RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 KATNAL1Q9BW62 490 aa10.76□□□□□ -0.69
VCL-201ENST00000211998 TRIM54Q9BYV2 358 aa10.76□□□□□ -0.69
VCL-201ENST00000211998 H2AFY2Q9P0M6 372 aaPredicted RBP10.76□□□□□ -0.69
VCL-201ENST00000211998 WDR35Q9P2L0 1181 aa10.76□□□□□ -0.69
VCL-201ENST00000211998 PCDHGA3Q9Y5H0 932 aa10.76□□□□□ -0.69
VCL-201ENST00000211998 SLC1A6P48664 564 aa10.76□□□□□ -0.69
VCL-201ENST00000211998 ZNF846Q147U1 533 aa10.76□□□□□ -0.69
VCL-201ENST00000211998 PARP6Q2NL67 630 aa10.76□□□□□ -0.69
VCL-201ENST00000211998 ZNF57Q68EA5 555 aaPredicted RBP10.76□□□□□ -0.69
VCL-201ENST00000211998 BHLHE22Q8NFJ8 381 aaPredicted RBP10.76□□□□□ -0.69
VCL-201ENST00000211998 ACSF2Q96CM8 615 aaPredicted RBP10.76□□□□□ -0.69
VCL-201ENST00000211998 MAP3K14Q99558 947 aa10.76□□□□□ -0.69
VCL-201ENST00000211998 TEX13BQ9BXU2 312 aa10.76□□□□□ -0.69
VCL-201ENST00000211998 FRMD8Q9BZ67 464 aaPredicted RBP10.76□□□□□ -0.69
VCL-201ENST00000211998 TCF7L2Q9NQB0 619 aa10.76□□□□□ -0.69
VCL-201ENST00000211998 NINJ2Q9NZG7 142 aa10.76□□□□□ -0.69
VCL-201ENST00000211998 NR5A2O00482 541 aa10.76□□□□□ -0.69
VCL-201ENST00000211998 SEC24AO95486 1093 aa10.76□□□□□ -0.69
VCL-201ENST00000211998 COX10Q12887 443 aa10.76□□□□□ -0.69
VCL-201ENST00000211998 OR7A2PQ8NGA2 310 aa10.76□□□□□ -0.69
VCL-201ENST00000211998 TBC1D16Q8TBP0 767 aa10.76□□□□□ -0.69
VCL-201ENST00000211998 ASIC4Q96FT7 647 aa10.76□□□□□ -0.69
VCL-201ENST00000211998 C9orf16Q9BUW7 83 aa10.76□□□□□ -0.69
VCL-201ENST00000211998 POLR1BQ9H9Y6 1135 aa10.76□□□□□ -0.69
VCL-201ENST00000211998 RIC8BQ9NVN3 520 aa10.76□□□□□ -0.69
VCL-201ENST00000211998 MTMR4Q9NYA4 1195 aa10.76□□□□□ -0.69
VCL-201ENST00000211998 AFF4Q9UHB7 1163 aaKnown RBP10.76□□□□□ -0.69
VCL-201ENST00000211998 WDR37Q9Y2I8 494 aa10.76□□□□□ -0.69
VCL-201ENST00000211998 UNC13BO14795 1591 aa10.76□□□□□ -0.69
VCL-201ENST00000211998 C3orf70A6NLC5 250 aaPredicted RBP10.76□□□□□ -0.69
VCL-201ENST00000211998 CES2O00748 559 aa10.76□□□□□ -0.69
VCL-201ENST00000211998 CPB1P15086 417 aa10.76□□□□□ -0.69
VCL-201ENST00000211998 CCNA2P20248 432 aa10.76□□□□□ -0.69
VCL-201ENST00000211998 ZNF543Q08ER8 600 aa10.76□□□□□ -0.69
VCL-201ENST00000211998 AGKQ53H12 422 aa10.76□□□□□ -0.69
VCL-201ENST00000211998 CENPLQ8N0S6 344 aaPredicted RBP10.76□□□□□ -0.69
VCL-201ENST00000211998 SKA1Q96BD8 255 aa10.76□□□□□ -0.69
VCL-201ENST00000211998 FAR2Q96K12 515 aa10.76□□□□□ -0.69
VCL-201ENST00000211998 CCDC28BQ9BUN5 200 aa10.76□□□□□ -0.69
VCL-201ENST00000211998 GTF3C4Q9UKN8 822 aa10.76□□□□□ -0.69
VCL-201ENST00000211998 JCADQ9P266 1359 aa10.76□□□□□ -0.69
VCL-201ENST00000211998 LRRC7Q96NW7 1537 aa10.76□□□□□ -0.69
VCL-201ENST00000211998 A0A0A6YYK5 440 aaPredicted RBP10.75□□□□□ -0.69
VCL-201ENST00000211998 PRR23AA6NEV1 266 aa10.75□□□□□ -0.69
VCL-201ENST00000211998 SLC25A3Q00325 362 aa10.75□□□□□ -0.69
VCL-201ENST00000211998 SLC9A5Q14940 896 aa10.75□□□□□ -0.69
VCL-201ENST00000211998 FAXCQ5TGI0 409 aa10.75□□□□□ -0.69
VCL-201ENST00000211998 NUDT18Q6ZVK8 323 aa10.75□□□□□ -0.69
VCL-201ENST00000211998 FGD2Q7Z6J4 655 aa10.75□□□□□ -0.69
VCL-201ENST00000211998 FBXW8Q8N3Y1 598 aa10.75□□□□□ -0.69
