RNA–Protein interactions for RNA: YKR098C

UBP11, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP11, Length 2,154 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP11YKR098C TOS6P48560 102 aa0.58□□□□□ -2.32
UBP11YKR098C YBR200W-AQ3E755 54 aa0.57□□□□□ -2.32
UBP11YKR098C YOR008C-AQ3E7B9 74 aa0.57□□□□□ -2.32
UBP11YKR098C RPC10P40422 70 aa0.56□□□□□ -2.32
UBP11YKR098C RPS29BP41058 56 aaKnown RBP0.56□□□□□ -2.32
UBP11YKR098C YGR025WP53216 100 aa0.56□□□□□ -2.32
UBP11YKR098C YOR011W-AQ3E807 68 aa0.56□□□□□ -2.32
UBP11YKR098C YLR342W-AQ3E810 57 aa0.56□□□□□ -2.32
UBP11YKR098C YOR394C-AQ8TGJ0 55 aa0.56□□□□□ -2.32
UBP11YKR098C YBL044WP38194 122 aa0.55□□□□□ -2.32
UBP11YKR098C SIP18P50263 79 aa0.55□□□□□ -2.32
UBP11YKR098C OLI1P61829 76 aa0.55□□□□□ -2.32
UBP11YKR098C YJL133C-AQ3E7A3 74 aa0.55□□□□□ -2.32
UBP11YKR098C TAO3P40468 2376 aa0.54□□□□□ -2.32
UBP11YKR098C RPS27AP35997 82 aaKnown RBP0.54□□□□□ -2.32
UBP11YKR098C YBR230W-AQ3E762 66 aa0.54□□□□□ -2.32
UBP11YKR098C YLL006W-AQ3E814 58 aa0.54□□□□□ -2.32
UBP11YKR098C YCR108CQ3E819 63 aa0.53□□□□□ -2.32
UBP11YKR098C RPS27BP38711 82 aa0.53□□□□□ -2.32
UBP11YKR098C YGL258W-AQ3E740 77 aa0.53□□□□□ -2.32
UBP11YKR098C FLO1P32768 1537 aa0.52□□□□□ -2.33
UBP11YKR098C YJL127C-BQ3E828 52 aa0.52□□□□□ -2.33
UBP11YKR098C DDR2P89113 61 aa0.51□□□□□ -2.33
UBP11YKR098C YGR146C-AQ8TGT9 53 aa0.51□□□□□ -2.33
UBP11YKR098C YBR016WP38216 128 aa0.5□□□□□ -2.33
UBP11YKR098C RPL29P05747 59 aaPredicted RBP0.5□□□□□ -2.33
UBP11YKR098C TOM1Q03280 3268 aa0.5□□□□□ -2.33
UBP11YKR098C NCE101Q02820 53 aa0.49□□□□□ -2.33
UBP11YKR098C PMP3P87284 55 aa0.49□□□□□ -2.33
UBP11YKR098C MEC1P38111 2368 aa0.48□□□□□ -2.33
UBP11YKR098C YOR316C-AQ3E806 69 aa0.47□□□□□ -2.33
UBP11YKR098C VPS13Q07878 3144 aa0.47□□□□□ -2.33
UBP11YKR098C IRA2P19158 3079 aa0.46□□□□□ -2.34
UBP11YKR098C YOR072W-BQ3E832 53 aa0.46□□□□□ -2.34
UBP11YKR098C YDR034C-AP0C289 58 aa0.45□□□□□ -2.34
UBP11YKR098C YHR073W-AP0C5N7 58 aa0.45□□□□□ -2.34
UBP11YKR098C HOR7Q05827 59 aa0.45□□□□□ -2.34
UBP11YKR098C IRA1P18963 3092 aa0.44□□□□□ -2.34
UBP11YKR098C RPL39P04650 51 aa0.44□□□□□ -2.34
UBP11YKR098C YMR105W-AQ8TGS8 64 aa0.43□□□□□ -2.34
UBP11YKR098C CSF1Q12150 2958 aa0.43□□□□□ -2.34
UBP11YKR098C YDR524C-BQ3E6R4 66 aa0.43□□□□□ -2.34
UBP11YKR098C TOR1P35169 2470 aa0.41□□□□□ -2.34
UBP11YKR098C UTP20P35194 2493 aaKnown RBP0.4□□□□□ -2.34
UBP11YKR098C GCN1P33892 2672 aaKnown RBP0.4□□□□□ -2.35
UBP11YKR098C TRA1P38811 3744 aa0.39□□□□□ -2.35
UBP11YKR098C YLL066W-BQ8TGJ7 56 aa0.38□□□□□ -2.35
UBP11YKR098C YIL046W-AQ3E7Z4 54 aa0.38□□□□□ -2.35
UBP11YKR098C NUM1Q00402 2748 aa0.37□□□□□ -2.35
UBP11YKR098C TOR2P32600 2474 aaKnown RBP0.36□□□□□ -2.35
UBP11YKR098C YPR117WQ06116 2489 aa0.36□□□□□ -2.35
UBP11YKR098C FMP27Q06179 2628 aa0.36□□□□□ -2.35
UBP11YKR098C YML054C-AQ3E809 52 aa0.36□□□□□ -2.35
UBP11YKR098C Q0017Q9ZZX8 53 aa0.35□□□□□ -2.35
UBP11YKR098C RPS29AP41057 56 aaKnown RBP0.35□□□□□ -2.35
UBP11YKR098C YHR050W-AQ05451 56 aa0.35□□□□□ -2.35
UBP11YKR098C TEL1P38110 2787 aa0.34□□□□□ -2.35
UBP11YKR098C Q0297Q9ZZV8 51 aa0.27□□□□□ -2.37
UBP11YKR098C DYN1P36022 4092 aa0.24□□□□□ -2.37
UBP11YKR098C CUP1-1P0CX80 61 aa0.21□□□□□ -2.38
UBP11YKR098C CUP1-2P0CX81 61 aa0.21□□□□□ -2.38
UBP11YKR098C YDR034W-BQ6Q5X2 51 aa0.14□□□□□ -2.39
UBP11YKR098C MDN1Q12019 4910 aaKnown RBP0.1□□□□□ -2.39
Retrieved 63 of 5,963 RNA–protein pairs in 40.8 ms