RNA–Protein interactions for RNA: YLR272C

YCS4, Transcript of Subunit of the condensin complex, yeast

Gene YCS4, Length 3,531 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCS4	YLR272C	YHR213W-B	Q8TGK1	99 aa		0.44	□□□□□ -2.34
YCS4	YLR272C	RSM18	P40033	138 aa		0.44	□□□□□ -2.34
YCS4	YLR272C	YFL065C	P43539	102 aa		0.44	□□□□□ -2.34
YCS4	YLR272C	LCL2	Q08045	131 aa		0.44	□□□□□ -2.34
YCS4	YLR272C	YPR203W	Q08994	102 aa		0.44	□□□□□ -2.34
YCS4	YLR272C	MRX7	P53869	86 aa		0.44	□□□□□ -2.34
YCS4	YLR272C	YOL013W-A	P0C272	63 aa	Predicted RBP	0.43	□□□□□ -2.34
YCS4	YLR272C	YGL014C-A	P0C5N1	53 aa		0.43	□□□□□ -2.34
YCS4	YLR272C	HFA1	P32874	2273 aa		0.43	□□□□□ -2.34
YCS4	YLR272C	RUB1	Q03919	77 aa		0.43	□□□□□ -2.34
YCS4	YLR272C	YLR285C-A	Q3E771	56 aa		0.43	□□□□□ -2.34
YCS4	YLR272C	YGR146C-A	Q8TGT9	53 aa		0.43	□□□□□ -2.34
YCS4	YLR272C	SEC16	P48415	2195 aa	Known RBP	0.43	□□□□□ -2.34
YCS4	YLR272C	ATP17	Q06405	101 aa		0.43	□□□□□ -2.34
YCS4	YLR272C	OLI1	P61829	76 aa		0.42	□□□□□ -2.34
YCS4	YLR272C	DYN1	P36022	4092 aa		0.42	□□□□□ -2.34
YCS4	YLR272C	YDR246W-A	Q3E763	66 aa		0.42	□□□□□ -2.34
YCS4	YLR272C	YOL166W-A	Q8TGJ1	51 aa		0.42	□□□□□ -2.34
YCS4	YLR272C	YBR016W	P38216	128 aa		0.41	□□□□□ -2.34
YCS4	YLR272C	RPL38	P49167	78 aa	Known RBP	0.41	□□□□□ -2.34
YCS4	YLR272C	YGL149W	P53116	101 aa		0.41	□□□□□ -2.34
YCS4	YLR272C	YIL156W-B	Q2V2P4	73 aa		0.41	□□□□□ -2.34
YCS4	YLR272C	YBR201C-A	Q2V2Q3	67 aa		0.41	□□□□□ -2.34
YCS4	YLR272C	RRT15	Q3E811	62 aa		0.41	□□□□□ -2.34
YCS4	YLR272C	YMR001C-A	Q8TGS9	76 aa		0.41	□□□□□ -2.34
YCS4	YLR272C	YPR117W	Q06116	2489 aa		0.41	□□□□□ -2.34
YCS4	YLR272C	URA2	P07259	2214 aa	Known RBP	0.41	□□□□□ -2.34
YCS4	YLR272C	YER188C-A	P0C0V2	99 aa		0.41	□□□□□ -2.34
YCS4	YLR272C	YDR010C	Q12426	110 aa		0.4	□□□□□ -2.35
YCS4	YLR272C	NOP10	Q6Q547	58 aa	Predicted RBP	0.4	□□□□□ -2.35
YCS4	YLR272C	RPS30A	P0CX33	63 aa	Known RBP	0.4	□□□□□ -2.35
YCS4	YLR272C	RPS30B	P0CX34	63 aa	Known RBP	0.4	□□□□□ -2.35
YCS4	YLR272C	YOR072W-B	Q3E832	53 aa		0.4	□□□□□ -2.35
YCS4	YLR272C	YBR072C-A	Q3E794	53 aa		0.39	□□□□□ -2.35
YCS4	YLR272C	YOR034C-A	Q3E735	80 aa		0.39	□□□□□ -2.35
YCS4	YLR272C	YCR095W-A	Q3E787	52 aa		0.39	□□□□□ -2.35
YCS4	YLR272C	YJR128W	P47162	119 aa		0.39	□□□□□ -2.35
YCS4	YLR272C	YOR394C-A	Q8TGJ0	55 aa		0.39	□□□□□ -2.35
YCS4	YLR272C	RPS29B	P41058	56 aa	Known RBP	0.38	□□□□□ -2.35
YCS4	YLR272C	BPH1	P25356	2167 aa		0.38	□□□□□ -2.35
YCS4	YLR272C	RPS29A	P41057	56 aa	Known RBP	0.37	□□□□□ -2.35
YCS4	YLR272C	YOR376W-A	Q3E805	51 aa		0.35	□□□□□ -2.35
YCS4	YLR272C	FMP27	Q06179	2628 aa		0.35	□□□□□ -2.35
YCS4	YLR272C	TOR2	P32600	2474 aa	Known RBP	0.35	□□□□□ -2.35
YCS4	YLR272C	GCN1	P33892	2672 aa	Known RBP	0.35	□□□□□ -2.35
YCS4	YLR272C	MEC1	P38111	2368 aa		0.35	□□□□□ -2.35
YCS4	YLR272C	YBL044W	P38194	122 aa		0.34	□□□□□ -2.35
YCS4	YLR272C	YHR050W-A	Q05451	56 aa		0.34	□□□□□ -2.35
YCS4	YLR272C	PRP8	P33334	2413 aa	Known RBP	0.34	□□□□□ -2.35
YCS4	YLR272C	TOR1	P35169	2470 aa		0.33	□□□□□ -2.36
YCS4	YLR272C	HHY1	P39982	102 aa		0.33	□□□□□ -2.36
YCS4	YLR272C	YCR108C	Q3E819	63 aa		0.32	□□□□□ -2.36
YCS4	YLR272C	TEL1	P38110	2787 aa		0.29	□□□□□ -2.36
YCS4	YLR272C	UTP20	P35194	2493 aa	Known RBP	0.28	□□□□□ -2.37
YCS4	YLR272C	NUM1	Q00402	2748 aa		0.25	□□□□□ -2.37
YCS4	YLR272C	YLR157W-E	P0CF00	54 aa		0.24	□□□□□ -2.37
YCS4	YLR272C	CSF1	Q12150	2958 aa		0.23	□□□□□ -2.37
YCS4	YLR272C	YOL164W-A	Q3E7A5	60 aa		0.23	□□□□□ -2.37
YCS4	YLR272C	IRA1	P18963	3092 aa		0.19	□□□□□ -2.38
YCS4	YLR272C	IRA2	P19158	3079 aa		0.19	□□□□□ -2.38
YCS4	YLR272C	VPS13	Q07878	3144 aa		0.18	□□□□□ -2.38
YCS4	YLR272C	TRA1	P38811	3744 aa		0.17	□□□□□ -2.38
YCS4	YLR272C	TOM1	Q03280	3268 aa		0.14	□□□□□ -2.39

Retrieved 63 of 5,963 RNA–protein pairs in 11.3 ms