RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 FAM131BQ86XD5 332 aa16.4■□□□□ 0.22
LRFN1-201ENST00000248668 MAP7D3Q8IWC1 876 aa16.4■□□□□ 0.22
LRFN1-201ENST00000248668 SLC4A5Q9BY07 1137 aa16.4■□□□□ 0.22
LRFN1-201ENST00000248668 MYO18AQ92614 2054 aaKnown RBP16.4■□□□□ 0.22
LRFN1-201ENST00000248668 APRTP07741 180 aa16.4■□□□□ 0.22
LRFN1-201ENST00000248668 CTSHP09668 335 aa16.4■□□□□ 0.22
LRFN1-201ENST00000248668 TKTP29401 623 aaKnown RBP16.4■□□□□ 0.22
LRFN1-201ENST00000248668 TFDP2Q14188 446 aa16.4■□□□□ 0.22
LRFN1-201ENST00000248668 RRAGCQ9HB90 399 aa16.4■□□□□ 0.22
LRFN1-201ENST00000248668 PSMC3IPQ9P2W1 217 aaPredicted RBP16.4■□□□□ 0.22
LRFN1-201ENST00000248668 KIAA1257Q9ULG3 409 aa16.4■□□□□ 0.22
LRFN1-201ENST00000248668 GNEQ9Y223 722 aaKnown RBP16.4■□□□□ 0.22
LRFN1-201ENST00000248668 USP15Q9Y4E8 981 aaPredicted RBP16.4■□□□□ 0.22
LRFN1-201ENST00000248668 KBTBD13C9JR72 458 aa16.4■□□□□ 0.22
LRFN1-201ENST00000248668 RARBP10826 455 aa16.4■□□□□ 0.22
LRFN1-201ENST00000248668 PSEN2P49810 448 aa16.4■□□□□ 0.22
LRFN1-201ENST00000248668 GEMIN4P57678 1058 aaKnown RBP16.4■□□□□ 0.22
LRFN1-201ENST00000248668 PITX1P78337 314 aaPredicted RBP16.4■□□□□ 0.22
LRFN1-201ENST00000248668 RNASELQ05823 741 aaKnown RBP16.4■□□□□ 0.22
LRFN1-201ENST00000248668 NT5DC4Q86YG4 428 aa16.4■□□□□ 0.22
LRFN1-201ENST00000248668 CCDC185Q8N715 623 aa16.4■□□□□ 0.22
LRFN1-201ENST00000248668 PLEKHA5Q9HAU0 1116 aa16.4■□□□□ 0.22
LRFN1-201ENST00000248668 SLC40A1Q9NP59 571 aa16.4■□□□□ 0.22
LRFN1-201ENST00000248668 UBQLN1Q9UMX0 589 aaKnown RBP16.4■□□□□ 0.22
LRFN1-201ENST00000248668 TIMM13Q9Y5L4 95 aaPredicted RBP16.4■□□□□ 0.22
LRFN1-201ENST00000248668 IGF2BP3O00425 579 aaKnown RBP eCLIP16.39■□□□□ 0.21
LRFN1-201ENST00000248668 UBOX5O94941 541 aa16.39■□□□□ 0.21
LRFN1-201ENST00000248668 TAC1P20366 129 aa16.39■□□□□ 0.21
LRFN1-201ENST00000248668 AFF1P51825 1210 aaKnown RBP16.39■□□□□ 0.21
LRFN1-201ENST00000248668 HUNKP57058 714 aa16.39■□□□□ 0.21
LRFN1-201ENST00000248668 ACAP1Q15027 740 aa16.39■□□□□ 0.21
LRFN1-201ENST00000248668 PREPLQ4J6C6 727 aaPredicted RBP16.39■□□□□ 0.21
LRFN1-201ENST00000248668 CGB2Q6NT52 195 aa16.39■□□□□ 0.21
LRFN1-201ENST00000248668 SPATA21Q7Z572 469 aa16.39■□□□□ 0.21
LRFN1-201ENST00000248668 TMEM110Q86TL2 294 aa16.39■□□□□ 0.21
LRFN1-201ENST00000248668 IRAK4Q9NWZ3 460 aa16.39■□□□□ 0.21
LRFN1-201ENST00000248668 HOXD8P13378 290 aaPredicted RBP16.39■□□□□ 0.21
LRFN1-201ENST00000248668 CYP2F1P24903 491 aa16.39■□□□□ 0.21
LRFN1-201ENST00000248668 IL9RQ01113 521 aa16.39■□□□□ 0.21
LRFN1-201ENST00000248668 CTU1Q7Z7A3 348 aaKnown RBP16.39■□□□□ 0.21
LRFN1-201ENST00000248668 RMDN2Q96LZ7 410 aa16.39■□□□□ 0.21
LRFN1-201ENST00000248668 CEP41Q9BYV8 373 aa16.39■□□□□ 0.21
LRFN1-201ENST00000248668 PITPNM3Q9BZ71 974 aa16.39■□□□□ 0.21
LRFN1-201ENST00000248668 PIH1D1Q9NWS0 290 aaKnown RBP16.39■□□□□ 0.21
LRFN1-201ENST00000248668 SLC45A1Q9Y2W3 748 aa16.39■□□□□ 0.21
LRFN1-201ENST00000248668 FAM155BO75949 473 aa16.38■□□□□ 0.21
LRFN1-201ENST00000248668 GCKP35557 465 aa16.38■□□□□ 0.21
LRFN1-201ENST00000248668 MSH2P43246 934 aa16.38■□□□□ 0.21
LRFN1-201ENST00000248668 BOLA3Q53S33 107 aa16.38■□□□□ 0.21
LRFN1-201ENST00000248668 PPP1R21Q6ZMI0 780 aa16.38■□□□□ 0.21
LRFN1-201ENST00000248668 HOMEZQ8IX15 550 aa16.38■□□□□ 0.21
LRFN1-201ENST00000248668 CTAGE3PQ8IX95 158 aa16.38■□□□□ 0.21
LRFN1-201ENST00000248668 APPL2Q8NEU8 664 aa16.38■□□□□ 0.21
LRFN1-201ENST00000248668 USP29Q9HBJ7 922 aa16.38■□□□□ 0.21
LRFN1-201ENST00000248668 ETNK2Q9NVF9 386 aa16.38■□□□□ 0.21
LRFN1-201ENST00000248668 CNTN3Q9P232 1028 aa16.38■□□□□ 0.21
LRFN1-201ENST00000248668 IPPQ9Y573 584 aa16.38■□□□□ 0.21
LRFN1-201ENST00000248668 SMIM35A0A1B0GVV1 85 aa16.38■□□□□ 0.21
LRFN1-201ENST00000248668 SLC15A5A6NIM6 579 aa16.38■□□□□ 0.21
LRFN1-201ENST00000248668 ENDOD1O94919 500 aa16.38■□□□□ 0.21
LRFN1-201ENST00000248668 STAU1O95793 577 aaKnown RBP16.38■□□□□ 0.21
LRFN1-201ENST00000248668 PHBP35232 272 aa16.38■□□□□ 0.21
LRFN1-201ENST00000248668 NDUFV1P49821 464 aa16.38■□□□□ 0.21
LRFN1-201ENST00000248668 CCNHP51946 323 aaPredicted RBP16.38■□□□□ 0.21
LRFN1-201ENST00000248668 MAP2K5Q13163 448 aa16.38■□□□□ 0.21
LRFN1-201ENST00000248668 STILQ15468 1287 aa16.38■□□□□ 0.21
LRFN1-201ENST00000248668 TAF1CQ15572 869 aaPredicted RBP16.38■□□□□ 0.21
LRFN1-201ENST00000248668 AGGF1Q8N302 714 aaeCLIP16.38■□□□□ 0.21
LRFN1-201ENST00000248668 MAGEB18Q96M61 343 aa16.38■□□□□ 0.21
LRFN1-201ENST00000248668 TBCBQ99426 244 aa16.38■□□□□ 0.21
LRFN1-201ENST00000248668 BEST1O76090 585 aa16.38■□□□□ 0.21
LRFN1-201ENST00000248668 ADIGQ0VDE8 80 aa16.38■□□□□ 0.21
LRFN1-201ENST00000248668 KBTBD12Q3ZCT8 623 aa16.38■□□□□ 0.21
LRFN1-201ENST00000248668 APBB1IPQ7Z5R6 666 aaPredicted RBP16.38■□□□□ 0.21
LRFN1-201ENST00000248668 OSTM1Q86WC4 334 aa16.38■□□□□ 0.21
LRFN1-201ENST00000248668 ADGRF2Q8IZF7 708 aa16.38■□□□□ 0.21
LRFN1-201ENST00000248668 LRRC52Q8N7C0 313 aa16.38■□□□□ 0.21
LRFN1-201ENST00000248668 CCDC63Q8NA47 563 aa16.38■□□□□ 0.21
LRFN1-201ENST00000248668 MYADML2A6NDP7 307 aa16.37■□□□□ 0.21
LRFN1-201ENST00000248668 SUN1O94901 812 aa16.37■□□□□ 0.21
LRFN1-201ENST00000248668 ZNF865P0CJ78 1059 aaPredicted RBP16.37■□□□□ 0.21
LRFN1-201ENST00000248668 AMPD1P23109 780 aa16.37■□□□□ 0.21
LRFN1-201ENST00000248668 BST2Q10589 180 aaKnown RBP16.37■□□□□ 0.21
LRFN1-201ENST00000248668 SLC10A2Q12908 348 aaPredicted RBP16.37■□□□□ 0.21
LRFN1-201ENST00000248668 ITIH4Q14624 930 aa16.37■□□□□ 0.21
LRFN1-201ENST00000248668 FAM47CQ5HY64 1035 aa16.37■□□□□ 0.21
LRFN1-201ENST00000248668 EFHC2Q5JST6 749 aa16.37■□□□□ 0.21
LRFN1-201ENST00000248668 HHATQ5VTY9 493 aa16.37■□□□□ 0.21
LRFN1-201ENST00000248668 LVRNQ6Q4G3 990 aa16.37■□□□□ 0.21
LRFN1-201ENST00000248668 ALKAL1Q6UXT8 129 aa16.37■□□□□ 0.21
LRFN1-201ENST00000248668 RIBC1Q8N443 379 aaPredicted RBP16.37■□□□□ 0.21
LRFN1-201ENST00000248668 AP4E1Q9UPM8 1137 aa16.37■□□□□ 0.21
LRFN1-201ENST00000248668 HTTP42858 3142 aa16.37■□□□□ 0.21
LRFN1-201ENST00000248668 ASMTLO95671 621 aa16.37■□□□□ 0.21
LRFN1-201ENST00000248668 ADRA1DP25100 572 aa16.37■□□□□ 0.21
LRFN1-201ENST00000248668 DCAF6Q58WW2 860 aa16.37■□□□□ 0.21
LRFN1-201ENST00000248668 UBXN11Q5T124 520 aa16.37■□□□□ 0.21
LRFN1-201ENST00000248668 TBC1D1Q86TI0 1168 aaPredicted RBP16.37■□□□□ 0.21
LRFN1-201ENST00000248668 PRPF39Q86UA1 669 aaKnown RBP16.37■□□□□ 0.21
LRFN1-201ENST00000248668 TTC39CQ8N584 583 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms