RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 CXorf49A8MYA2 514 aaPredicted RBP13.09□□□□□ -0.31
RAB3IP-201ENST00000247833 C2CD2LO14523 706 aa13.09□□□□□ -0.31
RAB3IP-201ENST00000247833 FCHO1O14526 889 aa13.09□□□□□ -0.31
RAB3IP-201ENST00000247833 CIB2O75838 187 aa13.09□□□□□ -0.31
RAB3IP-201ENST00000247833 TOP3BO95985 862 aaKnown RBP13.09□□□□□ -0.31
RAB3IP-201ENST00000247833 IQCF3P0C7M6 154 aa13.09□□□□□ -0.31
RAB3IP-201ENST00000247833 CCNB1P14635 433 aa13.09□□□□□ -0.31
RAB3IP-201ENST00000247833 GPD2P43304 727 aa13.09□□□□□ -0.31
RAB3IP-201ENST00000247833 IREB2P48200 963 aaKnown RBP13.09□□□□□ -0.31
RAB3IP-201ENST00000247833 RASA2Q15283 850 aa13.09□□□□□ -0.31
RAB3IP-201ENST00000247833 CES3Q6UWW8 571 aa13.09□□□□□ -0.31
RAB3IP-201ENST00000247833 BANPQ8N9N5 519 aa13.09□□□□□ -0.31
RAB3IP-201ENST00000247833 FBXO41Q8TF61 875 aa13.09□□□□□ -0.31
RAB3IP-201ENST00000247833 STK32AQ8WU08 396 aa13.09□□□□□ -0.31
RAB3IP-201ENST00000247833 TTC1Q99614 292 aa13.09□□□□□ -0.31
RAB3IP-201ENST00000247833 MAGEB5Q9BZ81 275 aa13.09□□□□□ -0.31
RAB3IP-201ENST00000247833 ADAMTS5Q9UNA0 930 aa13.09□□□□□ -0.31
RAB3IP-201ENST00000247833 TNFSF13BQ9Y275 285 aa13.09□□□□□ -0.31
RAB3IP-201ENST00000247833 GAS2O43903 313 aaKnown RBP13.09□□□□□ -0.31
RAB3IP-201ENST00000247833 CALB2P22676 271 aa13.09□□□□□ -0.31
RAB3IP-201ENST00000247833 CYP2F1P24903 491 aa13.09□□□□□ -0.31
RAB3IP-201ENST00000247833 ARL4AP40617 200 aa13.09□□□□□ -0.31
RAB3IP-201ENST00000247833 KPNB1Q14974 876 aaKnown RBP13.09□□□□□ -0.31
RAB3IP-201ENST00000247833 NOMO1Q15155 1222 aa13.09□□□□□ -0.31
RAB3IP-201ENST00000247833 BOLA3Q53S33 107 aa13.09□□□□□ -0.31
RAB3IP-201ENST00000247833 PMF1Q6P1K2 205 aa13.09□□□□□ -0.31
RAB3IP-201ENST00000247833 ASRGL1Q7L266 308 aa13.09□□□□□ -0.31
RAB3IP-201ENST00000247833 MIEF2Q96C03 454 aa13.09□□□□□ -0.31
RAB3IP-201ENST00000247833 ZNF570Q96NI8 536 aa13.09□□□□□ -0.31
RAB3IP-201ENST00000247833 VPS11Q9H270 941 aa13.09□□□□□ -0.31
RAB3IP-201ENST00000247833 HCRTO43612 131 aa13.08□□□□□ -0.32
RAB3IP-201ENST00000247833 SKIV2L2P42285 1042 aaKnown RBP13.08□□□□□ -0.32
RAB3IP-201ENST00000247833 AQP5P55064 265 aa13.08□□□□□ -0.32
RAB3IP-201ENST00000247833 GBE1Q04446 702 aa13.08□□□□□ -0.32
RAB3IP-201ENST00000247833 MBTD1Q05BQ5 628 aa13.08□□□□□ -0.32
RAB3IP-201ENST00000247833 NME3Q13232 169 aa13.08□□□□□ -0.32
RAB3IP-201ENST00000247833 THOC5Q13769 683 aaKnown RBP13.08□□□□□ -0.32
RAB3IP-201ENST00000247833 ATG16L1Q676U5 607 aa13.08□□□□□ -0.32
RAB3IP-201ENST00000247833 CAPRIN2Q6IMN6 1127 aaKnown RBP13.08□□□□□ -0.32
RAB3IP-201ENST00000247833 TRMT10BQ6PF06 316 aaKnown RBP13.08□□□□□ -0.32
RAB3IP-201ENST00000247833 BZW1Q7L1Q6 419 aaKnown RBP13.08□□□□□ -0.32
RAB3IP-201ENST00000247833 PLD5Q8N7P1 536 aa13.08□□□□□ -0.32
RAB3IP-201ENST00000247833 THTPAQ9BU02 230 aa13.08□□□□□ -0.32
RAB3IP-201ENST00000247833 EBF2Q9HAK2 575 aa13.08□□□□□ -0.32
RAB3IP-201ENST00000247833 TXNRD2Q9NNW7 524 aa13.08□□□□□ -0.32
RAB3IP-201ENST00000247833 IL1RAPL1Q9NZN1 696 aa13.08□□□□□ -0.32
RAB3IP-201ENST00000247833 ZNF112Q9UJU3 913 aa13.08□□□□□ -0.32
RAB3IP-201ENST00000247833 PCNTO95613 3336 aa13.08□□□□□ -0.32
RAB3IP-201ENST00000247833 C3orf70A6NLC5 250 aaPredicted RBP13.08□□□□□ -0.32
RAB3IP-201ENST00000247833 CAPN9O14815 690 aa13.08□□□□□ -0.32
RAB3IP-201ENST00000247833 GRIA1P42261 906 aa13.08□□□□□ -0.32
RAB3IP-201ENST00000247833 BST1Q10588 318 aa13.08□□□□□ -0.32
RAB3IP-201ENST00000247833 SLC10A6Q3KNW5 377 aa13.08□□□□□ -0.32
RAB3IP-201ENST00000247833 DSTYKQ6XUX3 929 aa13.08□□□□□ -0.32
RAB3IP-201ENST00000247833 ARHGAP24Q8N264 748 aa13.08□□□□□ -0.32
RAB3IP-201ENST00000247833 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.08□□□□□ -0.32
RAB3IP-201ENST00000247833 SLC44A1Q8WWI5 657 aa13.08□□□□□ -0.32
RAB3IP-201ENST00000247833 ETNK2Q9NVF9 386 aa13.08□□□□□ -0.32
RAB3IP-201ENST00000247833 SNTG2Q9NY99 539 aa13.08□□□□□ -0.32
RAB3IP-201ENST00000247833 GPRC5DQ9NZD1 345 aa13.08□□□□□ -0.32
RAB3IP-201ENST00000247833 SLC17A6Q9P2U8 582 aa13.08□□□□□ -0.32
RAB3IP-201ENST00000247833 MTO1Q9Y2Z2 717 aaKnown RBP13.08□□□□□ -0.32
RAB3IP-201ENST00000247833 TCRBV5S1A1TA0A578 114 aa13.08□□□□□ -0.32
RAB3IP-201ENST00000247833 AMPD1P23109 780 aa13.08□□□□□ -0.32
RAB3IP-201ENST00000247833 YWHAZP63104 245 aaKnown RBP13.08□□□□□ -0.32
RAB3IP-201ENST00000247833 SARNPP82979 210 aaKnown RBP13.08□□□□□ -0.32
RAB3IP-201ENST00000247833 CCDC15Q0P6D6 951 aa13.08□□□□□ -0.32
RAB3IP-201ENST00000247833 KCNT2Q6UVM3 1135 aa13.08□□□□□ -0.32
RAB3IP-201ENST00000247833 SLC25A41Q8N5S1 370 aa13.08□□□□□ -0.32
RAB3IP-201ENST00000247833 UBR7Q8N806 425 aa13.08□□□□□ -0.32
RAB3IP-201ENST00000247833 CMASQ8NFW8 434 aaPredicted RBP13.08□□□□□ -0.32
RAB3IP-201ENST00000247833 CCDC124Q96CT7 223 aaKnown RBP13.08□□□□□ -0.32
RAB3IP-201ENST00000247833 FERMT1Q9BQL6 677 aa13.08□□□□□ -0.32
RAB3IP-201ENST00000247833 WDR83Q9BRX9 315 aaKnown RBP13.08□□□□□ -0.32
RAB3IP-201ENST00000247833 NMUR2Q9GZQ4 415 aa13.08□□□□□ -0.32
RAB3IP-201ENST00000247833 FZD8Q9H461 694 aa13.08□□□□□ -0.32
RAB3IP-201ENST00000247833 CYP4F11Q9HBI6 524 aa13.08□□□□□ -0.32
RAB3IP-201ENST00000247833 STOML1Q9UBI4 398 aa13.08□□□□□ -0.32
RAB3IP-201ENST00000247833 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.07□□□□□ -0.32
RAB3IP-201ENST00000247833 KRT36O76013 467 aa13.07□□□□□ -0.32
RAB3IP-201ENST00000247833 CYP2C8P10632 490 aa13.07□□□□□ -0.32
RAB3IP-201ENST00000247833 CCDC130P13994 396 aa13.07□□□□□ -0.32
RAB3IP-201ENST00000247833 EPHB1P54762 984 aa13.07□□□□□ -0.32
RAB3IP-201ENST00000247833 RPL10AP62906 217 aaKnown RBP13.07□□□□□ -0.32
RAB3IP-201ENST00000247833 CFAP157Q5JU67 520 aa13.07□□□□□ -0.32
RAB3IP-201ENST00000247833 UNC5BQ8IZJ1 945 aa13.07□□□□□ -0.32
RAB3IP-201ENST00000247833 FNIP1Q8TF40 1166 aa13.07□□□□□ -0.32
RAB3IP-201ENST00000247833 INPP5DQ92835 1189 aa13.07□□□□□ -0.32
RAB3IP-201ENST00000247833 MRPL45Q9BRJ2 306 aaKnown RBP13.07□□□□□ -0.32
RAB3IP-201ENST00000247833 FRMD8P1Q9BZ68 369 aaPredicted RBP13.07□□□□□ -0.32
RAB3IP-201ENST00000247833 SNX25Q9H3E2 840 aa13.07□□□□□ -0.32
RAB3IP-201ENST00000247833 IGKV6D-21A0A0A0MT36 114 aa13.07□□□□□ -0.32
RAB3IP-201ENST00000247833 LUC7L3O95232 432 aaKnown RBP13.07□□□□□ -0.32
RAB3IP-201ENST00000247833 MYCNP04198 464 aaPredicted RBP13.07□□□□□ -0.32
RAB3IP-201ENST00000247833 ALADP13716 330 aa13.07□□□□□ -0.32
RAB3IP-201ENST00000247833 NCF2P19878 526 aaPredicted RBP13.07□□□□□ -0.32
RAB3IP-201ENST00000247833 AKAP5P24588 427 aa13.07□□□□□ -0.32
RAB3IP-201ENST00000247833 PTDSS1P48651 473 aaKnown RBP13.07□□□□□ -0.32
RAB3IP-201ENST00000247833 CDK16Q00536 496 aa13.07□□□□□ -0.32
RAB3IP-201ENST00000247833 CDHR3Q6ZTQ4 885 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms