RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 MRPL1Q9BYD6 325 aaKnown RBP19.06■□□□□ 0.64
CLIP2-201ENST00000223398 MFSD1Q9H3U5 465 aa19.06■□□□□ 0.64
CLIP2-201ENST00000223398 MRPL17Q9NRX2 175 aaKnown RBP19.06■□□□□ 0.64
CLIP2-201ENST00000223398 FRMPD4Q14CM0 1322 aa19.05■□□□□ 0.64
CLIP2-201ENST00000223398 TMEM120BA0PK00 339 aa19.05■□□□□ 0.64
CLIP2-201ENST00000223398 RAMP2O60895 175 aa19.05■□□□□ 0.64
CLIP2-201ENST00000223398 PROSCO94903 275 aa19.05■□□□□ 0.64
CLIP2-201ENST00000223398 VCLP18206 1134 aa19.05■□□□□ 0.64
CLIP2-201ENST00000223398 AP2B1P63010 937 aa19.05■□□□□ 0.64
CLIP2-201ENST00000223398 YWHAZP63104 245 aaKnown RBP19.05■□□□□ 0.64
CLIP2-201ENST00000223398 CAMK2GQ13555 558 aaPredicted RBP19.05■□□□□ 0.64
CLIP2-201ENST00000223398 AARS2Q5JTZ9 985 aaKnown RBP19.05■□□□□ 0.64
CLIP2-201ENST00000223398 UNKQ9C0B0 810 aaKnown RBP19.05■□□□□ 0.64
CLIP2-201ENST00000223398 CAPN6Q9Y6Q1 641 aa19.05■□□□□ 0.64
CLIP2-201ENST00000223398 V9GYQ6 96 aa19.05■□□□□ 0.64
CLIP2-201ENST00000223398 TMEM88BA6NKF7 163 aa19.05■□□□□ 0.64
CLIP2-201ENST00000223398 SMAPO00193 183 aa19.05■□□□□ 0.64
CLIP2-201ENST00000223398 MAPTP10636 758 aaKnown RBP19.05■□□□□ 0.64
CLIP2-201ENST00000223398 MRPS6P82932 125 aaKnown RBP19.05■□□□□ 0.64
CLIP2-201ENST00000223398 HIC1Q14526 733 aa19.05■□□□□ 0.64
CLIP2-201ENST00000223398 TMEM119Q4V9L6 283 aa19.05■□□□□ 0.64
CLIP2-201ENST00000223398 GRAMD1AQ96CP6 724 aa19.05■□□□□ 0.64
CLIP2-201ENST00000223398 C17orf80Q9BSJ5 609 aa19.05■□□□□ 0.64
CLIP2-201ENST00000223398 FAM129AQ9BZQ8 928 aa19.05■□□□□ 0.64
CLIP2-201ENST00000223398 CACNA2D2Q9NY47 1150 aa19.05■□□□□ 0.64
CLIP2-201ENST00000223398 SKAP2O75563 359 aaPredicted RBP19.05■□□□□ 0.64
CLIP2-201ENST00000223398 SEC24DO94855 1032 aaPredicted RBP19.05■□□□□ 0.64
CLIP2-201ENST00000223398 FGFR1P11362 822 aa19.05■□□□□ 0.64
CLIP2-201ENST00000223398 ALOX15P16050 662 aaPredicted RBP19.05■□□□□ 0.64
CLIP2-201ENST00000223398 HPCAP84074 193 aa19.05■□□□□ 0.64
CLIP2-201ENST00000223398 ERMARDQ5T6L9 678 aa19.05■□□□□ 0.64
CLIP2-201ENST00000223398 PATL1Q86TB9 770 aaKnown RBP19.05■□□□□ 0.64
CLIP2-201ENST00000223398 DEFB106AQ8N104 65 aa19.05■□□□□ 0.64
CLIP2-201ENST00000223398 PIH1D1Q9NWS0 290 aaKnown RBP19.05■□□□□ 0.64
CLIP2-201ENST00000223398 SDR42E2A6NKP2 422 aa19.05■□□□□ 0.64
CLIP2-201ENST00000223398 GJB1P08034 283 aa19.05■□□□□ 0.64
CLIP2-201ENST00000223398 MARC1Q5VT66 337 aa19.05■□□□□ 0.64
CLIP2-201ENST00000223398 ICA1LQ8NDH6 482 aa19.05■□□□□ 0.64
CLIP2-201ENST00000223398 IL31RAQ8NI17 732 aa19.05■□□□□ 0.64
CLIP2-201ENST00000223398 CDK5RAP1Q96SZ6 601 aaKnown RBP19.05■□□□□ 0.64
CLIP2-201ENST00000223398 ADGRE3Q9BY15 652 aa19.05■□□□□ 0.64
CLIP2-201ENST00000223398 CYP4F12Q9HCS2 524 aa19.05■□□□□ 0.64
CLIP2-201ENST00000223398 RUVBL2Q9Y230 463 aaKnown RBP19.05■□□□□ 0.64
CLIP2-201ENST00000223398 SALL3Q9BXA9 1300 aa19.04■□□□□ 0.64
CLIP2-201ENST00000223398 CHUKO15111 745 aa19.04■□□□□ 0.64
CLIP2-201ENST00000223398 GZMAP12544 262 aa19.04■□□□□ 0.64
CLIP2-201ENST00000223398 TPH1P17752 444 aa19.04■□□□□ 0.64
CLIP2-201ENST00000223398 FOXP3Q9BZS1 431 aa19.04■□□□□ 0.64
CLIP2-201ENST00000223398 ZNF541Q9H0D2 1346 aa19.04■□□□□ 0.64
CLIP2-201ENST00000223398 EIF4E1BA6NMX2 242 aaKnown RBP19.04■□□□□ 0.64
CLIP2-201ENST00000223398 GJB6O95452 261 aa19.04■□□□□ 0.64
CLIP2-201ENST00000223398 WSCD1Q658N2 575 aa19.04■□□□□ 0.64
CLIP2-201ENST00000223398 RETSATQ6NUM9 610 aa19.04■□□□□ 0.64
CLIP2-201ENST00000223398 MKL1Q969V6 931 aa19.04■□□□□ 0.64
CLIP2-201ENST00000223398 XPO6Q96QU8 1125 aaKnown RBP19.04■□□□□ 0.64
CLIP2-201ENST00000223398 ELOVL4Q9GZR5 314 aa19.04■□□□□ 0.64
CLIP2-201ENST00000223398 PORCNQ9H237 461 aa19.04■□□□□ 0.64
CLIP2-201ENST00000223398 PPLO60437 1756 aa19.04■□□□□ 0.64
CLIP2-201ENST00000223398 CRTAMO95727 393 aa19.04■□□□□ 0.64
CLIP2-201ENST00000223398 CD52P31358 61 aa19.04■□□□□ 0.64
CLIP2-201ENST00000223398 PRKCQQ04759 706 aa19.04■□□□□ 0.64
CLIP2-201ENST00000223398 SGCGQ13326 291 aa19.04■□□□□ 0.64
CLIP2-201ENST00000223398 SHROOM1Q2M3G4 852 aaPredicted RBP19.04■□□□□ 0.64
CLIP2-201ENST00000223398 ZNF558Q96NG5 402 aa19.04■□□□□ 0.64
CLIP2-201ENST00000223398 HLA-DPA1P20036 260 aa19.04■□□□□ 0.64
CLIP2-201ENST00000223398 FNDC3BQ53EP0 1204 aaKnown RBP19.04■□□□□ 0.64
CLIP2-201ENST00000223398 COLGALT1Q8NBJ5 622 aa19.04■□□□□ 0.64
CLIP2-201ENST00000223398 RIC8BQ9NVN3 520 aa19.04■□□□□ 0.64
CLIP2-201ENST00000223398 TUFMP49411 452 aaKnown RBP19.03■□□□□ 0.64
CLIP2-201ENST00000223398 POU6F1Q14863 301 aa19.03■□□□□ 0.64
CLIP2-201ENST00000223398 ISCUQ9H1K1 167 aa19.03■□□□□ 0.64
CLIP2-201ENST00000223398 LOC100653049A0A140TA62 436 aa19.03■□□□□ 0.64
CLIP2-201ENST00000223398 KRT34O76011 436 aa19.03■□□□□ 0.64
CLIP2-201ENST00000223398 MDH1P40925 334 aaKnown RBP19.03■□□□□ 0.64
CLIP2-201ENST00000223398 FNTAP49354 379 aa19.03■□□□□ 0.64
CLIP2-201ENST00000223398 SLC12A3P55017 1021 aa19.03■□□□□ 0.64
CLIP2-201ENST00000223398 HNRNPH2P55795 449 aaKnown RBP19.03■□□□□ 0.64
CLIP2-201ENST00000223398 C15orf52Q6ZUT6 534 aaKnown RBP19.03■□□□□ 0.64
CLIP2-201ENST00000223398 MYO1HQ8N1T3 1032 aa19.03■□□□□ 0.64
CLIP2-201ENST00000223398 ZSWIM2Q8NEG5 633 aa19.03■□□□□ 0.64
CLIP2-201ENST00000223398 E2F7Q96AV8 911 aa19.03■□□□□ 0.64
CLIP2-201ENST00000223398 UTP6Q9NYH9 597 aaKnown RBP19.03■□□□□ 0.64
CLIP2-201ENST00000223398 AGAP9Q5VTM2 703 aa19.03■□□□□ 0.64
CLIP2-201ENST00000223398 C11orf63Q6NUN7 778 aa19.03■□□□□ 0.64
CLIP2-201ENST00000223398 DENND1BQ6P3S1 775 aa19.03■□□□□ 0.64
CLIP2-201ENST00000223398 A0A087X0B3 334 aa19.03■□□□□ 0.64
CLIP2-201ENST00000223398 AMPD1P23109 780 aa19.03■□□□□ 0.64
CLIP2-201ENST00000223398 GLRA2P23416 452 aa19.03■□□□□ 0.64
CLIP2-201ENST00000223398 CDC16Q13042 620 aa19.03■□□□□ 0.64
CLIP2-201ENST00000223398 MAPK7Q13164 816 aa19.03■□□□□ 0.64
CLIP2-201ENST00000223398 MRIQ9BWK5 157 aa19.03■□□□□ 0.64
CLIP2-201ENST00000223398 FBXO10Q9UK96 956 aa19.03■□□□□ 0.64
CLIP2-201ENST00000223398 UMODL1Q5DID0 1318 aa19.03■□□□□ 0.64
CLIP2-201ENST00000223398 CALCAP01258 141 aa19.03■□□□□ 0.64
CLIP2-201ENST00000223398 POLE2P56282 527 aa19.03■□□□□ 0.64
CLIP2-201ENST00000223398 RBM23Q86U06 439 aaKnown RBP19.03■□□□□ 0.64
CLIP2-201ENST00000223398 ST13P4Q8IZP2 240 aaPredicted RBP19.03■□□□□ 0.64
CLIP2-201ENST00000223398 FAM162AQ96A26 154 aa19.03■□□□□ 0.64
CLIP2-201ENST00000223398 HES6Q96HZ4 224 aa19.03■□□□□ 0.64
CLIP2-201ENST00000223398 FAM111AQ96PZ2 611 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms