RNA–Protein interactions for RNA: ENST00000238682.7

TGFB3-201, Transcript of transforming growth factor beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB3, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-201ENST00000238682 GLUD2P49448 558 aa9.78□□□□□ -0.84
TGFB3-201ENST00000238682 ERVFC1P60507 584 aa9.78□□□□□ -0.84
TGFB3-201ENST00000238682 DAB2P98082 770 aa9.78□□□□□ -0.84
TGFB3-201ENST00000238682 DSG1Q02413 1049 aa9.78□□□□□ -0.84
TGFB3-201ENST00000238682 SOX4Q06945 474 aaPredicted RBP9.78□□□□□ -0.84
TGFB3-201ENST00000238682 ARHGAP44Q17R89 818 aa9.78□□□□□ -0.84
TGFB3-201ENST00000238682 ARHGAP29Q52LW3 1261 aa9.78□□□□□ -0.84
TGFB3-201ENST00000238682 SGO2Q562F6 1265 aa9.78□□□□□ -0.84
TGFB3-201ENST00000238682 LCLAT1Q6UWP7 414 aa9.78□□□□□ -0.84
TGFB3-201ENST00000238682 TRIM67Q6ZTA4 783 aa9.78□□□□□ -0.84
TGFB3-201ENST00000238682 PHF13Q86YI8 300 aaPredicted RBP9.78□□□□□ -0.84
TGFB3-201ENST00000238682 APLFQ8IW19 511 aaPredicted RBP9.78□□□□□ -0.84
TGFB3-201ENST00000238682 ADGRF2Q8IZF7 708 aa9.78□□□□□ -0.84
TGFB3-201ENST00000238682 TMEM35BQ8NCS4 154 aa9.78□□□□□ -0.84
TGFB3-201ENST00000238682 VPS37AQ8NEZ2 397 aa9.78□□□□□ -0.84
TGFB3-201ENST00000238682 MAGEC3Q8TD91 643 aa9.78□□□□□ -0.84
TGFB3-201ENST00000238682 DDX1Q92499 740 aaKnown RBP9.78□□□□□ -0.84
TGFB3-201ENST00000238682 E2F7Q96AV8 911 aa9.78□□□□□ -0.84
TGFB3-201ENST00000238682 ACSF2Q96CM8 615 aaPredicted RBP9.78□□□□□ -0.84
TGFB3-201ENST00000238682 SENP8Q96LD8 212 aa9.78□□□□□ -0.84
TGFB3-201ENST00000238682 ZFP42Q96MM3 310 aa9.78□□□□□ -0.84
TGFB3-201ENST00000238682 NECAB3Q96P71 396 aaPredicted RBP9.78□□□□□ -0.84
TGFB3-201ENST00000238682 IGFLR1Q9H665 355 aa9.78□□□□□ -0.84
TGFB3-201ENST00000238682 MIOSQ9NXC5 875 aa9.78□□□□□ -0.84
TGFB3-201ENST00000238682 IGSF9Q9P2J2 1179 aa9.78□□□□□ -0.84
TGFB3-201ENST00000238682 NCANO14594 1321 aa9.78□□□□□ -0.84
TGFB3-201ENST00000238682 TMEM221A6NGB7 291 aa9.78□□□□□ -0.84
TGFB3-201ENST00000238682 M0R296 226 aa9.78□□□□□ -0.84
TGFB3-201ENST00000238682 CYB561D2O14569 222 aa9.78□□□□□ -0.84
TGFB3-201ENST00000238682 MTA2O94776 668 aa9.78□□□□□ -0.84
TGFB3-201ENST00000238682 KRT5P13647 590 aa9.78□□□□□ -0.84
TGFB3-201ENST00000238682 HNRNPH1P31943 449 aaKnown RBP9.78□□□□□ -0.84
TGFB3-201ENST00000238682 SLC11A1P49279 550 aa9.78□□□□□ -0.84
TGFB3-201ENST00000238682 RAD23BP54727 409 aa9.78□□□□□ -0.84
TGFB3-201ENST00000238682 CENPCQ03188 943 aa9.78□□□□□ -0.84
TGFB3-201ENST00000238682 C1QBPQ07021 282 aaKnown RBP9.78□□□□□ -0.84
TGFB3-201ENST00000238682 ZNF569Q5MCW4 686 aa9.78□□□□□ -0.84
TGFB3-201ENST00000238682 GPR149Q86SP6 731 aa9.78□□□□□ -0.84
TGFB3-201ENST00000238682 CCDC50Q8IVM0 306 aa9.78□□□□□ -0.84
TGFB3-201ENST00000238682 RHOT2Q8IXI1 618 aa9.78□□□□□ -0.84
TGFB3-201ENST00000238682 DCP1BQ8IZD4 617 aaKnown RBP9.78□□□□□ -0.84
TGFB3-201ENST00000238682 VPS52Q8N1B4 723 aa9.78□□□□□ -0.84
TGFB3-201ENST00000238682 N4BP2L2Q92802 583 aaPredicted RBP9.78□□□□□ -0.84
TGFB3-201ENST00000238682 NELL1Q92832 810 aa9.78□□□□□ -0.84
TGFB3-201ENST00000238682 LPPQ93052 612 aa9.78□□□□□ -0.84
TGFB3-201ENST00000238682 PI4K2AQ9BTU6 479 aa9.78□□□□□ -0.84
TGFB3-201ENST00000238682 ABCB6Q9NP58 842 aa9.78□□□□□ -0.84
TGFB3-201ENST00000238682 AJAP1Q9UKB5 411 aaPredicted RBP9.78□□□□□ -0.84
TGFB3-201ENST00000238682 TFR2Q9UP52 801 aa9.78□□□□□ -0.84
TGFB3-201ENST00000238682 REXO2Q9Y3B8 237 aaKnown RBP9.78□□□□□ -0.84
TGFB3-201ENST00000238682 SNX9Q9Y5X1 595 aa9.78□□□□□ -0.84
TGFB3-201ENST00000238682 BACE2Q9Y5Z0 518 aa9.78□□□□□ -0.84
TGFB3-201ENST00000238682 CALB1P05937 261 aa9.77□□□□□ -0.85
TGFB3-201ENST00000238682 FGFR3P22607 806 aa9.77□□□□□ -0.85
TGFB3-201ENST00000238682 GNL1P36915 607 aaPredicted RBP9.77□□□□□ -0.85
TGFB3-201ENST00000238682 ETFBP38117 255 aa9.77□□□□□ -0.85
TGFB3-201ENST00000238682 ACADSBP45954 432 aa9.77□□□□□ -0.85
TGFB3-201ENST00000238682 RPL34P49207 117 aaKnown RBP9.77□□□□□ -0.85
TGFB3-201ENST00000238682 CLCNKBP51801 687 aa9.77□□□□□ -0.85
TGFB3-201ENST00000238682 APBA1Q02410 837 aa9.77□□□□□ -0.85
TGFB3-201ENST00000238682 CCDC15Q0P6D6 951 aa9.77□□□□□ -0.85
TGFB3-201ENST00000238682 TUBB2AQ13885 445 aa9.77□□□□□ -0.85
TGFB3-201ENST00000238682 SLMAPQ14BN4 828 aa9.77□□□□□ -0.85
TGFB3-201ENST00000238682 CLEC16AQ2KHT3 1053 aa9.77□□□□□ -0.85
TGFB3-201ENST00000238682 SOWAHAQ2M3V2 549 aa9.77□□□□□ -0.85
TGFB3-201ENST00000238682 MFSD4BQ5TF39 518 aa9.77□□□□□ -0.85
TGFB3-201ENST00000238682 ACAD10Q6JQN1 1059 aa9.77□□□□□ -0.85
TGFB3-201ENST00000238682 SYCE2Q6PIF2 218 aa9.77□□□□□ -0.85
TGFB3-201ENST00000238682 TMEM270Q6UE05 265 aa9.77□□□□□ -0.85
TGFB3-201ENST00000238682 ARCQ7LC44 396 aa9.77□□□□□ -0.85
TGFB3-201ENST00000238682 ZNF571Q7Z3V5 609 aaPredicted RBP9.77□□□□□ -0.85
TGFB3-201ENST00000238682 FUBP3Q96I24 572 aaKnown RBP eCLIP9.77□□□□□ -0.85
TGFB3-201ENST00000238682 CABS1Q96KC9 395 aa9.77□□□□□ -0.85
TGFB3-201ENST00000238682 KLHL5Q96PQ7 755 aa9.77□□□□□ -0.85
TGFB3-201ENST00000238682 OSBPL9Q96SU4 736 aa9.77□□□□□ -0.85
TGFB3-201ENST00000238682 TUBB2BQ9BVA1 445 aa9.77□□□□□ -0.85
TGFB3-201ENST00000238682 TRIM62Q9BVG3 475 aa9.77□□□□□ -0.85
TGFB3-201ENST00000238682 NAGPAQ9UK23 515 aa9.77□□□□□ -0.85
TGFB3-201ENST00000238682 ADAM28Q9UKQ2 775 aa9.77□□□□□ -0.85
TGFB3-201ENST00000238682 SORCS3Q9UPU3 1222 aa9.77□□□□□ -0.85
TGFB3-201ENST00000238682 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.77□□□□□ -0.85
TGFB3-201ENST00000238682 AHCYL1O43865 530 aa9.77□□□□□ -0.85
TGFB3-201ENST00000238682 ERBB2P04626 1255 aa9.77□□□□□ -0.85
TGFB3-201ENST00000238682 PLEKP08567 350 aaPredicted RBP9.77□□□□□ -0.85
TGFB3-201ENST00000238682 H2AFZP0C0S5 128 aa9.77□□□□□ -0.85
TGFB3-201ENST00000238682 ARHGAP25P42331 645 aa9.77□□□□□ -0.85
TGFB3-201ENST00000238682 FOXK1P85037 733 aa9.77□□□□□ -0.85
TGFB3-201ENST00000238682 KIF5AQ12840 1032 aa9.77□□□□□ -0.85
TGFB3-201ENST00000238682 GLRA4Q5JXX5 417 aa9.77□□□□□ -0.85
TGFB3-201ENST00000238682 GJB7Q6PEY0 223 aa9.77□□□□□ -0.85
TGFB3-201ENST00000238682 MICALCLQ6ZW33 695 aa9.77□□□□□ -0.85
TGFB3-201ENST00000238682 ANKS3Q6ZW76 656 aa9.77□□□□□ -0.85
TGFB3-201ENST00000238682 H2AFVQ71UI9 128 aa9.77□□□□□ -0.85
TGFB3-201ENST00000238682 MAB21L3Q8N8X9 362 aa9.77□□□□□ -0.85
TGFB3-201ENST00000238682 SLC4A11Q8NBS3 891 aa9.77□□□□□ -0.85
TGFB3-201ENST00000238682 WHAMMQ8TF30 809 aa9.77□□□□□ -0.85
TGFB3-201ENST00000238682 MMS19Q96T76 1030 aa9.77□□□□□ -0.85
TGFB3-201ENST00000238682 HNRNPABQ99729 332 aaKnown RBP9.77□□□□□ -0.85
TGFB3-201ENST00000238682 UVRAGQ9P2Y5 699 aa9.77□□□□□ -0.85
TGFB3-201ENST00000238682 NXF1Q9UBU9 619 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms