RNA–Protein interactions for RNA: YLR260W

LCB5, Transcript of Minor sphingoid long-chain base kinase, yeastyeast

Gene LCB5, Length 2,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB5YLR260W MRPS12P53732 153 aa2.18□□□□□ -2.06
LCB5YLR260W TOS6P48560 102 aa2.17□□□□□ -2.06
LCB5YLR260W YDR182W-AQ3E796 67 aa2.17□□□□□ -2.06
LCB5YLR260W YOR008C-AQ3E7B9 74 aa2.17□□□□□ -2.06
LCB5YLR260W YLR307C-AQ3E825 87 aa2.16□□□□□ -2.06
LCB5YLR260W YGL041C-BQ3E750 60 aa2.15□□□□□ -2.07
LCB5YLR260W YPR010C-AA5Z2X5 72 aa2.14□□□□□ -2.07
LCB5YLR260W RPC10P40422 70 aa2.14□□□□□ -2.07
LCB5YLR260W YLR255CO13574 117 aa2.13□□□□□ -2.07
LCB5YLR260W SHU1P38751 150 aa2.11□□□□□ -2.07
LCB5YLR260W LCL1Q02786 101 aa2.11□□□□□ -2.07
LCB5YLR260W AQY2P0CD90 149 aa2.1□□□□□ -2.07
LCB5YLR260W ATP17Q06405 101 aa2.1□□□□□ -2.07
LCB5YLR260W YHR086W-AQ3E746 53 aa2.1□□□□□ -2.07
LCB5YLR260W YJR107C-AP0CT86 78 aa2.06□□□□□ -2.08
LCB5YLR260W YNL122CP53921 115 aaPredicted RBP2.06□□□□□ -2.08
LCB5YLR260W HUB1Q6Q546 73 aa2.06□□□□□ -2.08
LCB5YLR260W RPL38P49167 78 aaKnown RBP2.06□□□□□ -2.08
LCB5YLR260W YBR201C-AQ2V2Q3 67 aa2.06□□□□□ -2.08
LCB5YLR260W YLL006W-AQ3E814 58 aa2.05□□□□□ -2.08
LCB5YLR260W MVB12P42939 101 aa2.04□□□□□ -2.08
LCB5YLR260W YJL009WP47078 108 aa2.04□□□□□ -2.08
LCB5YLR260W YDL012CQ12489 107 aa2.04□□□□□ -2.08
LCB5YLR260W YMR001C-AQ8TGS9 76 aa2.03□□□□□ -2.08
LCB5YLR260W YLR157W-DP0CE99 70 aa2.02□□□□□ -2.09
LCB5YLR260W ATP18P81450 59 aa2.02□□□□□ -2.09
LCB5YLR260W Q0032Q9ZZX7 96 aa2.02□□□□□ -2.09
LCB5YLR260W YBL039W-BP0C268 59 aa2.02□□□□□ -2.09
LCB5YLR260W YIL102CP40488 101 aa2.02□□□□□ -2.09
LCB5YLR260W YFR009W-AP0C5M9 85 aa2.01□□□□□ -2.09
LCB5YLR260W SDH6Q3E785 79 aa2□□□□□ -2.09
LCB5YLR260W YOR072WQ08486 104 aa1.99□□□□□ -2.09
LCB5YLR260W RPL29P05747 59 aaPredicted RBP1.98□□□□□ -2.09
LCB5YLR260W YOL013W-AP0C272 63 aaPredicted RBP1.96□□□□□ -2.1
LCB5YLR260W YHR213W-BQ8TGK1 99 aa1.96□□□□□ -2.1
LCB5YLR260W DDR2P89113 61 aa1.95□□□□□ -2.1
LCB5YLR260W YBR230W-AQ3E762 66 aa1.95□□□□□ -2.1
LCB5YLR260W YJL127C-BQ3E828 52 aa1.95□□□□□ -2.1
LCB5YLR260W YJR128WP47162 119 aa1.94□□□□□ -2.1
LCB5YLR260W YOL097W-AQ3E7Y9 61 aa1.94□□□□□ -2.1
LCB5YLR260W YJL133C-AQ3E7A3 74 aa1.94□□□□□ -2.1
LCB5YLR260W YAR064WP39563 99 aa1.93□□□□□ -2.1
LCB5YLR260W COX7P10174 60 aa1.89□□□□□ -2.11
LCB5YLR260W RPL37BP51402 88 aaKnown RBP1.87□□□□□ -2.11
LCB5YLR260W YOR394C-AQ8TGJ0 55 aa1.86□□□□□ -2.11
LCB5YLR260W HHY1P39982 102 aa1.83□□□□□ -2.12
LCB5YLR260W YCR108CQ3E819 63 aa1.78□□□□□ -2.12
LCB5YLR260W YBR072C-AQ3E794 53 aa1.78□□□□□ -2.13
LCB5YLR260W OLI1P61829 76 aa1.75□□□□□ -2.13
LCB5YLR260W YGR146C-AQ8TGT9 53 aa1.75□□□□□ -2.13
LCB5YLR260W YBL044WP38194 122 aa1.74□□□□□ -2.13
LCB5YLR260W YOR316C-AQ3E806 69 aa1.73□□□□□ -2.13
LCB5YLR260W YHR073W-AP0C5N7 58 aa1.7□□□□□ -2.14
LCB5YLR260W YBR016WP38216 128 aa1.7□□□□□ -2.14
LCB5YLR260W Q0017Q9ZZX8 53 aa1.64□□□□□ -2.15
LCB5YLR260W YLR157W-EP0CF00 54 aa1.59□□□□□ -2.16
LCB5YLR260W YOL164W-AQ3E7A5 60 aa1.58□□□□□ -2.16
LCB5YLR260W RPL37AP49166 88 aaKnown RBP1.56□□□□□ -2.16
LCB5YLR260W RPS29BP41058 56 aaKnown RBP1.46□□□□□ -2.18
LCB5YLR260W YML054C-AQ3E809 52 aa1.46□□□□□ -2.18
LCB5YLR260W YOR072W-BQ3E832 53 aa1.46□□□□□ -2.18
LCB5YLR260W RPS29AP41057 56 aaKnown RBP1.45□□□□□ -2.18
LCB5YLR260W YHR050W-AQ05451 56 aa1.14□□□□□ -2.23
Retrieved 63 of 5,963 RNA–protein pairs in 6.6 ms