VCL-201ENST00000211998 REEP2Q9BRK0 252 aa10.75□□□□□ -0.69
VCL-201ENST00000211998 MOSPD1Q9UJG1 213 aa10.75□□□□□ -0.69
VCL-201ENST00000211998 DAGLAQ9Y4D2 1042 aa10.75□□□□□ -0.69
VCL-201ENST00000211998 PNPLA6Q8IY17 1366 aa10.75□□□□□ -0.69
VCL-201ENST00000211998 PXDNLA1KZ92 1463 aa10.75□□□□□ -0.69
VCL-201ENST00000211998 SUPT3HB4E1H0 165 aa10.75□□□□□ -0.69
VCL-201ENST00000211998 C5orf58C9J3I9 102 aa10.75□□□□□ -0.69
VCL-201ENST00000211998 VWA5AO00534 786 aa10.75□□□□□ -0.69
VCL-201ENST00000211998 PSMD3O43242 534 aa10.75□□□□□ -0.69
VCL-201ENST00000211998 CAMTA2O94983 1202 aa10.75□□□□□ -0.69
VCL-201ENST00000211998 MYCP01106 439 aaPredicted RBP10.75□□□□□ -0.69
VCL-201ENST00000211998 TXNP10599 105 aaKnown RBP10.75□□□□□ -0.69
VCL-201ENST00000211998 UQCRBP14927 111 aa10.75□□□□□ -0.69
VCL-201ENST00000211998 ADRA1DP25100 572 aa10.75□□□□□ -0.69
VCL-201ENST00000211998 PIK3R1P27986 724 aa10.75□□□□□ -0.69
VCL-201ENST00000211998 HSD17B4P51659 736 aa10.75□□□□□ -0.69
VCL-201ENST00000211998 PWP1Q13610 501 aa10.75□□□□□ -0.69
VCL-201ENST00000211998 BMPR2Q13873 1038 aa10.75□□□□□ -0.69
VCL-201ENST00000211998 HHIPL2Q6UWX4 724 aa10.75□□□□□ -0.69
VCL-201ENST00000211998 ATG9AQ7Z3C6 839 aa10.75□□□□□ -0.69
VCL-201ENST00000211998 DNAAF5Q86Y56 855 aa10.75□□□□□ -0.69
VCL-201ENST00000211998 SHCBP1Q8NEM2 672 aa10.75□□□□□ -0.69
VCL-201ENST00000211998 OR6J1Q8NGC5 347 aa10.75□□□□□ -0.69
VCL-201ENST00000211998 ZNF669Q96BR6 464 aaPredicted RBP10.75□□□□□ -0.69
VCL-201ENST00000211998 BDH2Q9BUT1 245 aa10.75□□□□□ -0.69
VCL-201ENST00000211998 JMJD4Q9H9V9 463 aa10.75□□□□□ -0.69
VCL-201ENST00000211998 GPBP1L1Q9HC44 474 aaPredicted RBP10.75□□□□□ -0.69
VCL-201ENST00000211998 PCDH12Q9NPG4 1184 aa10.75□□□□□ -0.69
VCL-201ENST00000211998 NDFIP2Q9NV92 336 aa10.75□□□□□ -0.69
VCL-201ENST00000211998 CIDEBQ9UHD4 219 aa10.75□□□□□ -0.69
VCL-201ENST00000211998 ADAM30Q9UKF2 790 aa10.75□□□□□ -0.69
VCL-201ENST00000211998 EVPLLA8MZ36 301 aa10.75□□□□□ -0.69
VCL-201ENST00000211998 TRMUO75648 421 aaKnown RBP10.75□□□□□ -0.69
VCL-201ENST00000211998 CPA3P15088 417 aa10.75□□□□□ -0.69
VCL-201ENST00000211998 PON1P27169 355 aa10.75□□□□□ -0.69
VCL-201ENST00000211998 SKIV2L2P42285 1042 aaKnown RBP10.75□□□□□ -0.69
VCL-201ENST00000211998 HMGCS2P54868 508 aa10.75□□□□□ -0.69
VCL-201ENST00000211998 ANTXR2P58335 489 aa10.75□□□□□ -0.69
VCL-201ENST00000211998 TAB1Q15750 504 aa10.75□□□□□ -0.69
VCL-201ENST00000211998 EPC2Q52LR7 807 aa10.75□□□□□ -0.69
VCL-201ENST00000211998 TTI2Q6NXR4 508 aa10.75□□□□□ -0.69
VCL-201ENST00000211998 ZNF571Q7Z3V5 609 aaPredicted RBP10.75□□□□□ -0.69
VCL-201ENST00000211998 KRT73Q86Y46 540 aa10.75□□□□□ -0.69
VCL-201ENST00000211998 EIF1ADQ8N9N8 165 aaKnown RBP10.75□□□□□ -0.69
VCL-201ENST00000211998 OSCP1Q8WVF1 389 aa10.75□□□□□ -0.69
VCL-201ENST00000211998 BTN2A2Q8WVV5 523 aa10.75□□□□□ -0.69
VCL-201ENST00000211998 S100ZQ8WXG8 99 aa10.75□□□□□ -0.69
VCL-201ENST00000211998 KCTD14Q9BQ13 255 aaPredicted RBP10.75□□□□□ -0.69
VCL-201ENST00000211998 RSAD1Q9HA92 442 aa10.75□□□□□ -0.69
VCL-201ENST00000211998 PIDD1Q9HB75 910 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms