RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 HEATR4Q86WZ0 1026 aa13.78□□□□□ -0.2
NEK4-201ENST00000233027 MCOLN2Q8IZK6 566 aa13.78□□□□□ -0.2
NEK4-201ENST00000233027 GDPD5Q8WTR4 605 aa13.78□□□□□ -0.2
NEK4-201ENST00000233027 RNPEPQ9H4A4 650 aa13.78□□□□□ -0.2
NEK4-201ENST00000233027 AGO4Q9HCK5 861 aaKnown RBP13.78□□□□□ -0.2
NEK4-201ENST00000233027 POLLQ9UGP5 575 aa13.78□□□□□ -0.2
NEK4-201ENST00000233027 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.78□□□□□ -0.2
NEK4-201ENST00000233027 F8W810 466 aa13.78□□□□□ -0.2
NEK4-201ENST00000233027 CYB561D2O14569 222 aa13.78□□□□□ -0.2
NEK4-201ENST00000233027 GUCA1CO95843 209 aa13.78□□□□□ -0.2
NEK4-201ENST00000233027 GSNP06396 782 aa13.78□□□□□ -0.2
NEK4-201ENST00000233027 TPH1P17752 444 aa13.78□□□□□ -0.2
NEK4-201ENST00000233027 CDC25CP30307 473 aa13.78□□□□□ -0.2
NEK4-201ENST00000233027 SSTR1P30872 391 aa13.78□□□□□ -0.2
NEK4-201ENST00000233027 SARSP49591 514 aaKnown RBP13.78□□□□□ -0.2
NEK4-201ENST00000233027 NCALDP61601 193 aa13.78□□□□□ -0.2
NEK4-201ENST00000233027 CDC16Q13042 620 aa13.78□□□□□ -0.2
NEK4-201ENST00000233027 PLEKHA7Q6IQ23 1121 aa13.78□□□□□ -0.2
NEK4-201ENST00000233027 LRRC8DQ7L1W4 858 aa13.78□□□□□ -0.2
NEK4-201ENST00000233027 TMEM176AQ96HP8 235 aa13.78□□□□□ -0.2
NEK4-201ENST00000233027 FAR2Q96K12 515 aa13.78□□□□□ -0.2
NEK4-201ENST00000233027 KCTD14Q9BQ13 255 aaPredicted RBP13.78□□□□□ -0.2
NEK4-201ENST00000233027 BAIAP3O94812 1187 aa13.78□□□□□ -0.2
NEK4-201ENST00000233027 GJB6O95452 261 aa13.78□□□□□ -0.2
NEK4-201ENST00000233027 PBLDP30039 288 aaPredicted RBP13.78□□□□□ -0.2
NEK4-201ENST00000233027 PPATQ06203 517 aa13.78□□□□□ -0.2
NEK4-201ENST00000233027 ANGPT1Q15389 498 aa13.78□□□□□ -0.2
NEK4-201ENST00000233027 PKN2Q16513 984 aaKnown RBP13.78□□□□□ -0.2
NEK4-201ENST00000233027 RAB21Q9UL25 225 aa13.78□□□□□ -0.2
NEK4-201ENST00000233027 USP20Q9Y2K6 914 aa13.78□□□□□ -0.2
NEK4-201ENST00000233027 CBX6O95503 412 aa13.77□□□□□ -0.2
NEK4-201ENST00000233027 SLC25A27O95847 323 aa13.77□□□□□ -0.2
NEK4-201ENST00000233027 RARAP10276 462 aa13.77□□□□□ -0.2
NEK4-201ENST00000233027 TRAF2Q12933 501 aa13.77□□□□□ -0.2
NEK4-201ENST00000233027 CDH18Q13634 790 aa13.77□□□□□ -0.2
NEK4-201ENST00000233027 TRIM25Q14258 630 aaKnown RBP13.77□□□□□ -0.2
NEK4-201ENST00000233027 CNPY4Q8N129 248 aa13.77□□□□□ -0.2
NEK4-201ENST00000233027 WDR48Q8TAF3 677 aa13.77□□□□□ -0.2
NEK4-201ENST00000233027 ACTL9Q8TC94 416 aa13.77□□□□□ -0.2
NEK4-201ENST00000233027 JADE3Q92613 823 aa13.77□□□□□ -0.2
NEK4-201ENST00000233027 BTBD10Q9BSF8 475 aa13.77□□□□□ -0.2
NEK4-201ENST00000233027 C10orf88Q9H8K7 445 aa13.77□□□□□ -0.2
NEK4-201ENST00000233027 GARTP22102 1010 aa13.77□□□□□ -0.2
NEK4-201ENST00000233027 XRRA1Q6P2D8 792 aa13.77□□□□□ -0.2
NEK4-201ENST00000233027 CES3Q6UWW8 571 aa13.77□□□□□ -0.2
NEK4-201ENST00000233027 POU5F2Q8N7G0 328 aa13.77□□□□□ -0.2
NEK4-201ENST00000233027 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.77□□□□□ -0.2
NEK4-201ENST00000233027 MTERF3Q96E29 417 aa13.77□□□□□ -0.2
NEK4-201ENST00000233027 PHF21BQ96EK2 531 aa13.77□□□□□ -0.2
NEK4-201ENST00000233027 DUSP9Q99956 384 aaKnown RBP13.77□□□□□ -0.2
NEK4-201ENST00000233027 RTFDC1Q9BY42 306 aaPredicted RBP13.77□□□□□ -0.2
NEK4-201ENST00000233027 SYNDIG1Q9H7V2 258 aa13.77□□□□□ -0.2
NEK4-201ENST00000233027 GPAMQ9HCL2 828 aa13.77□□□□□ -0.2
NEK4-201ENST00000233027 SOX13Q9UN79 622 aa13.77□□□□□ -0.2
NEK4-201ENST00000233027 ZC3H11AO75152 810 aaKnown RBP eCLIP13.77□□□□□ -0.21
NEK4-201ENST00000233027 CSTF3Q12996 717 aaKnown RBP13.77□□□□□ -0.21
NEK4-201ENST00000233027 TRIP4Q15650 581 aaPredicted RBP13.77□□□□□ -0.21
NEK4-201ENST00000233027 ATP6AP1LQ52LC2 224 aa13.77□□□□□ -0.21
NEK4-201ENST00000233027 TTMPQ5BVD1 217 aa13.77□□□□□ -0.21
NEK4-201ENST00000233027 ARHGAP17Q68EM7 881 aa13.77□□□□□ -0.21
NEK4-201ENST00000233027 ZBTB49Q6ZSB9 765 aa13.77□□□□□ -0.21
NEK4-201ENST00000233027 ZCCHC23Q6ZST2 131 aa13.77□□□□□ -0.21
NEK4-201ENST00000233027 FBXO16Q8IX29 292 aaPredicted RBP13.77□□□□□ -0.21
NEK4-201ENST00000233027 MPP4Q96JB8 637 aa13.77□□□□□ -0.21
NEK4-201ENST00000233027 JCHAINP01591 159 aa13.77□□□□□ -0.21
NEK4-201ENST00000233027 SV2AQ7L0J3 742 aa13.77□□□□□ -0.21
NEK4-201ENST00000233027 OXNAD1Q96HP4 312 aaPredicted RBP13.77□□□□□ -0.21
NEK4-201ENST00000233027 TLR10Q9BXR5 811 aa13.77□□□□□ -0.21
NEK4-201ENST00000233027 VANGL2Q9ULK5 521 aa13.77□□□□□ -0.21
NEK4-201ENST00000233027 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.77□□□□□ -0.21
NEK4-201ENST00000233027 CXCL8P10145 99 aa13.77□□□□□ -0.21
NEK4-201ENST00000233027 PEX5P50542 639 aa13.77□□□□□ -0.21
NEK4-201ENST00000233027 ZNF177Q13360 481 aaPredicted RBP13.77□□□□□ -0.21
NEK4-201ENST00000233027 MPP3Q13368 585 aa13.77□□□□□ -0.21
NEK4-201ENST00000233027 MOXD1Q6UVY6 613 aa13.77□□□□□ -0.21
NEK4-201ENST00000233027 RIPOR1Q6ZS17 1223 aa13.77□□□□□ -0.21
NEK4-201ENST00000233027 CCNJLQ8IV13 435 aa13.77□□□□□ -0.21
NEK4-201ENST00000233027 CCDC126Q96EE4 140 aa13.77□□□□□ -0.21
NEK4-201ENST00000233027 PRMT6Q96LA8 375 aaPredicted RBP13.77□□□□□ -0.21
NEK4-201ENST00000233027 PPP1R10Q96QC0 940 aaKnown RBP13.77□□□□□ -0.21
NEK4-201ENST00000233027 PXMP2Q9NR77 195 aa13.77□□□□□ -0.21
NEK4-201ENST00000233027 PCDHB7Q9Y5E2 793 aa13.77□□□□□ -0.21
NEK4-201ENST00000233027 ADGRA3Q8IWK6 1321 aa13.77□□□□□ -0.21
NEK4-201ENST00000233027 TCRBV5S4A2TA0A5A2 114 aa13.76□□□□□ -0.21
NEK4-201ENST00000233027 C17orf102A2RUQ5 167 aa13.76□□□□□ -0.21
NEK4-201ENST00000233027 TMEM150BA6NC51 233 aa13.76□□□□□ -0.21
NEK4-201ENST00000233027 CFAP99D6REC4 459 aa13.76□□□□□ -0.21
NEK4-201ENST00000233027 POU1F1P28069 291 aa13.76□□□□□ -0.21
NEK4-201ENST00000233027 ITGA9Q13797 1035 aa13.76□□□□□ -0.21
NEK4-201ENST00000233027 KCTD19Q17RG1 926 aaPredicted RBP13.76□□□□□ -0.21
NEK4-201ENST00000233027 TBCELQ5QJ74 424 aa13.76□□□□□ -0.21
NEK4-201ENST00000233027 INTS5Q6P9B9 1019 aaKnown RBP13.76□□□□□ -0.21
NEK4-201ENST00000233027 TRIM69Q86WT6 500 aa13.76□□□□□ -0.21
NEK4-201ENST00000233027 WDR49Q8IV35 697 aa13.76□□□□□ -0.21
NEK4-201ENST00000233027 RNF148Q8N7C7 305 aa13.76□□□□□ -0.21
NEK4-201ENST00000233027 GPRC5AQ8NFJ5 357 aa13.76□□□□□ -0.21
NEK4-201ENST00000233027 CELF6Q96J87 481 aaKnown RBP13.76□□□□□ -0.21
NEK4-201ENST00000233027 PNMA5Q96PV4 448 aa13.76□□□□□ -0.21
NEK4-201ENST00000233027 SEPHS2Q99611 448 aa13.76□□□□□ -0.21
NEK4-201ENST00000233027 KLHL25Q9H0H3 589 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms