RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 MYBPHLA2RUH7 354 aa19.25■□□□□ 0.67
HOXC11-201ENST00000243082 SRRM3A6NNA2 597 aaPredicted RBP19.25■□□□□ 0.67
HOXC11-201ENST00000243082 ALOX15BO15296 676 aa19.25■□□□□ 0.67
HOXC11-201ENST00000243082 ABHD2P08910 425 aa19.25■□□□□ 0.67
HOXC11-201ENST00000243082 ACLYP53396 1101 aa19.25■□□□□ 0.67
HOXC11-201ENST00000243082 MAP3K7CLP57077 242 aa19.25■□□□□ 0.67
HOXC11-201ENST00000243082 GAD2Q05329 585 aa19.25■□□□□ 0.67
HOXC11-201ENST00000243082 TIGD5Q53EQ6 642 aa19.25■□□□□ 0.67
HOXC11-201ENST00000243082 PPP6R3Q5H9R7 873 aaPredicted RBP19.25■□□□□ 0.67
HOXC11-201ENST00000243082 CCDC185Q8N715 623 aa19.25■□□□□ 0.67
HOXC11-201ENST00000243082 STMN4Q9H169 189 aaPredicted RBP19.25■□□□□ 0.67
HOXC11-201ENST00000243082 USP29Q9HBJ7 922 aa19.25■□□□□ 0.67
HOXC11-201ENST00000243082 DAB1O75553 588 aa19.25■□□□□ 0.67
HOXC11-201ENST00000243082 POMCP01189 267 aa19.25■□□□□ 0.67
HOXC11-201ENST00000243082 FAM200BP0CF97 657 aa19.25■□□□□ 0.67
HOXC11-201ENST00000243082 BCAR1P56945 870 aa19.25■□□□□ 0.67
HOXC11-201ENST00000243082 SLC25A52Q3SY17 297 aa19.25■□□□□ 0.67
HOXC11-201ENST00000243082 RNF180Q86T96 592 aa19.25■□□□□ 0.67
HOXC11-201ENST00000243082 EXOC3L1Q86VI1 746 aa19.25■□□□□ 0.67
HOXC11-201ENST00000243082 FAM149B1Q96BN6 582 aa19.25■□□□□ 0.67
HOXC11-201ENST00000243082 PCED1BQ96HM7 432 aa19.25■□□□□ 0.67
HOXC11-201ENST00000243082 CAPNS2Q96L46 248 aa19.25■□□□□ 0.67
HOXC11-201ENST00000243082 KRT82Q9NSB4 513 aa19.25■□□□□ 0.67
HOXC11-201ENST00000243082 AP4E1Q9UPM8 1137 aa19.25■□□□□ 0.67
HOXC11-201ENST00000243082 NOD1Q9Y239 953 aa19.25■□□□□ 0.67
HOXC11-201ENST00000243082 GOLGA8MH3BSY2 632 aa19.24■□□□□ 0.67
HOXC11-201ENST00000243082 H7C0C1 242 aa19.24■□□□□ 0.67
HOXC11-201ENST00000243082 CABYRO75952 493 aa19.24■□□□□ 0.67
HOXC11-201ENST00000243082 CYP2F1P24903 491 aa19.24■□□□□ 0.67
HOXC11-201ENST00000243082 ATP5OP48047 213 aa19.24■□□□□ 0.67
HOXC11-201ENST00000243082 SEC24CP53992 1094 aa19.24■□□□□ 0.67
HOXC11-201ENST00000243082 YWHAZP63104 245 aaKnown RBP19.24■□□□□ 0.67
HOXC11-201ENST00000243082 STAT4Q14765 748 aa19.24■□□□□ 0.67
HOXC11-201ENST00000243082 OTUD1Q5VV17 481 aaPredicted RBP19.24■□□□□ 0.67
HOXC11-201ENST00000243082 CD300LGQ6UXG3 332 aa19.24■□□□□ 0.67
HOXC11-201ENST00000243082 CD99L2Q8TCZ2 262 aa19.24■□□□□ 0.67
HOXC11-201ENST00000243082 NT5C3BQ969T7 300 aa19.24■□□□□ 0.67
HOXC11-201ENST00000243082 TTC25Q96NG3 672 aa19.24■□□□□ 0.67
HOXC11-201ENST00000243082 KCTD15Q96SI1 283 aaPredicted RBP19.24■□□□□ 0.67
HOXC11-201ENST00000243082 SMOQ99835 787 aa19.24■□□□□ 0.67
HOXC11-201ENST00000243082 DHX35Q9H5Z1 703 aaKnown RBP19.24■□□□□ 0.67
HOXC11-201ENST00000243082 NRDE2Q9H7Z3 1164 aa19.24■□□□□ 0.67
HOXC11-201ENST00000243082 LRRC4Q9HBW1 653 aa19.24■□□□□ 0.67
HOXC11-201ENST00000243082 CWC15Q9P013 229 aaKnown RBP19.24■□□□□ 0.67
HOXC11-201ENST00000243082 CTNNAL1Q9UBT7 734 aa19.24■□□□□ 0.67
HOXC11-201ENST00000243082 CDH9Q9ULB4 789 aa19.24■□□□□ 0.67
HOXC11-201ENST00000243082 HEY1Q9Y5J3 304 aa19.24■□□□□ 0.67
HOXC11-201ENST00000243082 BRCA2P51587 3418 aa19.24■□□□□ 0.67
HOXC11-201ENST00000243082 TCRBV7S3A2A0A539 114 aa19.24■□□□□ 0.67
HOXC11-201ENST00000243082 IBSPP21815 317 aaPredicted RBP19.24■□□□□ 0.67
HOXC11-201ENST00000243082 TKTL1P51854 596 aa19.24■□□□□ 0.67
HOXC11-201ENST00000243082 RABGGTBP53611 331 aa19.24■□□□□ 0.67
HOXC11-201ENST00000243082 PITX1P78337 314 aaPredicted RBP19.24■□□□□ 0.67
HOXC11-201ENST00000243082 CCDC38Q502W7 563 aa19.24■□□□□ 0.67
HOXC11-201ENST00000243082 HP1BP3Q5SSJ5 553 aaPredicted RBP19.24■□□□□ 0.67
HOXC11-201ENST00000243082 CENPUQ71F23 418 aa19.24■□□□□ 0.67
HOXC11-201ENST00000243082 BNIPLQ7Z465 357 aa19.24■□□□□ 0.67
HOXC11-201ENST00000243082 FAM35AQ86V20 835 aa19.24■□□□□ 0.67
HOXC11-201ENST00000243082 TAB3Q8N5C8 712 aaPredicted RBP19.24■□□□□ 0.67
HOXC11-201ENST00000243082 ZMIZ2Q8NF64 920 aa19.24■□□□□ 0.67
HOXC11-201ENST00000243082 RTP3Q9BQQ7 232 aa19.24■□□□□ 0.67
HOXC11-201ENST00000243082 TMEM30AQ9NV96 361 aa19.24■□□□□ 0.67
HOXC11-201ENST00000243082 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.24■□□□□ 0.67
HOXC11-201ENST00000243082 I3L4J1 428 aa19.23■□□□□ 0.67
HOXC11-201ENST00000243082 AP1G2O75843 785 aa19.23■□□□□ 0.67
HOXC11-201ENST00000243082 NOS2P35228 1153 aa19.23■□□□□ 0.67
HOXC11-201ENST00000243082 SULT1E1P49888 294 aa19.23■□□□□ 0.67
HOXC11-201ENST00000243082 CACNA2D1P54289 1103 aa19.23■□□□□ 0.67
HOXC11-201ENST00000243082 PDIA2Q13087 525 aaKnown RBP19.23■□□□□ 0.67
HOXC11-201ENST00000243082 HIF1AQ16665 826 aa19.23■□□□□ 0.67
HOXC11-201ENST00000243082 DEFB115Q30KQ5 88 aa19.23■□□□□ 0.67
HOXC11-201ENST00000243082 DCAF6Q58WW2 860 aa19.23■□□□□ 0.67
HOXC11-201ENST00000243082 ZBED8Q8IZ13 594 aa19.23■□□□□ 0.67
HOXC11-201ENST00000243082 MYCBPAPQ8TBZ2 947 aa19.23■□□□□ 0.67
HOXC11-201ENST00000243082 CENPTQ96BT3 561 aa19.23■□□□□ 0.67
HOXC11-201ENST00000243082 PGBD4Q96DM1 585 aa19.23■□□□□ 0.67
HOXC11-201ENST00000243082 RTP4Q96DX8 246 aa19.23■□□□□ 0.67
HOXC11-201ENST00000243082 SLC2A13Q96QE2 648 aa19.23■□□□□ 0.67
HOXC11-201ENST00000243082 KCNK16Q96T55 309 aa19.23■□□□□ 0.67
HOXC11-201ENST00000243082 NPY6RQ99463 290 aa19.23■□□□□ 0.67
HOXC11-201ENST00000243082 PHACTR1Q9C0D0 580 aa19.23■□□□□ 0.67
HOXC11-201ENST00000243082 PPANQ9NQ55 473 aaKnown RBP19.23■□□□□ 0.67
HOXC11-201ENST00000243082 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.22■□□□□ 0.67
HOXC11-201ENST00000243082 A0A087WUV0 522 aaPredicted RBP19.22■□□□□ 0.67
HOXC11-201ENST00000243082 TRAPPC3O43617 180 aa19.22■□□□□ 0.67
HOXC11-201ENST00000243082 TMEM63AO94886 807 aa19.22■□□□□ 0.67
HOXC11-201ENST00000243082 CHN1P15882 459 aa19.22■□□□□ 0.67
HOXC11-201ENST00000243082 FNBP1LQ5T0N5 605 aa19.22■□□□□ 0.67
HOXC11-201ENST00000243082 HFE2Q6ZVN8 426 aa19.22■□□□□ 0.67
HOXC11-201ENST00000243082 ZNF598Q86UK7 904 aaKnown RBP19.22■□□□□ 0.67
HOXC11-201ENST00000243082 FAM131BQ86XD5 332 aa19.22■□□□□ 0.67
HOXC11-201ENST00000243082 REM2Q8IYK8 340 aaPredicted RBP19.22■□□□□ 0.67
HOXC11-201ENST00000243082 SIX6OS1Q8N1H7 587 aa19.22■□□□□ 0.67
HOXC11-201ENST00000243082 SELENOSQ9BQE4 189 aa19.22■□□□□ 0.67
HOXC11-201ENST00000243082 CCDC77Q9BR77 488 aa19.22■□□□□ 0.67
HOXC11-201ENST00000243082 CFHR5Q9BXR6 569 aa19.22■□□□□ 0.67
HOXC11-201ENST00000243082 EURLQ9NYK6 297 aa19.22■□□□□ 0.67
HOXC11-201ENST00000243082 RSPH14Q9UHP6 348 aa19.22■□□□□ 0.67
HOXC11-201ENST00000243082 LGALS13Q9UHV8 139 aa19.22■□□□□ 0.67
HOXC11-201ENST00000243082 FZD10Q9ULW2 581 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms