RNA–Protein interactions for RNA: YPR013C

CMR3, Transcript of Putative zinc finger protein, yeast

Gene CMR3, Length 954 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMR3	YPR013C	BCK1	Q01389	1478 aa		0.82	□□□□□ -2.28
CMR3	YPR013C	YOR008C-A	Q3E7B9	74 aa		0.79	□□□□□ -2.28
CMR3	YPR013C	YOL166W-A	Q8TGJ1	51 aa		0.79	□□□□□ -2.28
CMR3	YPR013C	YMR001C-A	Q8TGS9	76 aa		0.78	□□□□□ -2.28
CMR3	YPR013C	YLR157W-D	P0CE99	70 aa		0.73	□□□□□ -2.29
CMR3	YPR013C	FIG2	P25653	1609 aa		0.73	□□□□□ -2.29
CMR3	YPR013C	YBR230W-A	Q3E762	66 aa		0.71	□□□□□ -2.3
CMR3	YPR013C	FLO1	P32768	1537 aa		0.7	□□□□□ -2.3
CMR3	YPR013C	TOS6	P48560	102 aa		0.7	□□□□□ -2.3
CMR3	YPR013C	SMX2	P40204	77 aa	Known RBP	0.68	□□□□□ -2.3
CMR3	YPR013C	RPS27B	P38711	82 aa		0.67	□□□□□ -2.3
CMR3	YPR013C	RPS29A	P41057	56 aa	Known RBP	0.63	□□□□□ -2.31
CMR3	YPR013C	UTP20	P35194	2493 aa	Known RBP	0.62	□□□□□ -2.31
CMR3	YPR013C	YKL023C-A	Q2V2P3	75 aa		0.6	□□□□□ -2.31
CMR3	YPR013C	YGR146C-A	Q8TGT9	53 aa		0.58	□□□□□ -2.32
CMR3	YPR013C	COA2	Q3E823	68 aa		0.56	□□□□□ -2.32
CMR3	YPR013C	COX9	P07255	59 aa		0.55	□□□□□ -2.32
CMR3	YPR013C	YOR192C-C	Q3E736	78 aa		0.55	□□□□□ -2.32
CMR3	YPR013C	TOM7	P53507	60 aa		0.52	□□□□□ -2.33
CMR3	YPR013C	NCE101	Q02820	53 aa		0.51	□□□□□ -2.33
CMR3	YPR013C	YDR524C-B	Q3E6R4	66 aa		0.5	□□□□□ -2.33
CMR3	YPR013C	YIL046W-A	Q3E7Z4	54 aa		0.5	□□□□□ -2.33
CMR3	YPR013C	YGL258W-A	Q3E740	77 aa		0.49	□□□□□ -2.33
CMR3	YPR013C	YLR342W-A	Q3E810	57 aa		0.49	□□□□□ -2.33
CMR3	YPR013C	RPL39	P04650	51 aa		0.48	□□□□□ -2.33
CMR3	YPR013C	YLL006W-A	Q3E814	58 aa		0.47	□□□□□ -2.33
CMR3	YPR013C	YMR105W-A	Q8TGS8	64 aa		0.47	□□□□□ -2.33
CMR3	YPR013C	TOR1	P35169	2470 aa		0.46	□□□□□ -2.34
CMR3	YPR013C	YPR010C-A	A5Z2X5	72 aa		0.45	□□□□□ -2.34
CMR3	YPR013C	RPL29	P05747	59 aa	Predicted RBP	0.44	□□□□□ -2.34
CMR3	YPR013C	YJL133C-A	Q3E7A3	74 aa		0.44	□□□□□ -2.34
CMR3	YPR013C	YDR034W-B	Q6Q5X2	51 aa		0.44	□□□□□ -2.34
CMR3	YPR013C	PMP3	P87284	55 aa		0.43	□□□□□ -2.34
CMR3	YPR013C	HOR7	Q05827	59 aa		0.43	□□□□□ -2.34
CMR3	YPR013C	YJL127C-B	Q3E828	52 aa		0.43	□□□□□ -2.34
CMR3	YPR013C	YBR056W-A	I2HB52	66 aa		0.42	□□□□□ -2.34
CMR3	YPR013C	DDR2	P89113	61 aa		0.42	□□□□□ -2.34
CMR3	YPR013C	YLL066W-B	Q8TGJ7	56 aa		0.41	□□□□□ -2.34
CMR3	YPR013C	Q0297	Q9ZZV8	51 aa		0.41	□□□□□ -2.34
CMR3	YPR013C	YHR073W-A	P0C5N7	58 aa		0.39	□□□□□ -2.35
CMR3	YPR013C	YOR316C-A	Q3E806	69 aa		0.39	□□□□□ -2.35
CMR3	YPR013C	YDR034C-A	P0C289	58 aa		0.36	□□□□□ -2.35
CMR3	YPR013C	TOM1	Q03280	3268 aa		0.34	□□□□□ -2.36
CMR3	YPR013C	YOR072W-B	Q3E832	53 aa		0.33	□□□□□ -2.36
CMR3	YPR013C	YPR117W	Q06116	2489 aa		0.33	□□□□□ -2.36
CMR3	YPR013C	IRA2	P19158	3079 aa		0.33	□□□□□ -2.36
CMR3	YPR013C	VPS13	Q07878	3144 aa		0.31	□□□□□ -2.36
CMR3	YPR013C	CSF1	Q12150	2958 aa		0.31	□□□□□ -2.36
CMR3	YPR013C	CUP1-1	P0CX80	61 aa		0.31	□□□□□ -2.36
CMR3	YPR013C	CUP1-2	P0CX81	61 aa		0.31	□□□□□ -2.36
CMR3	YPR013C	FMP27	Q06179	2628 aa		0.3	□□□□□ -2.36
CMR3	YPR013C	IRA1	P18963	3092 aa		0.29	□□□□□ -2.36
CMR3	YPR013C	YML054C-A	Q3E809	52 aa		0.28	□□□□□ -2.36
CMR3	YPR013C	Q0017	Q9ZZX8	53 aa		0.28	□□□□□ -2.36
CMR3	YPR013C	TOR2	P32600	2474 aa	Known RBP	0.27	□□□□□ -2.37
CMR3	YPR013C	GCN1	P33892	2672 aa	Known RBP	0.27	□□□□□ -2.37
CMR3	YPR013C	YHR050W-A	Q05451	56 aa		0.25	□□□□□ -2.37
CMR3	YPR013C	TRA1	P38811	3744 aa		0.25	□□□□□ -2.37
CMR3	YPR013C	NUM1	Q00402	2748 aa		0.25	□□□□□ -2.37
CMR3	YPR013C	TEL1	P38110	2787 aa		0.24	□□□□□ -2.37
CMR3	YPR013C	MEC1	P38111	2368 aa		0.24	□□□□□ -2.37
CMR3	YPR013C	DYN1	P36022	4092 aa		0.13	□□□□□ -2.39
CMR3	YPR013C	MDN1	Q12019	4910 aa	Known RBP	0.11	□□□□□ -2.39

Retrieved 63 of 5,963 RNA–protein pairs in 10.1 ms