RNA–Protein interactions for RNA: YPL002C

SNF8, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene SNF8, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF8YPL002C YDL022C-AP0C5L6 82 aa2.43□□□□□ -2.02
SNF8YPL002C YBR219CP38317 127 aa2.43□□□□□ -2.02
SNF8YPL002C YEL008WP40001 126 aa2.43□□□□□ -2.02
SNF8YPL002C YNL190WP53872 204 aa2.43□□□□□ -2.02
SNF8YPL002C YJL144WP47009 104 aa2.42□□□□□ -2.02
SNF8YPL002C YJR146WP47174 117 aa2.42□□□□□ -2.02
SNF8YPL002C ATP17Q06405 101 aa2.42□□□□□ -2.02
SNF8YPL002C YHR007C-AQ07074 71 aa2.42□□□□□ -2.02
SNF8YPL002C YOR008C-AQ3E7B9 74 aa2.42□□□□□ -2.02
SNF8YPL002C YOL166W-AQ8TGJ1 51 aa2.41□□□□□ -2.02
SNF8YPL002C YDR210WQ03482 75 aa2.39□□□□□ -2.03
SNF8YPL002C YNL122CP53921 115 aaPredicted RBP2.38□□□□□ -2.03
SNF8YPL002C YBL039W-BP0C268 59 aa2.37□□□□□ -2.03
SNF8YPL002C MRPS12P53732 153 aa2.37□□□□□ -2.03
SNF8YPL002C MVB12P42939 101 aa2.36□□□□□ -2.03
SNF8YPL002C SHU1P38751 150 aa2.35□□□□□ -2.03
SNF8YPL002C YIL102CP40488 101 aa2.35□□□□□ -2.03
SNF8YPL002C TOS6P48560 102 aa2.35□□□□□ -2.03
SNF8YPL002C MGR2Q02889 113 aa2.34□□□□□ -2.03
SNF8YPL002C YLR157W-DP0CE99 70 aa2.33□□□□□ -2.04
SNF8YPL002C RPL38P49167 78 aaKnown RBP2.33□□□□□ -2.04
SNF8YPL002C YBR201C-AQ2V2Q3 67 aa2.33□□□□□ -2.04
SNF8YPL002C SDH6Q3E785 79 aa2.33□□□□□ -2.04
SNF8YPL002C YMR001C-AQ8TGS9 76 aa2.33□□□□□ -2.04
SNF8YPL002C YJR107C-AP0CT86 78 aa2.32□□□□□ -2.04
SNF8YPL002C ATP18P81450 59 aa2.32□□□□□ -2.04
SNF8YPL002C DDR2P89113 61 aa2.32□□□□□ -2.04
SNF8YPL002C YOL097W-AQ3E7Y9 61 aa2.32□□□□□ -2.04
SNF8YPL002C YLR255CO13574 117 aa2.3□□□□□ -2.04
SNF8YPL002C RPL37BP51402 88 aaKnown RBP2.3□□□□□ -2.04
SNF8YPL002C RPL29P05747 59 aaPredicted RBP2.27□□□□□ -2.05
SNF8YPL002C YLL006W-AQ3E814 58 aa2.26□□□□□ -2.05
SNF8YPL002C COX7P10174 60 aa2.24□□□□□ -2.05
SNF8YPL002C YJL009WP47078 108 aa2.24□□□□□ -2.05
SNF8YPL002C YOL013W-AP0C272 63 aaPredicted RBP2.22□□□□□ -2.05
SNF8YPL002C YJL127C-BQ3E828 52 aa2.22□□□□□ -2.05
SNF8YPL002C YOR072WQ08486 104 aa2.21□□□□□ -2.06
SNF8YPL002C YFR009W-AP0C5M9 85 aa2.2□□□□□ -2.06
SNF8YPL002C YBR230W-AQ3E762 66 aa2.2□□□□□ -2.06
SNF8YPL002C YJR128WP47162 119 aa2.17□□□□□ -2.06
SNF8YPL002C OLI1P61829 76 aa2.14□□□□□ -2.07
SNF8YPL002C YOR394C-AQ8TGJ0 55 aa2.14□□□□□ -2.07
SNF8YPL002C Q0017Q9ZZX8 53 aa2.14□□□□□ -2.07
SNF8YPL002C YHR213W-BQ8TGK1 99 aa2.1□□□□□ -2.07
SNF8YPL002C RPS29AP41057 56 aaKnown RBP2.09□□□□□ -2.07
SNF8YPL002C YJL133C-AQ3E7A3 74 aa2.09□□□□□ -2.07
SNF8YPL002C YAR064WP39563 99 aa2.07□□□□□ -2.08
SNF8YPL002C RPS29BP41058 56 aaKnown RBP2.06□□□□□ -2.08
SNF8YPL002C HHY1P39982 102 aa2.05□□□□□ -2.08
SNF8YPL002C YHR086W-AQ3E746 53 aa2.04□□□□□ -2.08
SNF8YPL002C YBR072C-AQ3E794 53 aa2.04□□□□□ -2.08
SNF8YPL002C YBL044WP38194 122 aa2.03□□□□□ -2.08
SNF8YPL002C YCR108CQ3E819 63 aa1.99□□□□□ -2.09
SNF8YPL002C YGR146C-AQ8TGT9 53 aa1.97□□□□□ -2.09
SNF8YPL002C YHR073W-AP0C5N7 58 aa1.94□□□□□ -2.1
SNF8YPL002C YBR016WP38216 128 aa1.92□□□□□ -2.1
SNF8YPL002C YOR316C-AQ3E806 69 aa1.88□□□□□ -2.11
SNF8YPL002C YML054C-AQ3E809 52 aa1.87□□□□□ -2.11
SNF8YPL002C YOL164W-AQ3E7A5 60 aa1.83□□□□□ -2.12
SNF8YPL002C YOR072W-BQ3E832 53 aa1.8□□□□□ -2.12
SNF8YPL002C RPL37AP49166 88 aaKnown RBP1.75□□□□□ -2.13
SNF8YPL002C YLR157W-EP0CF00 54 aa1.74□□□□□ -2.13
SNF8YPL002C YHR050W-AQ05451 56 aa1.38□□□□□ -2.19
Retrieved 63 of 5,963 RNA–protein pairs in 92.4 ms