RNA–Protein interactions for RNA: YKR092C

SRP40, Transcript of Nucleolar serine-rich protein, yeastyeast

Gene SRP40, Length 1,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP40YKR092C TAR1Q8TGM6 124 aa2.57□□□□□ -2
SRP40YKR092C TOR2P32600 2474 aaKnown RBP2.56□□□□□ -2
SRP40YKR092C MVB12P42939 101 aa2.56□□□□□ -2
SRP40YKR092C GCN1P33892 2672 aaKnown RBP2.55□□□□□ -2
SRP40YKR092C YLR255CO13574 117 aa2.55□□□□□ -2
SRP40YKR092C IRA1P18963 3092 aa2.55□□□□□ -2
SRP40YKR092C COX7P10174 60 aa2.54□□□□□ -2
SRP40YKR092C TRA1P38811 3744 aa2.52□□□□□ -2.01
SRP40YKR092C RPL29P05747 59 aaPredicted RBP2.52□□□□□ -2.01
SRP40YKR092C YJL009WP47078 108 aa2.51□□□□□ -2.01
SRP40YKR092C YBR230W-AQ3E762 66 aa2.51□□□□□ -2.01
SRP40YKR092C YHR213W-BQ8TGK1 99 aa2.51□□□□□ -2.01
SRP40YKR092C URA2P07259 2214 aaKnown RBP2.51□□□□□ -2.01
SRP40YKR092C Q0297Q9ZZV8 51 aa2.5□□□□□ -2.01
SRP40YKR092C YHR212W-AP0CX91 67 aa2.49□□□□□ -2.01
SRP40YKR092C YOR072WQ08486 104 aa2.49□□□□□ -2.01
SRP40YKR092C YJL133C-AQ3E7A3 74 aa2.49□□□□□ -2.01
SRP40YKR092C AUA1P32450 94 aa2.48□□□□□ -2.01
SRP40YKR092C RPC10P40422 70 aa2.48□□□□□ -2.01
SRP40YKR092C OLI1P61829 76 aa2.48□□□□□ -2.01
SRP40YKR092C RDS3Q06835 107 aaPredicted RBP2.48□□□□□ -2.01
SRP40YKR092C YLR307C-AQ3E825 87 aa2.47□□□□□ -2.01
SRP40YKR092C YBR056W-AI2HB52 66 aa2.46□□□□□ -2.02
SRP40YKR092C YOR394C-AQ8TGJ0 55 aa2.46□□□□□ -2.02
SRP40YKR092C LCL1Q02786 101 aa2.45□□□□□ -2.02
SRP40YKR092C YJL127C-BQ3E828 52 aa2.45□□□□□ -2.02
SRP40YKR092C YAR064WP39563 99 aa2.44□□□□□ -2.02
SRP40YKR092C YJR128WP47162 119 aa2.44□□□□□ -2.02
SRP40YKR092C PRP8P33334 2413 aaKnown RBP2.44□□□□□ -2.02
SRP40YKR092C YCL042WP25572 119 aa2.42□□□□□ -2.02
SRP40YKR092C DDR2P89113 61 aa2.42□□□□□ -2.02
SRP40YKR092C MEC1P38111 2368 aa2.41□□□□□ -2.02
SRP40YKR092C TEL1P38110 2787 aa2.38□□□□□ -2.03
SRP40YKR092C RPL43AP0CX25 92 aaKnown RBP2.37□□□□□ -2.03
SRP40YKR092C RPL43BP0CX26 92 aa2.37□□□□□ -2.03
SRP40YKR092C YLL066W-BQ8TGJ7 56 aa2.37□□□□□ -2.03
SRP40YKR092C UTP20P35194 2493 aaKnown RBP2.35□□□□□ -2.03
SRP40YKR092C YBL044WP38194 122 aa2.35□□□□□ -2.03
SRP40YKR092C YBR072C-AQ3E794 53 aa2.32□□□□□ -2.04
SRP40YKR092C YGR146C-AQ8TGT9 53 aa2.32□□□□□ -2.04
SRP40YKR092C HHY1P39982 102 aa2.3□□□□□ -2.04
SRP40YKR092C TOR1P35169 2470 aa2.29□□□□□ -2.04
SRP40YKR092C YCR108CQ3E819 63 aa2.29□□□□□ -2.04
SRP40YKR092C RPL37BP51402 88 aaKnown RBP2.27□□□□□ -2.05
SRP40YKR092C YDR034C-AP0C289 58 aa2.26□□□□□ -2.05
SRP40YKR092C YOR316C-AQ3E806 69 aa2.24□□□□□ -2.05
SRP40YKR092C NUM1Q00402 2748 aa2.23□□□□□ -2.05
SRP40YKR092C YHR073W-AP0C5N7 58 aa2.21□□□□□ -2.06
SRP40YKR092C YBR016WP38216 128 aa2.21□□□□□ -2.06
SRP40YKR092C YHR086W-AQ3E746 53 aa2.18□□□□□ -2.06
SRP40YKR092C YOR072W-BQ3E832 53 aa2.14□□□□□ -2.07
SRP40YKR092C DYN1P36022 4092 aa2.13□□□□□ -2.07
SRP40YKR092C CUP1-1P0CX80 61 aa2.13□□□□□ -2.07
SRP40YKR092C CUP1-2P0CX81 61 aa2.13□□□□□ -2.07
SRP40YKR092C RPL37AP49166 88 aaKnown RBP2.07□□□□□ -2.08
SRP40YKR092C YOL164W-AQ3E7A5 60 aa2.04□□□□□ -2.08
SRP40YKR092C YLR157W-EP0CF00 54 aa1.92□□□□□ -2.1
SRP40YKR092C YML054C-AQ3E809 52 aa1.88□□□□□ -2.11
SRP40YKR092C Q0017Q9ZZX8 53 aa1.87□□□□□ -2.11
SRP40YKR092C MDN1Q12019 4910 aaKnown RBP1.72□□□□□ -2.13
SRP40YKR092C RPS29BP41058 56 aaKnown RBP1.69□□□□□ -2.14
SRP40YKR092C YHR050W-AQ05451 56 aa1.67□□□□□ -2.14
SRP40YKR092C RPS29AP41057 56 aaKnown RBP1.66□□□□□ -2.14
Retrieved 63 of 5,963 RNA–protein pairs in 6.5 ms