RNA–Protein interactions for RNA: YOL148C

SPT20, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT20, Length 1,815 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT20YOL148C YOL097W-AQ3E7Y9 61 aa6.25□□□□□ -1.41
SPT20YOL148C YNL122CP53921 115 aaPredicted RBP6.24□□□□□ -1.41
SPT20YOL148C LCL2Q08045 131 aa6.24□□□□□ -1.41
SPT20YOL148C MRX7P53869 86 aa6.2□□□□□ -1.42
SPT20YOL148C DDR48P18899 430 aaKnown RBP6.18□□□□□ -1.42
SPT20YOL148C YER175W-AQ8TGU4 54 aa6.16□□□□□ -1.42
SPT20YOL148C YJR128WP47162 119 aa6.15□□□□□ -1.42
SPT20YOL148C YBR201C-AQ2V2Q3 67 aa6.15□□□□□ -1.43
SPT20YOL148C YGR146C-AQ8TGT9 53 aa6.13□□□□□ -1.43
SPT20YOL148C RPL43AP0CX25 92 aaKnown RBP6.11□□□□□ -1.43
SPT20YOL148C RPL43BP0CX26 92 aa6.11□□□□□ -1.43
SPT20YOL148C UTP20P35194 2493 aaKnown RBP6.11□□□□□ -1.43
SPT20YOL148C YLR255CO13574 117 aa6.11□□□□□ -1.43
SPT20YOL148C QCR10P37299 77 aa6.11□□□□□ -1.43
SPT20YOL148C YJR085CP47131 105 aaKnown RBP6.09□□□□□ -1.43
SPT20YOL148C YLR122CQ12312 125 aa6.09□□□□□ -1.43
SPT20YOL148C YBL008W-AQ3E821 79 aa6.09□□□□□ -1.43
SPT20YOL148C YDR034C-AP0C289 58 aa6.09□□□□□ -1.44
SPT20YOL148C YHR073W-AP0C5N7 58 aa6.07□□□□□ -1.44
SPT20YOL148C COX8P04039 78 aa6.06□□□□□ -1.44
SPT20YOL148C TEL1P38110 2787 aa6.05□□□□□ -1.44
SPT20YOL148C MEC1P38111 2368 aa6.02□□□□□ -1.45
SPT20YOL148C YGL014C-AP0C5N1 53 aa6.01□□□□□ -1.45
SPT20YOL148C YOR316C-AQ3E806 69 aa6□□□□□ -1.45
SPT20YOL148C FYV12Q08559 129 aa5.97□□□□□ -1.45
SPT20YOL148C OLI1P61829 76 aa5.95□□□□□ -1.46
SPT20YOL148C SOM1Q05676 74 aa5.95□□□□□ -1.46
SPT20YOL148C YPR195CQ06594 109 aa5.93□□□□□ -1.46
SPT20YOL148C RPL37BP51402 88 aaKnown RBP5.9□□□□□ -1.46
SPT20YOL148C YCL042WP25572 119 aa5.89□□□□□ -1.47
SPT20YOL148C YBR016WP38216 128 aa5.86□□□□□ -1.47
SPT20YOL148C YEL014CP39999 101 aa5.86□□□□□ -1.47
SPT20YOL148C LCL1Q02786 101 aa5.83□□□□□ -1.48
SPT20YOL148C YJL144WP47009 104 aa5.78□□□□□ -1.48
SPT20YOL148C YOR394C-AQ8TGJ0 55 aa5.72□□□□□ -1.49
SPT20YOL148C COX7P10174 60 aa5.71□□□□□ -1.49
SPT20YOL148C YCR108CQ3E819 63 aa5.7□□□□□ -1.5
SPT20YOL148C YBL044WP38194 122 aa5.68□□□□□ -1.5
SPT20YOL148C TOR1P35169 2470 aa5.64□□□□□ -1.51
SPT20YOL148C NUM1Q00402 2748 aa5.64□□□□□ -1.51
SPT20YOL148C YDR210WQ03482 75 aa5.6□□□□□ -1.51
SPT20YOL148C DYN1P36022 4092 aa5.46□□□□□ -1.53
SPT20YOL148C YFL067WP43537 175 aa5.43□□□□□ -1.54
SPT20YOL148C RPL37AP49166 88 aaKnown RBP5.35□□□□□ -1.55
SPT20YOL148C CUP1-1P0CX80 61 aa5.34□□□□□ -1.55
SPT20YOL148C CUP1-2P0CX81 61 aa5.34□□□□□ -1.55
SPT20YOL148C CMC4Q3E7A9 73 aa5.28□□□□□ -1.56
SPT20YOL148C YER078W-AQ3E7A2 54 aa5.25□□□□□ -1.57
SPT20YOL148C YOR072W-BQ3E832 53 aa5.25□□□□□ -1.57
SPT20YOL148C YBR072C-AQ3E794 53 aa5.24□□□□□ -1.57
SPT20YOL148C HHY1P39982 102 aa5.2□□□□□ -1.58
SPT20YOL148C YML054C-AQ3E809 52 aa5.11□□□□□ -1.59
SPT20YOL148C YJL009WP47078 108 aa5.08□□□□□ -1.6
SPT20YOL148C Q0017Q9ZZX8 53 aa5.06□□□□□ -1.6
SPT20YOL148C YHR032W-AP0C5N6 59 aa4.83□□□□□ -1.64
SPT20YOL148C YAL067W-AQ8TGK6 75 aa4.79□□□□□ -1.64
SPT20YOL148C YOL164W-AQ3E7A5 60 aa4.35□□□□□ -1.71
SPT20YOL148C MDN1Q12019 4910 aaKnown RBP4.18□□□□□ -1.74
SPT20YOL148C YHR050W-AQ05451 56 aa4.16□□□□□ -1.74
SPT20YOL148C RPS29AP41057 56 aaKnown RBP3.76□□□□□ -1.81
SPT20YOL148C YHR086W-AQ3E746 53 aa3.73□□□□□ -1.81
SPT20YOL148C YLR157W-EP0CF00 54 aa3.67□□□□□ -1.82
SPT20YOL148C RPS29BP41058 56 aaKnown RBP3.65□□□□□ -1.82
Retrieved 63 of 5,963 RNA–protein pairs in 10.4 ms