RNA–Protein interactions for RNA: YOR276W

CAF20, Transcript of Phosphoprotein of the mRNA cap-binding complex, yeast

Gene CAF20, Length 486 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF20	YOR276W	FIG2	P25653	1609 aa		0.35	□□□□□ -2.35
CAF20	YOR276W	RPS27B	P38711	82 aa		0.34	□□□□□ -2.36
CAF20	YOR276W	YSY6	P38374	65 aa		0.33	□□□□□ -2.36
CAF20	YOR276W	YFR010W-A	P0C5N0	62 aa		0.32	□□□□□ -2.36
CAF20	YOR276W	YDR182W-A	Q3E796	67 aa		0.32	□□□□□ -2.36
CAF20	YOR276W	Q0297	Q9ZZV8	51 aa		0.32	□□□□□ -2.36
CAF20	YOR276W	YOR008C-A	Q3E7B9	74 aa		0.31	□□□□□ -2.36
CAF20	YOR276W	RPL39	P04650	51 aa		0.3	□□□□□ -2.36
CAF20	YOR276W	RPS30A	P0CX33	63 aa	Known RBP	0.3	□□□□□ -2.36
CAF20	YOR276W	RPS30B	P0CX34	63 aa	Known RBP	0.3	□□□□□ -2.36
CAF20	YOR276W	NCE101	Q02820	53 aa		0.3	□□□□□ -2.36
CAF20	YOR276W	YOL131W	Q08270	108 aa		0.29	□□□□□ -2.36
CAF20	YOR276W	YIL102C-A	Q2V2P5	75 aa		0.29	□□□□□ -2.36
CAF20	YOR276W	YMR001C-A	Q8TGS9	76 aa		0.29	□□□□□ -2.36
CAF20	YOR276W	TOM1	Q03280	3268 aa		0.28	□□□□□ -2.36
CAF20	YOR276W	SMX2	P40204	77 aa	Known RBP	0.28	□□□□□ -2.36
CAF20	YOR276W	YMR105W-A	Q8TGS8	64 aa		0.28	□□□□□ -2.36
CAF20	YOR276W	UTP20	P35194	2493 aa	Known RBP	0.27	□□□□□ -2.37
CAF20	YOR276W	YPR117W	Q06116	2489 aa		0.27	□□□□□ -2.37
CAF20	YOR276W	HOR7	Q05827	59 aa		0.27	□□□□□ -2.37
CAF20	YOR276W	YOR192C-C	Q3E736	78 aa		0.26	□□□□□ -2.37
CAF20	YOR276W	TOS6	P48560	102 aa		0.25	□□□□□ -2.37
CAF20	YOR276W	YDR034C-A	P0C289	58 aa		0.24	□□□□□ -2.37
CAF20	YOR276W	RPS29A	P41057	56 aa	Known RBP	0.24	□□□□□ -2.37
CAF20	YOR276W	TOM7	P53507	60 aa		0.24	□□□□□ -2.37
CAF20	YOR276W	COX9	P07255	59 aa		0.23	□□□□□ -2.37
CAF20	YOR276W	YGL258W-A	Q3E740	77 aa		0.23	□□□□□ -2.37
CAF20	YOR276W	YLR157W-D	P0CE99	70 aa		0.22	□□□□□ -2.37
CAF20	YOR276W	PMP3	P87284	55 aa		0.22	□□□□□ -2.37
CAF20	YOR276W	YLL066W-B	Q8TGJ7	56 aa		0.22	□□□□□ -2.37
CAF20	YOR276W	YBR230W-A	Q3E762	66 aa		0.21	□□□□□ -2.38
CAF20	YOR276W	COA2	Q3E823	68 aa		0.21	□□□□□ -2.38
CAF20	YOR276W	YOL166W-A	Q8TGJ1	51 aa		0.21	□□□□□ -2.38
CAF20	YOR276W	TOR2	P32600	2474 aa	Known RBP	0.21	□□□□□ -2.38
CAF20	YOR276W	YPR010C-A	A5Z2X5	72 aa		0.2	□□□□□ -2.38
CAF20	YOR276W	YLR342W-A	Q3E810	57 aa		0.2	□□□□□ -2.38
CAF20	YOR276W	VPS13	Q07878	3144 aa		0.19	□□□□□ -2.38
CAF20	YOR276W	DDR2	P89113	61 aa		0.19	□□□□□ -2.38
CAF20	YOR276W	VMA9	Q3E7B6	73 aa		0.19	□□□□□ -2.38
CAF20	YOR276W	TOR1	P35169	2470 aa		0.19	□□□□□ -2.38
CAF20	YOR276W	MEC1	P38111	2368 aa		0.18	□□□□□ -2.38
CAF20	YOR276W	YKL023C-A	Q2V2P3	75 aa		0.17	□□□□□ -2.38
CAF20	YOR276W	YLL006W-A	Q3E814	58 aa		0.17	□□□□□ -2.38
CAF20	YOR276W	YJL127C-B	Q3E828	52 aa		0.17	□□□□□ -2.38
CAF20	YOR276W	Q0017	Q9ZZX8	53 aa		0.17	□□□□□ -2.38
CAF20	YOR276W	RPL29	P05747	59 aa	Predicted RBP	0.16	□□□□□ -2.38
CAF20	YOR276W	YGR146C-A	Q8TGT9	53 aa		0.16	□□□□□ -2.38
CAF20	YOR276W	YHR073W-A	P0C5N7	58 aa		0.15	□□□□□ -2.39
CAF20	YOR276W	FMP27	Q06179	2628 aa		0.15	□□□□□ -2.39
CAF20	YOR276W	IRA1	P18963	3092 aa		0.15	□□□□□ -2.39
CAF20	YOR276W	YJL133C-A	Q3E7A3	74 aa		0.14	□□□□□ -2.39
CAF20	YOR276W	YML054C-A	Q3E809	52 aa		0.14	□□□□□ -2.39
CAF20	YOR276W	YOR316C-A	Q3E806	69 aa		0.13	□□□□□ -2.39
CAF20	YOR276W	IRA2	P19158	3079 aa		0.12	□□□□□ -2.39
CAF20	YOR276W	TRA1	P38811	3744 aa		0.11	□□□□□ -2.39
CAF20	YOR276W	GCN1	P33892	2672 aa	Known RBP	0.1	□□□□□ -2.39
CAF20	YOR276W	YOR072W-B	Q3E832	53 aa		0.1	□□□□□ -2.39
CAF20	YOR276W	CSF1	Q12150	2958 aa		0.1	□□□□□ -2.39
CAF20	YOR276W	NUM1	Q00402	2748 aa		0.1	□□□□□ -2.39
CAF20	YOR276W	DYN1	P36022	4092 aa		0.1	□□□□□ -2.39
CAF20	YOR276W	YHR050W-A	Q05451	56 aa		0.09	□□□□□ -2.4
CAF20	YOR276W	TEL1	P38110	2787 aa		0.09	□□□□□ -2.4
CAF20	YOR276W	MDN1	Q12019	4910 aa	Known RBP	0.06	□□□□□ -2.4

Retrieved 63 of 5,963 RNA–protein pairs in 10.1 ms