RNA–Protein interactions for RNA: YLR087C

CSF1, Transcript of Protein required for fermentation at low temperature, yeastyeast

Gene CSF1, Length 8,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSF1YLR087C RPS30BP0CX34 63 aaKnown RBP1.54□□□□□ -2.16
CSF1YLR087C YJL127C-BQ3E828 52 aa1.53□□□□□ -2.16
CSF1YLR087C YBR201C-AQ2V2Q3 67 aa1.53□□□□□ -2.16
CSF1YLR087C YDR210WQ03482 75 aa1.53□□□□□ -2.16
CSF1YLR087C YPR195CQ06594 109 aa1.53□□□□□ -2.16
CSF1YLR087C YDL012CQ12489 107 aa1.53□□□□□ -2.16
CSF1YLR087C AUA1P32450 94 aa1.52□□□□□ -2.17
CSF1YLR087C TEL1P38110 2787 aa1.52□□□□□ -2.17
CSF1YLR087C YMR105W-AQ8TGS8 64 aa1.52□□□□□ -2.17
CSF1YLR087C YDR010CQ12426 110 aa1.51□□□□□ -2.17
CSF1YLR087C YJL133C-AQ3E7A3 74 aa1.51□□□□□ -2.17
CSF1YLR087C YJL144WP47009 104 aa1.5□□□□□ -2.17
CSF1YLR087C Q0017Q9ZZX8 53 aa1.49□□□□□ -2.17
CSF1YLR087C SGF11Q03067 99 aa1.48□□□□□ -2.17
CSF1YLR087C HHY1P39982 102 aa1.48□□□□□ -2.17
CSF1YLR087C ATP15P21306 62 aa1.48□□□□□ -2.17
CSF1YLR087C YER084WP40057 128 aa1.48□□□□□ -2.17
CSF1YLR087C RPS27BP38711 82 aa1.47□□□□□ -2.17
CSF1YLR087C YAL067W-AQ8TGK6 75 aa1.46□□□□□ -2.18
CSF1YLR087C YGL260WP53056 76 aa1.44□□□□□ -2.18
CSF1YLR087C YOR192C-CQ3E736 78 aa1.44□□□□□ -2.18
CSF1YLR087C RPS27AP35997 82 aaKnown RBP1.44□□□□□ -2.18
CSF1YLR087C RPS29AP41057 56 aaKnown RBP1.43□□□□□ -2.18
CSF1YLR087C YBR016WP38216 128 aa1.43□□□□□ -2.18
CSF1YLR087C RPL37AP49166 88 aaKnown RBP1.42□□□□□ -2.18
CSF1YLR087C YIL156W-BQ2V2P4 73 aa1.41□□□□□ -2.18
CSF1YLR087C TOM7P53507 60 aa1.4□□□□□ -2.18
CSF1YLR087C YER078W-AQ3E7A2 54 aa1.39□□□□□ -2.19
CSF1YLR087C YJR128WP47162 119 aa1.39□□□□□ -2.19
CSF1YLR087C YLL066W-BQ8TGJ7 56 aa1.39□□□□□ -2.19
CSF1YLR087C YOL085CQ99345 113 aa1.38□□□□□ -2.19
CSF1YLR087C RRT15Q3E811 62 aa1.37□□□□□ -2.19
CSF1YLR087C YDR034C-AP0C289 58 aa1.37□□□□□ -2.19
CSF1YLR087C YOR376W-AQ3E805 51 aa1.37□□□□□ -2.19
CSF1YLR087C TAR1Q8TGM6 124 aa1.34□□□□□ -2.19
CSF1YLR087C YIL046W-AQ3E7Z4 54 aa1.34□□□□□ -2.2
CSF1YLR087C RPS29BP41058 56 aaKnown RBP1.32□□□□□ -2.2
CSF1YLR087C YCL042WP25572 119 aa1.31□□□□□ -2.2
CSF1YLR087C YBL044WP38194 122 aa1.29□□□□□ -2.2
CSF1YLR087C YDR034W-BQ6Q5X2 51 aa1.29□□□□□ -2.2
CSF1YLR087C GIS2P53849 153 aaKnown RBP RIP-Chip data1.28□□□□□ -2.2 RIP-Chip
CSF1YLR087C CMC4Q3E7A9 73 aa1.28□□□□□ -2.2
CSF1YLR087C YHR050W-AQ05451 56 aa1.26□□□□□ -2.21
CSF1YLR087C YHR212W-AP0CX91 67 aa1.25□□□□□ -2.21
CSF1YLR087C YOR034C-AQ3E735 80 aa1.24□□□□□ -2.21
CSF1YLR087C YHR086W-AQ3E746 53 aa1.23□□□□□ -2.21
CSF1YLR087C RPL39P04650 51 aa1.21□□□□□ -2.22
CSF1YLR087C YCR108CQ3E819 63 aa1.21□□□□□ -2.22
CSF1YLR087C HUA1P40325 198 aa1.2□□□□□ -2.22
CSF1YLR087C TOM1Q03280 3268 aa1.18□□□□□ -2.22
CSF1YLR087C DYN1P36022 4092 aa1.14□□□□□ -2.23
CSF1YLR087C YBR056W-AI2HB52 66 aa1.14□□□□□ -2.23
CSF1YLR087C Q0297Q9ZZV8 51 aa1.14□□□□□ -2.23
CSF1YLR087C CSF1Q12150 2958 aa1.13□□□□□ -2.23
CSF1YLR087C TRA1P38811 3744 aa1.11□□□□□ -2.23
CSF1YLR087C CUP1-1P0CX80 61 aa1.07□□□□□ -2.24
CSF1YLR087C CUP1-2P0CX81 61 aa1.07□□□□□ -2.24
CSF1YLR087C YLR157W-EP0CF00 54 aa1.03□□□□□ -2.24
CSF1YLR087C IRA2P19158 3079 aa1□□□□□ -2.25
CSF1YLR087C YMR230W-AQ3E7B5 62 aa0.99□□□□□ -2.25
CSF1YLR087C YOL164W-AQ3E7A5 60 aa0.95□□□□□ -2.26
CSF1YLR087C IRA1P18963 3092 aa0.95□□□□□ -2.26
CSF1YLR087C VPS13Q07878 3144 aa0.89□□□□□ -2.27
Retrieved 63 of 5,963 RNA–protein pairs in 40.7 ms