RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 MARCOQ9UEW3 520 aaPredicted RBP15.21■□□□□ 0.02
CNOT3-201ENST00000221232 RGPD3A6NKT7 1758 aaPredicted RBP15.2■□□□□ 0.02
CNOT3-201ENST00000221232 RGPD4Q7Z3J3 1758 aa15.2■□□□□ 0.02
CNOT3-201ENST00000221232 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.2■□□□□ 0.02
CNOT3-201ENST00000221232 IQANK1A0A1B0GTG1 560 aa15.2■□□□□ 0.02
CNOT3-201ENST00000221232 PAPSS1O43252 624 aaPredicted RBP15.2■□□□□ 0.02
CNOT3-201ENST00000221232 METTL18O95568 372 aa15.2■□□□□ 0.02
CNOT3-201ENST00000221232 YY1P25490 414 aa15.2■□□□□ 0.02
CNOT3-201ENST00000221232 PCK1P35558 622 aa15.2■□□□□ 0.02
CNOT3-201ENST00000221232 MROH9Q5TGP6 573 aa15.2■□□□□ 0.02
CNOT3-201ENST00000221232 MAP7D3Q8IWC1 876 aa15.2■□□□□ 0.02
CNOT3-201ENST00000221232 PYROXD2Q8N2H3 581 aa15.2■□□□□ 0.02
CNOT3-201ENST00000221232 DHRS4Q9BTZ2 278 aa15.2■□□□□ 0.02
CNOT3-201ENST00000221232 IQCGQ9H095 443 aaKnown RBP15.2■□□□□ 0.02
CNOT3-201ENST00000221232 ASB7Q9H672 318 aa15.2■□□□□ 0.02
CNOT3-201ENST00000221232 CYP3A43Q9HB55 503 aa15.2■□□□□ 0.02
CNOT3-201ENST00000221232 GBA2Q9HCG7 927 aaPredicted RBP15.2■□□□□ 0.02
CNOT3-201ENST00000221232 SMYD2Q9NRG4 433 aa15.2■□□□□ 0.02
CNOT3-201ENST00000221232 TMPRSS4Q9NRS4 437 aa15.2■□□□□ 0.02
CNOT3-201ENST00000221232 ARMCX1Q9P291 453 aa15.2■□□□□ 0.02
CNOT3-201ENST00000221232 SLC17A6Q9P2U8 582 aa15.2■□□□□ 0.02
CNOT3-201ENST00000221232 FAM237BA0A1B0GVD1 139 aa15.2■□□□□ 0.02
CNOT3-201ENST00000221232 H3BRB1 525 aa15.2■□□□□ 0.02
CNOT3-201ENST00000221232 ENTPD5O75356 428 aa15.2■□□□□ 0.02
CNOT3-201ENST00000221232 SERPINB3P29508 390 aa15.2■□□□□ 0.02
CNOT3-201ENST00000221232 SLC10A2Q12908 348 aaPredicted RBP15.2■□□□□ 0.02
CNOT3-201ENST00000221232 ZNF618Q5T7W0 954 aa15.2■□□□□ 0.02
CNOT3-201ENST00000221232 TTC7BQ86TV6 843 aa15.2■□□□□ 0.02
CNOT3-201ENST00000221232 ANKRD13AQ8IZ07 590 aa15.2■□□□□ 0.02
CNOT3-201ENST00000221232 ARMC2Q8NEN0 867 aa15.2■□□□□ 0.02
CNOT3-201ENST00000221232 KHSRPQ92945 711 aaKnown RBP eCLIP15.2■□□□□ 0.02
CNOT3-201ENST00000221232 TUT1Q9H6E5 874 aaKnown RBP15.2■□□□□ 0.02
CNOT3-201ENST00000221232 A8MXQ7 604 aa15.19■□□□□ 0.02
CNOT3-201ENST00000221232 GM2AP17900 193 aa15.19■□□□□ 0.02
CNOT3-201ENST00000221232 OSBPP22059 807 aa15.19■□□□□ 0.02
CNOT3-201ENST00000221232 LMO2P25791 158 aa15.19■□□□□ 0.02
CNOT3-201ENST00000221232 ATICP31939 592 aa15.19■□□□□ 0.02
CNOT3-201ENST00000221232 CPA2P48052 419 aa15.19■□□□□ 0.02
CNOT3-201ENST00000221232 SLC26A2P50443 739 aa15.19■□□□□ 0.02
CNOT3-201ENST00000221232 RABGGTBP53611 331 aa15.19■□□□□ 0.02
CNOT3-201ENST00000221232 MTHFD1LQ6UB35 978 aa15.19■□□□□ 0.02
CNOT3-201ENST00000221232 CAND1Q86VP6 1230 aaKnown RBP15.19■□□□□ 0.02
CNOT3-201ENST00000221232 FAM13CQ8NE31 585 aa15.19■□□□□ 0.02
CNOT3-201ENST00000221232 SLC44A1Q8WWI5 657 aa15.19■□□□□ 0.02
CNOT3-201ENST00000221232 PGLYRP2Q96PD5 576 aa15.19■□□□□ 0.02
CNOT3-201ENST00000221232 RAB3IPQ96QF0 476 aaPredicted RBP15.19■□□□□ 0.02
CNOT3-201ENST00000221232 ETNK2Q9NVF9 386 aa15.19■□□□□ 0.02
CNOT3-201ENST00000221232 ARL8BQ9NVJ2 186 aa15.19■□□□□ 0.02
CNOT3-201ENST00000221232 NOP53Q9NZM5 478 aaKnown RBP15.19■□□□□ 0.02
CNOT3-201ENST00000221232 MGAMO43451 1857 aa15.19■□□□□ 0.02
CNOT3-201ENST00000221232 E2F8A0AVK6 867 aa15.19■□□□□ 0.02
CNOT3-201ENST00000221232 COPEO14579 308 aa15.19■□□□□ 0.02
CNOT3-201ENST00000221232 CCND1P24385 295 aa15.19■□□□□ 0.02
CNOT3-201ENST00000221232 CYP2F1P24903 491 aa15.19■□□□□ 0.02
CNOT3-201ENST00000221232 ARFIP2P53365 341 aa15.19■□□□□ 0.02
CNOT3-201ENST00000221232 HDAC4P56524 1084 aa15.19■□□□□ 0.02
CNOT3-201ENST00000221232 ZNF484Q5JVG2 852 aa15.19■□□□□ 0.02
CNOT3-201ENST00000221232 CASC4Q6P4E1 433 aa15.19■□□□□ 0.02
CNOT3-201ENST00000221232 OLFML1Q6UWY5 402 aa15.19■□□□□ 0.02
CNOT3-201ENST00000221232 CLNKQ7Z7G1 428 aa15.19■□□□□ 0.02
CNOT3-201ENST00000221232 SRPK1Q96SB4 655 aaKnown RBP15.19■□□□□ 0.02
CNOT3-201ENST00000221232 TRIM55Q9BYV6 548 aa15.19■□□□□ 0.02
CNOT3-201ENST00000221232 IL1RAPL1Q9NZN1 696 aa15.19■□□□□ 0.02
CNOT3-201ENST00000221232 C15orf41Q9Y2V0 281 aa15.19■□□□□ 0.02
CNOT3-201ENST00000221232 F7P08709 466 aaPredicted RBP15.18■□□□□ 0.02
CNOT3-201ENST00000221232 AMPD1P23109 780 aa15.18■□□□□ 0.02
CNOT3-201ENST00000221232 ADORA2AP29274 412 aa15.18■□□□□ 0.02
CNOT3-201ENST00000221232 SESN3P58005 492 aa15.18■□□□□ 0.02
CNOT3-201ENST00000221232 CCDC15Q0P6D6 951 aa15.18■□□□□ 0.02
CNOT3-201ENST00000221232 FAM47CQ5HY64 1035 aa15.18■□□□□ 0.02
CNOT3-201ENST00000221232 TAPT1Q6NXT6 567 aa15.18■□□□□ 0.02
CNOT3-201ENST00000221232 RFWD3Q6PCD5 774 aa15.18■□□□□ 0.02
CNOT3-201ENST00000221232 RGS9BPQ6ZS82 235 aa15.18■□□□□ 0.02
CNOT3-201ENST00000221232 TMEM120AQ9BXJ8 343 aa15.18■□□□□ 0.02
CNOT3-201ENST00000221232 FRMD8P1Q9BZ68 369 aaPredicted RBP15.18■□□□□ 0.02
CNOT3-201ENST00000221232 GOLGA2P5Q9HBQ8 144 aa15.18■□□□□ 0.02
CNOT3-201ENST00000221232 CYLDQ9NQC7 956 aa15.18■□□□□ 0.02
CNOT3-201ENST00000221232 ADARB2Q9NS39 739 aaKnown RBP15.18■□□□□ 0.02
CNOT3-201ENST00000221232 RNF181Q9P0P0 153 aa15.18■□□□□ 0.02
CNOT3-201ENST00000221232 HESX1Q9UBX0 185 aa15.18■□□□□ 0.02
CNOT3-201ENST00000221232 MAGED2Q9UNF1 606 aaPredicted RBP15.18■□□□□ 0.02
CNOT3-201ENST00000221232 PPME1Q9Y570 386 aa15.18■□□□□ 0.02
CNOT3-201ENST00000221232 NDC80O14777 642 aa15.18■□□□□ 0.02
CNOT3-201ENST00000221232 ENDOD1O94919 500 aa15.18■□□□□ 0.02
CNOT3-201ENST00000221232 SLC18A1P54219 525 aa15.18■□□□□ 0.02
CNOT3-201ENST00000221232 SLC6A3Q01959 620 aa15.18■□□□□ 0.02
CNOT3-201ENST00000221232 TRIM68Q6AZZ1 485 aa15.18■□□□□ 0.02
CNOT3-201ENST00000221232 CDCA5Q96FF9 252 aa15.18■□□□□ 0.02
CNOT3-201ENST00000221232 PAK5Q9P286 719 aa15.18■□□□□ 0.02
CNOT3-201ENST00000221232 ALADP13716 330 aa15.18■□□□□ 0.02
CNOT3-201ENST00000221232 LAMC2Q13753 1193 aa15.18■□□□□ 0.02
CNOT3-201ENST00000221232 BOLA3Q53S33 107 aa15.18■□□□□ 0.02
CNOT3-201ENST00000221232 ZCCHC23Q6ZST2 131 aa15.18■□□□□ 0.02
CNOT3-201ENST00000221232 OSMRQ99650 979 aa15.18■□□□□ 0.02
CNOT3-201ENST00000221232 FAM167BQ9BTA0 163 aa15.18■□□□□ 0.02
CNOT3-201ENST00000221232 KLC2Q9H0B6 622 aa15.18■□□□□ 0.02
CNOT3-201ENST00000221232 LRMDAQ9H2I8 198 aa15.18■□□□□ 0.02
CNOT3-201ENST00000221232 EBF2Q9HAK2 575 aa15.18■□□□□ 0.02
CNOT3-201ENST00000221232 PLAC1Q9HBJ0 212 aa15.18■□□□□ 0.02
CNOT3-201ENST00000221232 PCMTD2Q9NV79 361 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms