RNA–Protein interactions for RNA: YKL173W

SNU114, Transcript of GTPase component of U5 snRNP involved in mRNA splicing via spliceosome, yeastyeast

Gene SNU114, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU114YKL173W YMR001C-AQ8TGS9 76 aa1.25□□□□□ -2.21
SNU114YKL173W YJR128WP47162 119 aa1.25□□□□□ -2.21
SNU114YKL173W YPR108W-AQ3E7B3 70 aa1.25□□□□□ -2.21
SNU114YKL173W RPC10P40422 70 aa1.24□□□□□ -2.21
SNU114YKL173W YJL009WP47078 108 aa1.24□□□□□ -2.21
SNU114YKL173W YBL039W-BP0C268 59 aa1.24□□□□□ -2.21
SNU114YKL173W YJR107C-AP0CT86 78 aa1.24□□□□□ -2.21
SNU114YKL173W YHR212W-AP0CX91 67 aa1.24□□□□□ -2.21
SNU114YKL173W COX7P10174 60 aa1.23□□□□□ -2.21
SNU114YKL173W YOL097W-AQ3E7Y9 61 aa1.22□□□□□ -2.21
SNU114YKL173W YMR141CP40211 102 aa1.22□□□□□ -2.21
SNU114YKL173W YBR200W-AQ3E755 54 aa1.21□□□□□ -2.22
SNU114YKL173W HHY1P39982 102 aa1.2□□□□□ -2.22
SNU114YKL173W Q0297Q9ZZV8 51 aa1.19□□□□□ -2.22
SNU114YKL173W AUA1P32450 94 aa1.18□□□□□ -2.22
SNU114YKL173W HUA1P40325 198 aa1.18□□□□□ -2.22
SNU114YKL173W YAR064WP39563 99 aa1.18□□□□□ -2.22
SNU114YKL173W YPR010C-AA5Z2X5 72 aa1.17□□□□□ -2.22
SNU114YKL173W YOR011W-AQ3E807 68 aa1.16□□□□□ -2.22
SNU114YKL173W YOR394C-AQ8TGJ0 55 aa1.16□□□□□ -2.22
SNU114YKL173W NCE101Q02820 53 aa1.15□□□□□ -2.22
SNU114YKL173W COA2Q3E823 68 aa1.15□□□□□ -2.22
SNU114YKL173W SIP18P50263 79 aa1.15□□□□□ -2.23
SNU114YKL173W YGR025WP53216 100 aa1.14□□□□□ -2.23
SNU114YKL173W RPL39P04650 51 aa1.14□□□□□ -2.23
SNU114YKL173W OLI1P61829 76 aa1.14□□□□□ -2.23
SNU114YKL173W YBR072C-AQ3E794 53 aa1.14□□□□□ -2.23
SNU114YKL173W YFR009W-AP0C5M9 85 aa1.13□□□□□ -2.23
SNU114YKL173W YBL044WP38194 122 aa1.12□□□□□ -2.23
SNU114YKL173W TOS6P48560 102 aa1.11□□□□□ -2.23
SNU114YKL173W YHR213W-BQ8TGK1 99 aa1.11□□□□□ -2.23
SNU114YKL173W TOM7P53507 60 aa1.1□□□□□ -2.23
SNU114YKL173W YCR108CQ3E819 63 aa1.1□□□□□ -2.23
SNU114YKL173W YOL164W-AQ3E7A5 60 aa1.09□□□□□ -2.23
SNU114YKL173W YOR008C-AQ3E7B9 74 aa1.09□□□□□ -2.24
SNU114YKL173W YLR342W-AQ3E810 57 aa1.09□□□□□ -2.24
SNU114YKL173W YBR230W-AQ3E762 66 aa1.08□□□□□ -2.24
SNU114YKL173W YMR105W-AQ8TGS8 64 aa1.07□□□□□ -2.24
SNU114YKL173W COX9P07255 59 aa1.06□□□□□ -2.24
SNU114YKL173W YJL133C-AQ3E7A3 74 aa1.06□□□□□ -2.24
SNU114YKL173W YGR146C-AQ8TGT9 53 aa1.04□□□□□ -2.24
SNU114YKL173W YLR157W-EP0CF00 54 aa1.04□□□□□ -2.24
SNU114YKL173W YLR307C-AQ3E825 87 aa1.04□□□□□ -2.24
SNU114YKL173W HOR7Q05827 59 aa1.03□□□□□ -2.24
SNU114YKL173W YLL006W-AQ3E814 58 aa1.03□□□□□ -2.24
SNU114YKL173W YBR016WP38216 128 aa1.02□□□□□ -2.25
SNU114YKL173W RPL37AP49166 88 aaKnown RBP0.99□□□□□ -2.25
SNU114YKL173W RPL37BP51402 88 aaKnown RBP0.99□□□□□ -2.25
SNU114YKL173W DDR2P89113 61 aa0.97□□□□□ -2.25
SNU114YKL173W YJL127C-BQ3E828 52 aa0.97□□□□□ -2.25
SNU114YKL173W YGL258W-AQ3E740 77 aa0.95□□□□□ -2.26
SNU114YKL173W YDR034C-AP0C289 58 aa0.93□□□□□ -2.26
SNU114YKL173W YOR316C-AQ3E806 69 aa0.92□□□□□ -2.26
SNU114YKL173W RPL29P05747 59 aaPredicted RBP0.91□□□□□ -2.26
SNU114YKL173W YOR072W-BQ3E832 53 aa0.91□□□□□ -2.26
SNU114YKL173W PMP3P87284 55 aa0.88□□□□□ -2.27
SNU114YKL173W YLL066W-BQ8TGJ7 56 aa0.87□□□□□ -2.27
SNU114YKL173W YHR073W-AP0C5N7 58 aa0.81□□□□□ -2.28
SNU114YKL173W RPS29BP41058 56 aaKnown RBP0.81□□□□□ -2.28
SNU114YKL173W RPS29AP41057 56 aaKnown RBP0.69□□□□□ -2.3
SNU114YKL173W YML054C-AQ3E809 52 aa0.67□□□□□ -2.3
SNU114YKL173W YHR050W-AQ05451 56 aa0.66□□□□□ -2.3
SNU114YKL173W Q0017Q9ZZX8 53 aa0.65□□□□□ -2.3
Retrieved 63 of 5,963 RNA–protein pairs in 46 ms