RNA–Protein interactions for RNA: YMR247C

RKR1, Transcript of RING domain E3 ubiquitin ligase, yeastyeast

Gene RKR1, Length 4,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RKR1YMR247C ATP18P81450 59 aa0.23□□□□□ -2.37
RKR1YMR247C YIL156W-BQ2V2P4 73 aa0.23□□□□□ -2.37
RKR1YMR247C YBR201C-AQ2V2Q3 67 aa0.23□□□□□ -2.37
RKR1YMR247C YLR146W-AQ2V2P1 62 aa0.23□□□□□ -2.37
RKR1YMR247C YPR108W-AQ3E7B3 70 aa0.22□□□□□ -2.37
RKR1YMR247C SIP18P50263 79 aa0.22□□□□□ -2.37
RKR1YMR247C NOP10Q6Q547 58 aaPredicted RBP0.22□□□□□ -2.37
RKR1YMR247C YMR122W-AQ3E842 84 aa0.21□□□□□ -2.38
RKR1YMR247C UTP20P35194 2493 aaKnown RBP0.21□□□□□ -2.38
RKR1YMR247C CWP2P43497 92 aa0.21□□□□□ -2.38
RKR1YMR247C SPC1P46965 94 aa0.21□□□□□ -2.38
RKR1YMR247C YBR200W-AQ3E755 54 aa0.21□□□□□ -2.38
RKR1YMR247C YBL044WP38194 122 aa0.2□□□□□ -2.38
RKR1YMR247C CSF1Q12150 2958 aa0.2□□□□□ -2.38
RKR1YMR247C YBR230W-AQ3E762 66 aa0.19□□□□□ -2.38
RKR1YMR247C YCR108CQ3E819 63 aa0.19□□□□□ -2.38
RKR1YMR247C RPS30AP0CX33 63 aaKnown RBP0.18□□□□□ -2.38
RKR1YMR247C RPS30BP0CX34 63 aaKnown RBP0.18□□□□□ -2.38
RKR1YMR247C YLR342W-AQ3E810 57 aa0.18□□□□□ -2.38
RKR1YMR247C YHR073W-AP0C5N7 58 aa0.18□□□□□ -2.38
RKR1YMR247C RPS29AP41057 56 aaKnown RBP0.18□□□□□ -2.38
RKR1YMR247C HUB1Q6Q546 73 aa0.18□□□□□ -2.38
RKR1YMR247C PAU7P39545 55 aa0.17□□□□□ -2.38
RKR1YMR247C YOR394C-AQ8TGJ0 55 aa0.17□□□□□ -2.38
RKR1YMR247C YDR524C-BQ3E6R4 66 aa0.17□□□□□ -2.38
RKR1YMR247C TOR1P35169 2470 aa0.17□□□□□ -2.38
RKR1YMR247C YPR010C-AA5Z2X5 72 aa0.16□□□□□ -2.38
RKR1YMR247C YGL258W-AQ3E740 77 aa0.16□□□□□ -2.38
RKR1YMR247C YOR032W-AQ8TGS1 66 aa0.15□□□□□ -2.39
RKR1YMR247C YOR192C-CQ3E736 78 aa0.14□□□□□ -2.39
RKR1YMR247C DDR2P89113 61 aa0.14□□□□□ -2.39
RKR1YMR247C YHR050W-AQ05451 56 aa0.13□□□□□ -2.39
RKR1YMR247C YGR146C-AQ8TGT9 53 aa0.13□□□□□ -2.39
RKR1YMR247C BPH1P25356 2167 aa0.13□□□□□ -2.39
RKR1YMR247C YBL039W-BP0C268 59 aa0.12□□□□□ -2.39
RKR1YMR247C HOR7Q05827 59 aa0.12□□□□□ -2.39
RKR1YMR247C YOR316C-AQ3E806 69 aa0.12□□□□□ -2.39
RKR1YMR247C YOR072W-BQ3E832 53 aa0.1□□□□□ -2.39
RKR1YMR247C YLL066W-BQ8TGJ7 56 aa0.1□□□□□ -2.39
RKR1YMR247C YLL006W-AQ3E814 58 aa0.09□□□□□ -2.4
RKR1YMR247C YLR157W-DP0CE99 70 aa0.08□□□□□ -2.4
RKR1YMR247C YIL046W-AQ3E7Z4 54 aa0.08□□□□□ -2.4
RKR1YMR247C TOM7P53507 60 aa0.08□□□□□ -2.4
RKR1YMR247C MEC1P38111 2368 aa0.07□□□□□ -2.4
RKR1YMR247C YPR117WQ06116 2489 aa0.07□□□□□ -2.4
RKR1YMR247C NCE101Q02820 53 aa0.07□□□□□ -2.4
RKR1YMR247C CUP1-1P0CX80 61 aa0.07□□□□□ -2.4
RKR1YMR247C CUP1-2P0CX81 61 aa0.07□□□□□ -2.4
RKR1YMR247C YJL133C-AQ3E7A3 74 aa0.07□□□□□ -2.4
RKR1YMR247C YJL127C-BQ3E828 52 aa0.03□□□□□ -2.4
RKR1YMR247C TOR2P32600 2474 aaKnown RBP0.03□□□□□ -2.41
RKR1YMR247C YMR105W-AQ8TGS8 64 aa0.02□□□□□ -2.41
RKR1YMR247C YML054C-AQ3E809 52 aa0.01□□□□□ -2.41
RKR1YMR247C YDR034C-AP0C289 58 aa0.01□□□□□ -2.41
RKR1YMR247C NUM1Q00402 2748 aa0□□□□□ -2.41
RKR1YMR247C Q0017Q9ZZX8 53 aa-0.01□□□□□ -2.41
RKR1YMR247C PMP3P87284 55 aa-0.05□□□□□ -2.42
RKR1YMR247C TEL1P38110 2787 aa-0.08□□□□□ -2.42
RKR1YMR247C FMP27Q06179 2628 aa-0.1□□□□□ -2.42
RKR1YMR247C GCN1P33892 2672 aaKnown RBP-0.11□□□□□ -2.43
RKR1YMR247C Q0297Q9ZZV8 51 aa-0.12□□□□□ -2.43
RKR1YMR247C RPL39P04650 51 aa-0.13□□□□□ -2.43
RKR1YMR247C YDR034W-BQ6Q5X2 51 aa-0.16□□□□□ -2.43
Retrieved 63 of 5,963 RNA–protein pairs in 34.5 ms