RNA–Protein interactions for RNA: ENSMUST00000139443.7

Hmgb1-208, Transcript of High mobility group protein B1, mousemouse

TSL 2 BASIC

Gene Hmgb1, Length 923 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-208ENSMUST00000139443 Epn3Q91W69 636 aa16.15■□□□□ 0.18
Hmgb1-208ENSMUST00000139443 Cyp2c55Q9D816 490 aa16.15■□□□□ 0.18
Hmgb1-208ENSMUST00000139443 SgshQ9EQ08 502 aa16.15■□□□□ 0.18
Hmgb1-208ENSMUST00000139443 Lat2Q9JHL0 203 aa16.15■□□□□ 0.18
Hmgb1-208ENSMUST00000139443 Il17dA0A0B4J1G4 205 aa16.14■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Zfp626A0A0U1RQ84 676 aa16.14■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Rpl9-ps6A0A140T8T4 192 aa16.14■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 A0A286YCQ6 122 aa16.14■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Gm28042B7ZCM9 1014 aa16.14■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 PrphP15331 475 aa16.14■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Cd247P24161 164 aa16.14■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Kif4P33174 1231 aa16.14■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 TktP40142 623 aaKnown RBP16.14■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Tead2P48301 445 aa16.14■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Rpl9P51410 192 aaKnown RBP16.14■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Slc6a4Q60857 630 aa16.14■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 HarsQ61035 509 aa16.14■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Nab2Q61127 525 aa16.14■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Pabpc2Q62029 628 aa16.14■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Sorbs1Q62417 1290 aa16.14■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 DbhQ64237 622 aa16.14■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Klhl23Q6GQU2 558 aa16.14■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Kcnt1Q6ZPR4 1224 aa16.14■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Trim62Q80V85 475 aa16.14■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Kxd1Q80XH1 177 aa16.14■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Sh3rf2Q8BZT2 735 aa16.14■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Ano2Q8CFW1 1002 aa16.14■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Brd3Q8K2F0 726 aaKnown RBP16.14■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Slc8a2Q8K596 921 aa16.14■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Rpa3Q9CQ71 121 aa16.14■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Filip1Q9CS72 1211 aa16.14■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Rab11fip1Q9D620 645 aa16.14■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Ndrg2Q9QYG0 371 aaKnown RBP16.14■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Tjp2Q9Z0U1 1167 aaKnown RBP16.14■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Znf394Q9Z1D9 521 aa16.14■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Gm1993A6X8I0 212 aa16.13■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Etnk2A7MCT6 385 aa16.13■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Tmem235B1AQL3 211 aa16.13■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Cisd3B1AR13 137 aa16.13■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Zfp990B1AVN5 605 aa16.13■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 SlxD3Z347 212 aa16.13■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Gm8113E0CXS8 587 aa16.13■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Myo1eE9Q634 1107 aa16.13■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Opn1mwO35599 359 aa16.13■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Phox2bO35690 314 aa16.13■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Pla2g4bP0C871 782 aa16.13■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 RargP18911 458 aaKnown RBP16.13■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 TecP24604 630 aa16.13■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 SftpdP50404 374 aa16.13■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Rad54lP70270 747 aa16.13■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 TankP70347 448 aa16.13■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Hrh2P97292 397 aa16.13■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Cd244Q07763 397 aa16.13■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Tubal3Q3UX10 446 aa16.13■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Anapc5Q8BTZ4 740 aa16.13■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Afap1l1Q8BZI0 768 aa16.13■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Mtrf1Q8K126 446 aa16.13■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Pitrm1Q8K411 1036 aaKnown RBP16.13■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Cox18Q8VC74 331 aa16.13■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Slc25a3Q8VEM8 357 aaKnown RBP16.13■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Cox16Q9CR63 106 aa16.13■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Raver1Q9CW46 748 aaKnown RBP16.13■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Ate1Q9Z2A5 516 aa16.13■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Wdr90Q6ZPG2 1874 aa16.12■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 0610012G03RikA0A0J9YTR2 95 aa16.12■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Dmrta2A2A9A2 531 aa16.12■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Apol11aE9PZG0 334 aa16.12■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Vmn1r55E9Q8I6 310 aa16.12■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Pde8aO88502 823 aa16.12■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 CebpzP53569 1052 aaKnown RBP16.12■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Tyro3P55144 880 aa16.12■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Cntn5P68500 1098 aa16.12■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Itpripl2Q3UV16 535 aa16.12■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 FancbQ5XJY6 703 aa16.12■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Foxl1Q64731 336 aa16.12■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Gpr17Q6NS65 339 aa16.12■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Q6PAC4 1279 aa16.12■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 D130040H23RikQ8BII3 405 aa16.12■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Neto2Q8BNJ6 525 aa16.12■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Slc26a6Q8CIW6 758 aa16.12■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Pnma3Q8JZW8 466 aa16.12■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Lims2Q91XD2 341 aa16.12■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Rwdd2aQ9D9S3 292 aa16.12■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Cmtr1Q9DBC3 837 aa16.12■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Cse1lQ9ERK4 971 aaKnown RBP16.12■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Abhd2Q9QXM0 425 aa16.12■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Gm42957D6RFQ2 366 aa16.11■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Vmn1r86L7N213 316 aa16.11■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Mybpc3O70468 1270 aaKnown RBP16.11■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Coro1aO89053 461 aa16.11■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Sypl2O89104 264 aa16.11■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 CkmP07310 381 aa16.11■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Adssl1P28650 457 aa16.11■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Ptpn5P54830 541 aa16.11■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Usp25P57080 1055 aa16.11■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Itga11P61622 1188 aa16.11■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 HmmrQ00547 794 aaKnown RBP16.11■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Cdk7Q03147 346 aa16.11■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 Pou6f1Q07916 301 aa16.11■□□□□ 0.17
Hmgb1-208ENSMUST00000139443 PrlrQ08501 608 aa16.11■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 26 ms