□□□□□ -0.73
COPB1-201ENST00000249923 MED7O43513 233 aa10.51□□□□□ -0.73
COPB1-201ENST00000249923 RFPL1O75677 317 aa10.51□□□□□ -0.73
COPB1-201ENST00000249923 WFS1O76024 890 aa10.51□□□□□ -0.73
COPB1-201ENST00000249923 METTL18O95568 372 aa10.51□□□□□ -0.73
COPB1-201ENST00000249923 CSH1P0DML2 217 aa10.51□□□□□ -0.73
COPB1-201ENST00000249923 CSH2P0DML3 217 aa10.51□□□□□ -0.73
COPB1-201ENST00000249923 PDGFRAP16234 1089 aa10.51□□□□□ -0.73
COPB1-201ENST00000249923 SERPINB3P29508 390 aa10.51□□□□□ -0.73
COPB1-201ENST00000249923 MAGEA3P43357 314 aa10.51□□□□□ -0.73
COPB1-201ENST00000249923 HDAC4P56524 1084 aa10.51□□□□□ -0.73
COPB1-201ENST00000249923 KLHL38Q2WGJ6 581 aa10.51□□□□□ -0.73
COPB1-201ENST00000249923 DARS2Q6PI48 645 aaKnown RBP10.51□□□□□ -0.73
COPB1-201ENST00000249923 UNC5BQ8IZJ1 945 aa10.51□□□□□ -0.73
COPB1-201ENST00000249923 NETO2Q8NC67 525 aa10.51□□□□□ -0.73
COPB1-201ENST00000249923 OTUD5Q96G74 571 aa10.51□□□□□ -0.73
COPB1-201ENST00000249923 APOPT1Q96IL0 206 aa10.51□□□□□ -0.73
COPB1-201ENST00000249923 HPDLQ96IR7 371 aa10.51□□□□□ -0.73
COPB1-201ENST00000249923 MRPL45Q9BRJ2 306 aaKnown RBP10.51□□□□□ -0.73
COPB1-201ENST00000249923 FRMD8P1Q9BZ68 369 aaPredicted RBP10.51□□□□□ -0.73
COPB1-201ENST00000249923 VPS11Q9H270 941 aa10.51□□□□□ -0.73
COPB1-201ENST00000249923 ELP3Q9H9T3 547 aa10.51□□□□□ -0.73
COPB1-201ENST00000249923 RSAD1Q9HA92 442 aa10.51□□□□□ -0.73
COPB1-201ENST00000249923 PPCSQ9HAB8 311 aa10.51□□□□□ -0.73
COPB1-201ENST00000249923 ZFP69BQ9UJL9 534 aa10.51□□□□□ -0.73
COPB1-201ENST00000249923 GAS2O43903 313 aaKnown RBP10.51□□□□□ -0.73
COPB1-201ENST00000249923 INSRRP14616 1297 aa10.51□□□□□ -0.73
COPB1-201ENST00000249923 GPD1P21695 349 aa10.51□□□□□ -0.73
COPB1-201ENST00000249923 CBLBQ13191 982 aa10.51□□□□□ -0.73
COPB1-201ENST00000249923 BMPR2Q13873 1038 aa10.51□□□□□ -0.73
COPB1-201ENST00000249923 SCUBE3Q8IX30 993 aa10.51□□□□□ -0.73
COPB1-201ENST00000249923 CCDC110Q8TBZ0 833 aa10.51□□□□□ -0.73
COPB1-201ENST00000249923 SGIP1Q9BQI5 828 aa10.51□□□□□ -0.73
COPB1-201ENST00000249923 CNPY3Q9BT09 278 aa10.51□□□□□ -0.73
COPB1-201ENST00000249923 RNPEPL1Q9HAU8 725 aa10.51□□□□□ -0.73
COPB1-201ENST00000249923 PCDH18Q9HCL0 1135 aa10.51□□□□□ -0.73
COPB1-201ENST00000249923 RAB6BQ9NRW1 208 aa10.51□□□□□ -0.73
COPB1-201ENST00000249923 MARCOQ9UEW3 520 aaPredicted RBP10.51□□□□□ -0.73
COPB1-201ENST00000249923 LNPEPQ9UIQ6 1025 aa10.51□□□□□ -0.73
COPB1-201ENST00000249923 FAM237BA0A1B0GVD1 139 aa10.5□□□□□ -0.73
COPB1-201ENST00000249923 KCNN4O15554 427 aa10.5□□□□□ -0.73
COPB1-201ENST00000249923 LPXNO60711 386 aa10.5□□□□□ -0.73
COPB1-201ENST00000249923 OPHN1O60890 802 aa10.5□□□□□ -0.73
COPB1-201ENST00000249923 DCTN3O75935 186 aa10.5□□□□□ -0.73
COPB1-201ENST00000249923 IL18RAPO95256 599 aa10.5□□□□□ -0.73
COPB1-201ENST00000249923 GSRP00390 522 aa10.5□□□□□ -0.73
COPB1-201ENST00000249923 ADORA2AP29274 412 aa10.5□□□□□ -0.73
COPB1-201ENST00000249923 PHBP35232 272 aa10.5□□□□□ -0.73
COPB1-201ENST00000249923 GBE1Q04446 702 aa10.5□□□□□ -0.73
COPB1-201ENST00000249923 ARHGAP1Q07960 439 aa10.5□□□□□ -0.73
COPB1-201ENST00000249923 KHDC1Q4VXA5 237 aaKnown RBP10.5□□□□□ -0.73
COPB1-201ENST00000249923 SLC9A4Q6AI14 798 aa10.5□□□□□ -0.73
COPB1-201ENST00000249923 LCLAT1Q6UWP7 414 aa10.5□□□□□ -0.73
COPB1-201ENST00000249923 FAM43BQ6ZT52 329 aaPredicted RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms