RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 MAFO75444 373 aaPredicted RBP12.43□□□□□ -0.42
SEC61A1-201ENST00000243253 CYP3A5P20815 502 aa12.43□□□□□ -0.42
SEC61A1-201ENST00000243253 PSMA2P25787 234 aa12.43□□□□□ -0.42
SEC61A1-201ENST00000243253 CRABP2P29373 138 aa12.43□□□□□ -0.42
SEC61A1-201ENST00000243253 RFC5P40937 340 aa12.43□□□□□ -0.42
SEC61A1-201ENST00000243253 CETN2P41208 172 aa12.43□□□□□ -0.42
SEC61A1-201ENST00000243253 GPD2P43304 727 aa12.43□□□□□ -0.42
SEC61A1-201ENST00000243253 PQLC3Q8N755 202 aa12.43□□□□□ -0.42
SEC61A1-201ENST00000243253 C7orf31Q8N865 590 aa12.43□□□□□ -0.42
SEC61A1-201ENST00000243253 UBA3Q8TBC4 463 aa12.43□□□□□ -0.42
SEC61A1-201ENST00000243253 ZFAND2BQ8WV99 257 aa12.43□□□□□ -0.42
SEC61A1-201ENST00000243253 PIWIL1Q96J94 861 aaKnown RBP12.43□□□□□ -0.42
SEC61A1-201ENST00000243253 TANC1Q9C0D5 1861 aa12.43□□□□□ -0.42
SEC61A1-201ENST00000243253 ENO4A6NNW6 628 aa12.43□□□□□ -0.42
SEC61A1-201ENST00000243253 PFKMP08237 780 aa12.43□□□□□ -0.42
SEC61A1-201ENST00000243253 STIP1P31948 543 aaKnown RBP12.43□□□□□ -0.42
SEC61A1-201ENST00000243253 ACTR3P61158 418 aa12.43□□□□□ -0.42
SEC61A1-201ENST00000243253 HNRNPDQ14103 355 aaKnown RBP12.43□□□□□ -0.42
SEC61A1-201ENST00000243253 RABGAP1LQ5R372 815 aa12.43□□□□□ -0.42
SEC61A1-201ENST00000243253 ADGRF2Q8IZF7 708 aa12.43□□□□□ -0.42
SEC61A1-201ENST00000243253 GTF2IRD1Q9UHL9 959 aa12.43□□□□□ -0.42
SEC61A1-201ENST00000243253 HEY1Q9Y5J3 304 aa12.43□□□□□ -0.42
SEC61A1-201ENST00000243253 NR2E3Q9Y5X4 410 aa12.43□□□□□ -0.42
SEC61A1-201ENST00000243253 SLC15A5A6NIM6 579 aa12.42□□□□□ -0.42
SEC61A1-201ENST00000243253 SDR42E2A6NKP2 422 aa12.42□□□□□ -0.42
SEC61A1-201ENST00000243253 CYB561D2O14569 222 aa12.42□□□□□ -0.42
SEC61A1-201ENST00000243253 GYG2O15488 501 aa12.42□□□□□ -0.42
SEC61A1-201ENST00000243253 TM7SF2O76062 418 aa12.42□□□□□ -0.42
SEC61A1-201ENST00000243253 PCK1P35558 622 aa12.42□□□□□ -0.42
SEC61A1-201ENST00000243253 BST1Q10588 318 aa12.42□□□□□ -0.42
SEC61A1-201ENST00000243253 ACAP1Q15027 740 aa12.42□□□□□ -0.42
SEC61A1-201ENST00000243253 MAVSQ7Z434 540 aa12.42□□□□□ -0.42
SEC61A1-201ENST00000243253 GALNT15Q8N3T1 639 aa12.42□□□□□ -0.42
SEC61A1-201ENST00000243253 KHSRPQ92945 711 aaKnown RBP eCLIP12.42□□□□□ -0.423e-12■■□□□ 11.7
SEC61A1-201ENST00000243253 MAF1Q9H063 256 aa12.42□□□□□ -0.42
SEC61A1-201ENST00000243253 ZNF302Q9NR11 478 aa12.42□□□□□ -0.42
SEC61A1-201ENST00000243253 DNAJB4Q9UDY4 337 aa12.42□□□□□ -0.42
SEC61A1-201ENST00000243253 EMCNQ9ULC0 261 aa12.42□□□□□ -0.42
SEC61A1-201ENST00000243253 OTOFQ9HC10 1997 aa12.42□□□□□ -0.42
SEC61A1-201ENST00000243253 A0A088AWK7 358 aa12.42□□□□□ -0.42
SEC61A1-201ENST00000243253 IQANK1A0A1B0GTG1 560 aa12.42□□□□□ -0.42
SEC61A1-201ENST00000243253 B4GALT4O60513 344 aa12.42□□□□□ -0.42
SEC61A1-201ENST00000243253 TOM1L1O75674 476 aa12.42□□□□□ -0.42
SEC61A1-201ENST00000243253 ARRB2P32121 409 aa12.42□□□□□ -0.42
SEC61A1-201ENST00000243253 BACE1P56817 501 aa12.42□□□□□ -0.42
SEC61A1-201ENST00000243253 EIF3EP60228 445 aaKnown RBP12.42□□□□□ -0.42
SEC61A1-201ENST00000243253 NET1Q7Z628 596 aaPredicted RBP12.42□□□□□ -0.42
SEC61A1-201ENST00000243253 SLC26A11Q86WA9 606 aa12.42□□□□□ -0.42
SEC61A1-201ENST00000243253 PDIK1LQ8N165 341 aa12.42□□□□□ -0.42
SEC61A1-201ENST00000243253 NCSTNQ92542 709 aa12.42□□□□□ -0.42
SEC61A1-201ENST00000243253 GPATCH2LQ9NWQ4 482 aa12.42□□□□□ -0.42
SEC61A1-201ENST00000243253 SLC7A8Q9UHI5 535 aa12.42□□□□□ -0.42
SEC61A1-201ENST00000243253 USP18Q9UMW8 372 aa12.42□□□□□ -0.42
SEC61A1-201ENST00000243253 FAM159BA6NKW6 160 aa12.42□□□□□ -0.42
SEC61A1-201ENST00000243253 ZNF195O14628 629 aa12.42□□□□□ -0.42
SEC61A1-201ENST00000243253 B4GALT5O43286 388 aa12.42□□□□□ -0.42
SEC61A1-201ENST00000243253 FARP2O94887 1054 aaPredicted RBP12.42□□□□□ -0.42
SEC61A1-201ENST00000243253 CSH1P0DML2 217 aa12.42□□□□□ -0.42
SEC61A1-201ENST00000243253 CSH2P0DML3 217 aa12.42□□□□□ -0.42
SEC61A1-201ENST00000243253 RBP3P10745 1247 aa12.42□□□□□ -0.42
SEC61A1-201ENST00000243253 PEX19P40855 299 aa12.42□□□□□ -0.42
SEC61A1-201ENST00000243253 YWHAEP62258 255 aaKnown RBP12.42□□□□□ -0.42
SEC61A1-201ENST00000243253 PPP6R3Q5H9R7 873 aaPredicted RBP12.42□□□□□ -0.42
SEC61A1-201ENST00000243253 MDH1BQ5I0G3 518 aa12.42□□□□□ -0.42
SEC61A1-201ENST00000243253 TMPRSS6Q8IU80 811 aa12.42□□□□□ -0.42
SEC61A1-201ENST00000243253 OR6Y1Q8NGX8 325 aa12.42□□□□□ -0.42
SEC61A1-201ENST00000243253 SPATA18Q8TC71 538 aa12.42□□□□□ -0.42
SEC61A1-201ENST00000243253 FAF2Q96CS3 445 aa12.42□□□□□ -0.42
SEC61A1-201ENST00000243253 TRIM56Q9BRZ2 755 aaKnown RBP12.42□□□□□ -0.42
SEC61A1-201ENST00000243253 AFG3L2Q9Y4W6 797 aa12.42□□□□□ -0.42
SEC61A1-201ENST00000243253 CCDC78A2IDD5 438 aa12.41□□□□□ -0.42
SEC61A1-201ENST00000243253 CLGNO14967 610 aa12.41□□□□□ -0.42
SEC61A1-201ENST00000243253 MT-ND3P03897 115 aa12.41□□□□□ -0.42
SEC61A1-201ENST00000243253 IQCF3P0C7M6 154 aa12.41□□□□□ -0.42
SEC61A1-201ENST00000243253 EML3Q32P44 896 aa12.41□□□□□ -0.42
SEC61A1-201ENST00000243253 DALRD3Q5D0E6 543 aaKnown RBP12.41□□□□□ -0.42
SEC61A1-201ENST00000243253 TTC39BQ5VTQ0 682 aaPredicted RBP12.41□□□□□ -0.42
SEC61A1-201ENST00000243253 CWF19L1Q69YN2 538 aaKnown RBP12.41□□□□□ -0.42
SEC61A1-201ENST00000243253 SLC9A4Q6AI14 798 aa12.41□□□□□ -0.42
SEC61A1-201ENST00000243253 KYAT3Q6YP21 454 aaKnown RBP12.41□□□□□ -0.42
SEC61A1-201ENST00000243253 PALM2Q8IXS6 379 aa12.41□□□□□ -0.42
SEC61A1-201ENST00000243253 TMEM192Q8IY95 271 aa12.41□□□□□ -0.42
SEC61A1-201ENST00000243253 RAB3IL1Q8TBN0 382 aa12.41□□□□□ -0.42
SEC61A1-201ENST00000243253 USP6NLQ92738 828 aa12.41□□□□□ -0.42
SEC61A1-201ENST00000243253 SIGLEC10Q96LC7 697 aa12.41□□□□□ -0.42
SEC61A1-201ENST00000243253 ASCC2Q9H1I8 757 aaPredicted RBP12.41□□□□□ -0.42
SEC61A1-201ENST00000243253 PIM2Q9P1W9 311 aa12.41□□□□□ -0.42
SEC61A1-201ENST00000243253 C2CD4BA6NLJ0 364 aa12.41□□□□□ -0.42
SEC61A1-201ENST00000243253 SPAG6O75602 509 aa12.41□□□□□ -0.42
SEC61A1-201ENST00000243253 ZNF280AP59817 542 aaPredicted RBP12.41□□□□□ -0.42
SEC61A1-201ENST00000243253 GLRA4Q5JXX5 417 aa12.41□□□□□ -0.42
SEC61A1-201ENST00000243253 TSHZ1Q6ZSZ6 1077 aa12.41□□□□□ -0.42
SEC61A1-201ENST00000243253 RTKN2Q8IZC4 609 aa12.41□□□□□ -0.42
SEC61A1-201ENST00000243253 PRPF31Q8WWY3 499 aaKnown RBP12.41□□□□□ -0.42
SEC61A1-201ENST00000243253 CDHR1Q96JP9 859 aa12.41□□□□□ -0.42
SEC61A1-201ENST00000243253 CLPTM1LQ96KA5 538 aa12.41□□□□□ -0.42
SEC61A1-201ENST00000243253 ZNF184Q99676 751 aaPredicted RBP12.41□□□□□ -0.42
SEC61A1-201ENST00000243253 ELOVL4Q9GZR5 314 aa12.41□□□□□ -0.42
SEC61A1-201ENST00000243253 FAM49AQ9H0Q0 323 aaPredicted RBP12.41□□□□□ -0.42
SEC61A1-201ENST00000243253 ELP3Q9H9T3 547 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms