RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeastyeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP100YPL174C YBL039W-BP0C268 59 aa-0.79□□□□□ -2.54
NIP100YPL174C OLI1P61829 76 aa-0.79□□□□□ -2.54
NIP100YPL174C YLR099W-AQ3E798 87 aa-0.79□□□□□ -2.54
NIP100YPL174C RPB11P38902 120 aa-0.79□□□□□ -2.54
NIP100YPL174C TOM7P53507 60 aa-0.79□□□□□ -2.54
NIP100YPL174C PMP3P87284 55 aa-0.8□□□□□ -2.54
NIP100YPL174C YPL225WQ08971 146 aaKnown RBP-0.8□□□□□ -2.54
NIP100YPL174C POC4Q12245 148 aaPredicted RBP-0.8□□□□□ -2.54
NIP100YPL174C TIM12P32830 109 aa-0.8□□□□□ -2.54
NIP100YPL174C YOS1Q3E834 85 aa-0.81□□□□□ -2.54
NIP100YPL174C MRP49P32388 137 aa-0.81□□□□□ -2.54
NIP100YPL174C YOR105WQ08504 108 aa-0.81□□□□□ -2.54
NIP100YPL174C RPL29P05747 59 aaPredicted RBP-0.82□□□□□ -2.54
NIP100YPL174C YOR314WQ12506 109 aa-0.82□□□□□ -2.54
NIP100YPL174C SSS1P35179 80 aa-0.82□□□□□ -2.54
NIP100YPL174C DYN2Q02647 92 aa-0.82□□□□□ -2.54
NIP100YPL174C SNU13P39990 126 aaKnown RBP-0.83□□□□□ -2.54
NIP100YPL174C YMR090WQ04304 227 aaKnown RBP-0.83□□□□□ -2.54
NIP100YPL174C SWM2P40342 146 aa-0.84□□□□□ -2.54
NIP100YPL174C YOL097W-AQ3E7Y9 61 aa-0.84□□□□□ -2.54
NIP100YPL174C MHF2Q3E829 80 aa-0.84□□□□□ -2.54
NIP100YPL174C HUB1Q6Q546 73 aa-0.84□□□□□ -2.54
NIP100YPL174C NKP2Q06162 153 aa-0.85□□□□□ -2.54
NIP100YPL174C SWC7Q06707 132 aa-0.85□□□□□ -2.54
NIP100YPL174C VMA21P41806 77 aa-0.85□□□□□ -2.55
NIP100YPL174C SPI1P40092 148 aa-0.85□□□□□ -2.55
NIP100YPL174C MSL1P40567 111 aaPredicted RBP-0.85□□□□□ -2.55
NIP100YPL174C QCR6P00127 147 aa-0.86□□□□□ -2.55
NIP100YPL174C YLR157W-DP0CE99 70 aa-0.86□□□□□ -2.55
NIP100YPL174C YMR175W-AQ3E766 64 aa-0.86□□□□□ -2.55
NIP100YPL174C YER137CP40083 148 aaKnown RBP-0.86□□□□□ -2.55
NIP100YPL174C YOL131WQ08270 108 aa-0.86□□□□□ -2.55
NIP100YPL174C YOR011W-AQ3E807 68 aa-0.86□□□□□ -2.55
NIP100YPL174C COX9P07255 59 aa-0.87□□□□□ -2.55
NIP100YPL174C LSM2P38203 95 aaKnown RBP-0.88□□□□□ -2.55
NIP100YPL174C CWP2P43497 92 aa-0.88□□□□□ -2.55
NIP100YPL174C YKL065W-AQ2V2P2 73 aa-0.88□□□□□ -2.55
NIP100YPL174C YKL023C-AQ2V2P3 75 aa-0.89□□□□□ -2.55
NIP100YPL174C YOR316C-AQ3E806 69 aa-0.89□□□□□ -2.55
NIP100YPL174C SUS1Q6WNK7 96 aa-0.89□□□□□ -2.55
NIP100YPL174C QCR9P22289 66 aa-0.9□□□□□ -2.55
NIP100YPL174C YGL194C-AQ2V2P6 80 aa-0.9□□□□□ -2.55
NIP100YPL174C VMA7P39111 118 aa-0.9□□□□□ -2.55
NIP100YPL174C PAU7P39545 55 aa-0.9□□□□□ -2.55
NIP100YPL174C RPS12P48589 143 aaKnown RBP-0.91□□□□□ -2.55
NIP100YPL174C RPL39P04650 51 aa-0.91□□□□□ -2.56
NIP100YPL174C YOR304C-AO14468 76 aa-0.92□□□□□ -2.56
NIP100YPL174C YBR230W-AQ3E762 66 aa-0.92□□□□□ -2.56
NIP100YPL174C YCL001W-BQ96VH2 84 aa-0.92□□□□□ -2.56
NIP100YPL174C YJL133C-AQ3E7A3 74 aa-0.93□□□□□ -2.56
NIP100YPL174C YOL166W-AQ8TGJ1 51 aa-0.94□□□□□ -2.56
NIP100YPL174C NCE101Q02820 53 aa-0.95□□□□□ -2.56
NIP100YPL174C ZEO1Q08245 113 aa-0.96□□□□□ -2.56
NIP100YPL174C DDR2P89113 61 aa-0.97□□□□□ -2.56
NIP100YPL174C YSY6P38374 65 aa-0.99□□□□□ -2.57
NIP100YPL174C YFL041W-AQ3E817 63 aa-1.01□□□□□ -2.57
NIP100YPL174C YLR342W-AQ3E810 57 aa-1.02□□□□□ -2.57
NIP100YPL174C YJL127C-BQ3E828 52 aa-1.02□□□□□ -2.57
NIP100YPL174C YIL102C-AQ2V2P5 75 aa-1.03□□□□□ -2.58
NIP100YPL174C YHR213W-AQ8TGT4 77 aa-1.07□□□□□ -2.58
NIP100YPL174C PAI3P01094 68 aa-1.09□□□□□ -2.58
NIP100YPL174C SMX2P40204 77 aaKnown RBP-1.13□□□□□ -2.59
NIP100YPL174C VMA9Q3E7B6 73 aa-1.17□□□□□ -2.6
Retrieved 63 of 5,963 RNA–protein pairs in 10.9 ms