RNA–Protein interactions for RNA: YKL062W

MSN4, Transcript of Stress-responsive transcriptional activator, yeastyeast

Gene MSN4, Length 1,893 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN4YKL062W RPS27BP38711 82 aa1.75□□□□□ -2.13
MSN4YKL062W YFR009W-AP0C5M9 85 aa1.74□□□□□ -2.13
MSN4YKL062W SEN1Q00416 2231 aaKnown RBP1.73□□□□□ -2.13
MSN4YKL062W YBL044WP38194 122 aa1.71□□□□□ -2.14
MSN4YKL062W YCR108CQ3E819 63 aa1.71□□□□□ -2.14
MSN4YKL062W TOS6P48560 102 aa1.69□□□□□ -2.14
MSN4YKL062W SIP18P50263 79 aa1.67□□□□□ -2.14
MSN4YKL062W GCN2P15442 1659 aa1.66□□□□□ -2.14
MSN4YKL062W RPL37BP51402 88 aaKnown RBP1.65□□□□□ -2.15
MSN4YKL062W YGR146C-AQ8TGT9 53 aa1.63□□□□□ -2.15
MSN4YKL062W PRP8P33334 2413 aaKnown RBP1.61□□□□□ -2.15
MSN4YKL062W COA2Q3E823 68 aa1.57□□□□□ -2.16
MSN4YKL062W YLR342W-AQ3E810 57 aa1.54□□□□□ -2.16
MSN4YKL062W YOR008C-AQ3E7B9 74 aa1.52□□□□□ -2.17
MSN4YKL062W YJL133C-AQ3E7A3 74 aa1.5□□□□□ -2.17
MSN4YKL062W TAO3P40468 2376 aa1.49□□□□□ -2.17
MSN4YKL062W RPS29BP41058 56 aaKnown RBP1.46□□□□□ -2.18
MSN4YKL062W TOM7P53507 60 aa1.43□□□□□ -2.18
MSN4YKL062W COX9P07255 59 aa1.42□□□□□ -2.18
MSN4YKL062W YLL006W-AQ3E814 58 aa1.41□□□□□ -2.18
MSN4YKL062W DDR2P89113 61 aa1.4□□□□□ -2.19
MSN4YKL062W YOR316C-AQ3E806 69 aa1.36□□□□□ -2.19
MSN4YKL062W YOR072W-BQ3E832 53 aa1.35□□□□□ -2.19
MSN4YKL062W YDR524C-BQ3E6R4 66 aa1.34□□□□□ -2.19
MSN4YKL062W YGL258W-AQ3E740 77 aa1.34□□□□□ -2.19
MSN4YKL062W RPL29P05747 59 aaPredicted RBP1.28□□□□□ -2.2
MSN4YKL062W YJL127C-BQ3E828 52 aa1.27□□□□□ -2.21
MSN4YKL062W FLO1P32768 1537 aa1.24□□□□□ -2.21
MSN4YKL062W YDR034C-AP0C289 58 aa1.19□□□□□ -2.22
MSN4YKL062W UTP20P35194 2493 aaKnown RBP1.18□□□□□ -2.22
MSN4YKL062W RPS29AP41057 56 aaKnown RBP1.16□□□□□ -2.22
MSN4YKL062W TOR1P35169 2470 aa1.15□□□□□ -2.22
MSN4YKL062W YHR073W-AP0C5N7 58 aa1.14□□□□□ -2.23
MSN4YKL062W PMP3P87284 55 aa1.01□□□□□ -2.25
MSN4YKL062W MEC1P38111 2368 aa0.99□□□□□ -2.25
MSN4YKL062W HOR7Q05827 59 aa0.97□□□□□ -2.25
MSN4YKL062W NCE101Q02820 53 aa0.95□□□□□ -2.26
MSN4YKL062W YHR050W-AQ05451 56 aa0.94□□□□□ -2.26
MSN4YKL062W TRA1P38811 3744 aa0.92□□□□□ -2.26
MSN4YKL062W TOR2P32600 2474 aaKnown RBP0.92□□□□□ -2.26
MSN4YKL062W YML054C-AQ3E809 52 aa0.86□□□□□ -2.27
MSN4YKL062W CSF1Q12150 2958 aa0.85□□□□□ -2.27
MSN4YKL062W Q0017Q9ZZX8 53 aa0.85□□□□□ -2.27
MSN4YKL062W FMP27Q06179 2628 aa0.83□□□□□ -2.28
MSN4YKL062W GCN1P33892 2672 aaKnown RBP0.8□□□□□ -2.28
MSN4YKL062W YPR117WQ06116 2489 aa0.8□□□□□ -2.28
MSN4YKL062W IRA1P18963 3092 aa0.73□□□□□ -2.29
MSN4YKL062W DYN1P36022 4092 aa0.7□□□□□ -2.3
MSN4YKL062W TEL1P38110 2787 aa0.69□□□□□ -2.3
MSN4YKL062W YMR105W-AQ8TGS8 64 aa0.68□□□□□ -2.3
MSN4YKL062W TOM1Q03280 3268 aa0.67□□□□□ -2.3
MSN4YKL062W RPL39P04650 51 aa0.67□□□□□ -2.3
MSN4YKL062W IRA2P19158 3079 aa0.64□□□□□ -2.31
MSN4YKL062W YDR034W-BQ6Q5X2 51 aa0.64□□□□□ -2.31
MSN4YKL062W VPS13Q07878 3144 aa0.64□□□□□ -2.31
MSN4YKL062W YIL046W-AQ3E7Z4 54 aa0.63□□□□□ -2.31
MSN4YKL062W YBR056W-AI2HB52 66 aa0.63□□□□□ -2.31
MSN4YKL062W YLL066W-BQ8TGJ7 56 aa0.59□□□□□ -2.31
MSN4YKL062W NUM1Q00402 2748 aa0.56□□□□□ -2.32
MSN4YKL062W CUP1-1P0CX80 61 aa0.56□□□□□ -2.32
MSN4YKL062W CUP1-2P0CX81 61 aa0.56□□□□□ -2.32
MSN4YKL062W Q0297Q9ZZV8 51 aa0.5□□□□□ -2.33
MSN4YKL062W MDN1Q12019 4910 aaKnown RBP0.48□□□□□ -2.33
Retrieved 63 of 5,963 RNA–protein pairs in 28.8 ms