RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Pde6bP23440 856 aa26.8■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Il1rapl1P59823 695 aa26.8■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Ugt3a1Q3UP75 523 aa26.8■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Daam2Q80U19 1115 aa26.8■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Rnf168Q80XJ2 565 aa26.8■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Csnk1g1Q8BTH8 459 aa26.8■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Defb19Q8K3I8 83 aa26.8■■□□□ 1.88
Tpm1-216ENSMUST00000113707 St13Q99L47 371 aaKnown RBP26.8■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Lpin3Q99PI4 848 aa26.8■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Tspan17Q9D7W4 270 aa26.8■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Bmp15Q9Z0L4 392 aa26.8■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Gm10717D3Z1I8 228 aa26.79■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Cyp2b23E9Q593 491 aa26.79■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Gm13128L7MU96 475 aa26.79■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Shoc2O88520 582 aaKnown RBP26.79■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Nrp1P97333 923 aa26.79■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Rplp2P99027 115 aaKnown RBP26.79■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Nsun2Q1HFZ0 757 aaKnown RBP26.79■■□□□ 1.88
Tpm1-216ENSMUST00000113707 FaxcQ3UMF9 409 aa26.79■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Rad9bQ6WBX7 403 aa26.79■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Nipal4Q8BZF2 406 aa26.79■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Slfn5Q8CBA2 884 aa26.79■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Prrg2Q8R182 198 aa26.79■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Vmn1r65Q9EPS7 332 aa26.79■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Dock1Q8BUR4 1865 aa26.79■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Arhgap42B2RQE8 841 aa26.79■■□□□ 1.88
Tpm1-216ENSMUST00000113707 JrklB2RRL2 523 aa26.79■■□□□ 1.88
Tpm1-216ENSMUST00000113707 A930018M24RikB7ZMY3 218 aa26.79■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Akap1O08715 857 aaKnown RBP26.79■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Sypl2O89104 264 aa26.79■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Wee1P47810 646 aa26.79■■□□□ 1.88
Tpm1-216ENSMUST00000113707 FpgsP48760 587 aa26.79■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Rpl22P67984 128 aaKnown RBP26.79■■□□□ 1.88
Tpm1-216ENSMUST00000113707 TankP70347 448 aa26.79■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Olfr8Q60892 310 aa26.79■■□□□ 1.88
Tpm1-216ENSMUST00000113707 PrkciQ62074 595 aaKnown RBP26.79■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Ldhal6bQ8BVP2 382 aa26.79■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Prkag2Q91WG5 566 aa26.79■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Sh3d19Q91X43 789 aa26.79■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Vwa7Q9JHA8 891 aa26.79■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Galk1Q9R0N0 392 aa26.79■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Itga11P61622 1188 aa26.78■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Syce2Q505B8 171 aa26.78■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Mapre1Q61166 268 aaKnown RBP26.78■■□□□ 1.88
Tpm1-216ENSMUST00000113707 DazlQ64368 298 aaKnown RBP26.78■■□□□ 1.88
Tpm1-216ENSMUST00000113707 MyorgQ69ZQ1 716 aa26.78■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Tas2r102Q7M717 329 aa26.78■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Zic5Q7TQ40 622 aa26.78■■□□□ 1.88
Tpm1-216ENSMUST00000113707 1700001K19RikQ80ZT1 219 aa26.78■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Fam155aQ8CCS2 467 aa26.78■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Lims2Q91XD2 341 aa26.78■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Oxct2bQ9ESL0 520 aa26.78■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Oxct2aQ9JJN4 520 aa26.78■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Dock3Q8CIQ7 2027 aa26.78■■□□□ 1.88
Tpm1-216ENSMUST00000113707 4930402K13RikB1AW18 415 aa26.77■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Ccdc170D3YXL0 722 aa26.77■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Vmn2r100E9QAZ9 850 aa26.77■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Rnf19aP50636 840 aa26.77■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Dynlt1P51807 113 aa26.77■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Irx1P81068 480 aa26.77■■□□□ 1.88
Tpm1-216ENSMUST00000113707 DsppP97399 934 aa26.77■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Tmem237Q3V0J1 427 aa26.77■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Itga1Q3V3R4 1179 aa26.77■■□□□ 1.88
Tpm1-216ENSMUST00000113707 PterQ60866 349 aa26.77■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Wnk4Q80UE6 1222 aa26.77■■□□□ 1.88
Tpm1-216ENSMUST00000113707 L3mbtl3Q8BLB7 883 aa26.77■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Dusp21Q9D9D8 189 aa26.77■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Gm11983V9GXS8 105 aa26.77■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Iqcj-Schip1A0A088MLT8 559 aa26.76■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Gm21293E9Q4G9 266 aa26.76■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Schip1P0DPB4 484 aa26.76■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Stxbp5lQ5DQR4 1185 aa26.76■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Tmc8Q7TN58 722 aa26.76■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Ccdc159Q8C963 411 aa26.76■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Ccdc65Q8VHI7 493 aa26.76■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Dcp2Q9CYC6 422 aa26.76■■□□□ 1.88
Tpm1-216ENSMUST00000113707 NbnQ9R207 751 aa26.76■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Phf2Q9WTU0 1096 aa26.76■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Snx1Q9WV80 522 aa26.76■■□□□ 1.88
Tpm1-216ENSMUST00000113707 Znf106O88466 1888 aa26.76■■□□□ 1.87
Tpm1-216ENSMUST00000113707 Gm36028A0A0U1RPM1 299 aa26.76■■□□□ 1.87
Tpm1-216ENSMUST00000113707 Ccdc24E9PUW8 296 aa26.76■■□□□ 1.87
Tpm1-216ENSMUST00000113707 FynP39688 537 aa26.76■■□□□ 1.87
Tpm1-216ENSMUST00000113707 Kcnj6P48542 425 aa26.76■■□□□ 1.87
Tpm1-216ENSMUST00000113707 Rrp36Q3UFY0 244 aaKnown RBP26.76■■□□□ 1.87
Tpm1-216ENSMUST00000113707 Clul1Q3ZRW6 464 aa26.76■■□□□ 1.87
Tpm1-216ENSMUST00000113707 Crhr2Q60748 411 aa26.76■■□□□ 1.87
Tpm1-216ENSMUST00000113707 Nlrp14Q6B966 993 aa26.76■■□□□ 1.87
Tpm1-216ENSMUST00000113707 Ube2q1Q7TSS2 422 aa26.76■■□□□ 1.87
Tpm1-216ENSMUST00000113707 Baiap3Q80TT2 1134 aa26.76■■□□□ 1.87
Tpm1-216ENSMUST00000113707 Armc12Q80X86 340 aa26.76■■□□□ 1.87
Tpm1-216ENSMUST00000113707 Metap1Q8BP48 386 aaKnown RBP26.76■■□□□ 1.87
Tpm1-216ENSMUST00000113707 SgczQ8BX51 311 aa26.76■■□□□ 1.87
Tpm1-216ENSMUST00000113707 Vwa1Q8R2Z5 415 aa26.76■■□□□ 1.87
Tpm1-216ENSMUST00000113707 Itgbl1Q8VDV0 494 aa26.76■■□□□ 1.87
Tpm1-216ENSMUST00000113707 PrccQ9EQC8 491 aaKnown RBP26.76■■□□□ 1.87
Tpm1-216ENSMUST00000113707 Magel2Q9QZ04 1284 aa26.76■■□□□ 1.87
Tpm1-216ENSMUST00000113707 Epm2aQ9WUA5 330 aa26.76■■□□□ 1.87
Tpm1-216ENSMUST00000113707 Nlrc5C3VPR6 1915 aa26.76■■□□□ 1.87
Tpm1-216ENSMUST00000113707 Ccnyl1D3YUJ3 367 aa26.75■■□□□ 1.87
Retrieved 100 of 22,080 RNA–protein pairs in 25.5 ms