RNA–Protein interactions for RNA: YKR077W

MSA2, Transcript of Putative transcriptional activator, yeastyeast

Gene MSA2, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSA2YKR077W HIR3P47171 1648 aa0.61□□□□□ -2.31
MSA2YKR077W SIP18P50263 79 aa0.61□□□□□ -2.31
MSA2YKR077W MLP2P40457 1679 aa0.6□□□□□ -2.31
MSA2YKR077W RPS29BP41058 56 aaKnown RBP0.59□□□□□ -2.31
MSA2YKR077W YCR108CQ3E819 63 aa0.59□□□□□ -2.31
MSA2YKR077W FIG2P25653 1609 aa0.59□□□□□ -2.32
MSA2YKR077W CHC1P22137 1653 aaKnown RBP0.59□□□□□ -2.32
MSA2YKR077W SMX2P40204 77 aaKnown RBP0.58□□□□□ -2.32
MSA2YKR077W ATG2P53855 1592 aa0.57□□□□□ -2.32
MSA2YKR077W YGR146C-AQ8TGT9 53 aa0.57□□□□□ -2.32
MSA2YKR077W TOS6P48560 102 aa0.56□□□□□ -2.32
MSA2YKR077W YOR008C-AQ3E7B9 74 aa0.56□□□□□ -2.32
MSA2YKR077W TAO3P40468 2376 aa0.54□□□□□ -2.32
MSA2YKR077W GCN2P15442 1659 aa0.51□□□□□ -2.33
MSA2YKR077W YLL006W-AQ3E814 58 aa0.49□□□□□ -2.33
MSA2YKR077W YDR524C-BQ3E6R4 66 aa0.48□□□□□ -2.33
MSA2YKR077W YLR342W-AQ3E810 57 aa0.47□□□□□ -2.33
MSA2YKR077W COA2Q3E823 68 aa0.47□□□□□ -2.33
MSA2YKR077W YJL133C-AQ3E7A3 74 aa0.46□□□□□ -2.34
MSA2YKR077W YOR072W-BQ3E832 53 aa0.46□□□□□ -2.34
MSA2YKR077W YGL258W-AQ3E740 77 aa0.45□□□□□ -2.34
MSA2YKR077W COX9P07255 59 aa0.44□□□□□ -2.34
MSA2YKR077W DDR2P89113 61 aa0.44□□□□□ -2.34
MSA2YKR077W YOR316C-AQ3E806 69 aa0.44□□□□□ -2.34
MSA2YKR077W RPS29AP41057 56 aaKnown RBP0.43□□□□□ -2.34
MSA2YKR077W UTP20P35194 2493 aaKnown RBP0.4□□□□□ -2.35
MSA2YKR077W FLO1P32768 1537 aa0.4□□□□□ -2.35
MSA2YKR077W TOR1P35169 2470 aa0.4□□□□□ -2.35
MSA2YKR077W YDR034C-AP0C289 58 aa0.37□□□□□ -2.35
MSA2YKR077W TOM7P53507 60 aa0.37□□□□□ -2.35
MSA2YKR077W RPL29P05747 59 aaPredicted RBP0.36□□□□□ -2.35
MSA2YKR077W YJL127C-BQ3E828 52 aa0.36□□□□□ -2.35
MSA2YKR077W YHR073W-AP0C5N7 58 aa0.33□□□□□ -2.36
MSA2YKR077W YHR050W-AQ05451 56 aa0.31□□□□□ -2.36
MSA2YKR077W TOR2P32600 2474 aaKnown RBP0.27□□□□□ -2.37
MSA2YKR077W MEC1P38111 2368 aa0.25□□□□□ -2.37
MSA2YKR077W PMP3P87284 55 aa0.24□□□□□ -2.37
MSA2YKR077W Q0017Q9ZZX8 53 aa0.24□□□□□ -2.37
MSA2YKR077W HOR7Q05827 59 aa0.23□□□□□ -2.37
MSA2YKR077W YML054C-AQ3E809 52 aa0.23□□□□□ -2.37
MSA2YKR077W YPR117WQ06116 2489 aa0.23□□□□□ -2.37
MSA2YKR077W FMP27Q06179 2628 aa0.2□□□□□ -2.38
MSA2YKR077W NCE101Q02820 53 aa0.17□□□□□ -2.38
MSA2YKR077W DYN1P36022 4092 aa0.11□□□□□ -2.39
MSA2YKR077W GCN1P33892 2672 aaKnown RBP0.1□□□□□ -2.39
MSA2YKR077W YBR056W-AI2HB52 66 aa0.07□□□□□ -2.4
MSA2YKR077W CSF1Q12150 2958 aa0.06□□□□□ -2.4
MSA2YKR077W TEL1P38110 2787 aa0.06□□□□□ -2.4
MSA2YKR077W MDN1Q12019 4910 aaKnown RBP0.05□□□□□ -2.4
MSA2YKR077W YLL066W-BQ8TGJ7 56 aa0.05□□□□□ -2.4
MSA2YKR077W YMR105W-AQ8TGS8 64 aa0.03□□□□□ -2.4
MSA2YKR077W CUP1-1P0CX80 61 aa0.02□□□□□ -2.41
MSA2YKR077W CUP1-2P0CX81 61 aa0.02□□□□□ -2.41
MSA2YKR077W IRA1P18963 3092 aa0□□□□□ -2.41
MSA2YKR077W TRA1P38811 3744 aa-0.01□□□□□ -2.41
MSA2YKR077W RPL39P04650 51 aa-0.04□□□□□ -2.42
MSA2YKR077W NUM1Q00402 2748 aa-0.05□□□□□ -2.42
MSA2YKR077W IRA2P19158 3079 aa-0.09□□□□□ -2.42
MSA2YKR077W VPS13Q07878 3144 aa-0.11□□□□□ -2.43
MSA2YKR077W TOM1Q03280 3268 aa-0.2□□□□□ -2.44
MSA2YKR077W YIL046W-AQ3E7Z4 54 aa-0.2□□□□□ -2.44
MSA2YKR077W Q0297Q9ZZV8 51 aa-0.28□□□□□ -2.45
MSA2YKR077W YDR034W-BQ6Q5X2 51 aa-0.49□□□□□ -2.49
Retrieved 63 of 5,963 RNA–protein pairs in 20.1 ms